BLASTX nr result

ID: Bupleurum21_contig00016721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016721
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN88681.1| VTC2-like protein [Malus x domestica]                  154   1e-49
ref|XP_004139797.1| PREDICTED: GDP-L-galactose phosphorylase 1-l...   150   1e-48
ref|XP_002867538.1| hypothetical protein ARALYDRAFT_492115 [Arab...   149   6e-48
gb|ADV59925.1| putative GDP-L-galactose-pyrophosphatase [Citrus ...   148   1e-47
gb|AAL07213.1| unknown protein [Arabidopsis thaliana]                 147   3e-47

>gb|ACN88681.1| VTC2-like protein [Malus x domestica]
          Length = 446

 Score =  154 bits (388), Expect(2) = 1e-49
 Identities = 71/79 (89%), Positives = 78/79 (98%)
 Frame = +3

Query: 360 KEPPVAFLESLLLGEWEDRMQKGLFRYDVTACQTKVIPGVHGFIAQLNEGRHLKKRPTEF 539
           +EPPVAFL+SLLLGEWEDRMQ+GLFRYDVTAC+TKVIPG +GFIAQLNEGRHLKKRPTEF
Sbjct: 67  REPPVAFLDSLLLGEWEDRMQRGLFRYDVTACETKVIPGQYGFIAQLNEGRHLKKRPTEF 126

Query: 540 RVDKVLQPFDATKFNFTKV 596
           RVDKVLQPFD++KFNFTKV
Sbjct: 127 RVDKVLQPFDSSKFNFTKV 145



 Score = 68.2 bits (165), Expect(2) = 1e-49
 Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 3/46 (6%)
 Frame = +1

Query: 151 MLKIKRVPTVVSNHQN---EDGEGVTSGCGRNCLNKCCLPGSKLPL 279
           ML+IKRVPTVVSN+Q    E+G     GCGRNCLN+CC+PG+KLPL
Sbjct: 1   MLRIKRVPTVVSNYQKDEAEEGARRVEGCGRNCLNQCCIPGAKLPL 46


>ref|XP_004139797.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Cucumis sativus]
           gi|449507444|ref|XP_004163034.1| PREDICTED:
           GDP-L-galactose phosphorylase 1-like [Cucumis sativus]
          Length = 445

 Score =  150 bits (379), Expect(2) = 1e-48
 Identities = 70/77 (90%), Positives = 74/77 (96%)
 Frame = +3

Query: 366 PPVAFLESLLLGEWEDRMQKGLFRYDVTACQTKVIPGVHGFIAQLNEGRHLKKRPTEFRV 545
           PPVAFL+SLLLGEWEDRMQ+GLFRYDVTAC+TKVIPG +GFIAQLNEGRHLKKRPTEFRV
Sbjct: 69  PPVAFLDSLLLGEWEDRMQRGLFRYDVTACETKVIPGKYGFIAQLNEGRHLKKRPTEFRV 128

Query: 546 DKVLQPFDATKFNFTKV 596
           DKVLQPFD  KFNFTKV
Sbjct: 129 DKVLQPFDGNKFNFTKV 145



 Score = 68.6 bits (166), Expect(2) = 1e-48
 Identities = 30/45 (66%), Positives = 39/45 (86%), Gaps = 2/45 (4%)
 Frame = +1

Query: 151 MLKIKRVPTVVSNHQNEDGEGVT--SGCGRNCLNKCCLPGSKLPL 279
           ML+IKRVPTVVSN+Q ++ E V+  +GCGRNCLNKCC+ G+K+PL
Sbjct: 1   MLRIKRVPTVVSNYQEDETENVSRSTGCGRNCLNKCCIEGAKIPL 45


>ref|XP_002867538.1| hypothetical protein ARALYDRAFT_492115 [Arabidopsis lyrata subsp.
           lyrata] gi|297313374|gb|EFH43797.1| hypothetical protein
           ARALYDRAFT_492115 [Arabidopsis lyrata subsp. lyrata]
          Length = 444

 Score =  149 bits (376), Expect(2) = 6e-48
 Identities = 69/79 (87%), Positives = 75/79 (94%)
 Frame = +3

Query: 360 KEPPVAFLESLLLGEWEDRMQKGLFRYDVTACQTKVIPGVHGFIAQLNEGRHLKKRPTEF 539
           KEPPVAFLESL+LGEWEDR Q+GLFRYDVTAC+TKVIPG +GF+AQLNEGRHLKKRPTEF
Sbjct: 65  KEPPVAFLESLVLGEWEDRFQRGLFRYDVTACETKVIPGKYGFVAQLNEGRHLKKRPTEF 124

Query: 540 RVDKVLQPFDATKFNFTKV 596
           RVDKVLQ FD +KFNFTKV
Sbjct: 125 RVDKVLQSFDGSKFNFTKV 143



 Score = 67.4 bits (163), Expect(2) = 6e-48
 Identities = 29/43 (67%), Positives = 35/43 (81%)
 Frame = +1

Query: 151 MLKIKRVPTVVSNHQNEDGEGVTSGCGRNCLNKCCLPGSKLPL 279
           MLKIKRVPTVVSN+Q +DG   + GCGRNCL  CC+ G++LPL
Sbjct: 1   MLKIKRVPTVVSNYQKDDGADDSVGCGRNCLGACCINGARLPL 43


>gb|ADV59925.1| putative GDP-L-galactose-pyrophosphatase [Citrus unshiu]
          Length = 455

 Score =  148 bits (374), Expect(2) = 1e-47
 Identities = 68/78 (87%), Positives = 75/78 (96%)
 Frame = +3

Query: 363 EPPVAFLESLLLGEWEDRMQKGLFRYDVTACQTKVIPGVHGFIAQLNEGRHLKKRPTEFR 542
           EPPVAFL+SL+LGEWEDR+Q+GLFRYDVTAC+T+VIPG +GFIAQLNEGRHLKKRPTEFR
Sbjct: 74  EPPVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFR 133

Query: 543 VDKVLQPFDATKFNFTKV 596
           VDKVLQPFD  KFNFTKV
Sbjct: 134 VDKVLQPFDGNKFNFTKV 151



 Score = 67.4 bits (163), Expect(2) = 1e-47
 Identities = 32/49 (65%), Positives = 37/49 (75%), Gaps = 6/49 (12%)
 Frame = +1

Query: 151 MLKIKRVPTVVSNHQNEDGEGVT------SGCGRNCLNKCCLPGSKLPL 279
           ML+IKRVPTVVSN+Q E+ E         SGCGRNCLNKCC+ G+KLPL
Sbjct: 2   MLRIKRVPTVVSNYQKEETEEAAAAARRVSGCGRNCLNKCCIQGAKLPL 50


>gb|AAL07213.1| unknown protein [Arabidopsis thaliana]
          Length = 442

 Score =  147 bits (371), Expect(2) = 3e-47
 Identities = 68/78 (87%), Positives = 74/78 (94%)
 Frame = +3

Query: 363 EPPVAFLESLLLGEWEDRMQKGLFRYDVTACQTKVIPGVHGFIAQLNEGRHLKKRPTEFR 542
           EPPVAFLESL+LGEWEDR Q+GLFRYDVTAC+TKVIPG +GF+AQLNEGRHLKKRPTEFR
Sbjct: 64  EPPVAFLESLVLGEWEDRFQRGLFRYDVTACETKVIPGKYGFVAQLNEGRHLKKRPTEFR 123

Query: 543 VDKVLQPFDATKFNFTKV 596
           VDKVLQ FD +KFNFTKV
Sbjct: 124 VDKVLQSFDGSKFNFTKV 141



 Score = 67.0 bits (162), Expect(2) = 3e-47
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = +1

Query: 151 MLKIKRVPTVVSNHQNEDGEGVTSGCGRNCLNKCCLPGSKLPL 279
           MLKIKRVPTVVSN+Q +DG     GCGRNCL  CCL G++LPL
Sbjct: 1   MLKIKRVPTVVSNYQKDDGAEDPVGCGRNCLGACCLNGARLPL 43


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