BLASTX nr result

ID: Bupleurum21_contig00016718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016718
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15119.3| unnamed protein product [Vitis vinifera]              166   1e-38
ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256...   166   1e-38
emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]   165   2e-38
gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]      159   2e-36
gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]      158   3e-36

>emb|CBI15119.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  166 bits (419), Expect = 1e-38
 Identities = 80/122 (65%), Positives = 103/122 (84%)
 Frame = -3

Query: 1019 MALISRIGSMLKQARFKDVDAKASISNLSLYQTVRCFSSSKLFVGGLPYATDEQSLREEF 840
            MA   ++G++L+Q   K V+++ S+SN S+YQ +RC SSSKLF+GGL Y+TD+ SLRE F
Sbjct: 1    MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60

Query: 839  SQHGEVIEARVIMDRQTGRSRGFGFVKFTSSEEASSAKQALDGQDIQGRRVKVDFATDRP 660
             ++GEVIEARVI+DR+TGRSRGFGFV FTSSEEASSA QALDGQD+ GRRV+V++ATDR 
Sbjct: 61   HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120

Query: 659  RA 654
            R+
Sbjct: 121  RS 122


>ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
          Length = 277

 Score =  166 bits (419), Expect = 1e-38
 Identities = 80/122 (65%), Positives = 103/122 (84%)
 Frame = -3

Query: 1019 MALISRIGSMLKQARFKDVDAKASISNLSLYQTVRCFSSSKLFVGGLPYATDEQSLREEF 840
            MA   ++G++L+Q   K V+++ S+SN S+YQ +RC SSSKLF+GGL Y+TD+ SLRE F
Sbjct: 1    MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60

Query: 839  SQHGEVIEARVIMDRQTGRSRGFGFVKFTSSEEASSAKQALDGQDIQGRRVKVDFATDRP 660
             ++GEVIEARVI+DR+TGRSRGFGFV FTSSEEASSA QALDGQD+ GRRV+V++ATDR 
Sbjct: 61   HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120

Query: 659  RA 654
            R+
Sbjct: 121  RS 122


>emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
          Length = 272

 Score =  165 bits (418), Expect = 2e-38
 Identities = 80/122 (65%), Positives = 103/122 (84%)
 Frame = -3

Query: 1019 MALISRIGSMLKQARFKDVDAKASISNLSLYQTVRCFSSSKLFVGGLPYATDEQSLREEF 840
            MA   ++G++L+Q   K V+++ S+SN S+YQ +RC SSSKLF+GGL Y+TD+ SLRE F
Sbjct: 1    MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60

Query: 839  SQHGEVIEARVIMDRQTGRSRGFGFVKFTSSEEASSAKQALDGQDIQGRRVKVDFATDRP 660
             ++GEVIEARVI+DR+TGRSRGFGFV FTSSEEASSA QALDGQD+ GRRV+V++ATDR 
Sbjct: 61   YKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120

Query: 659  RA 654
            R+
Sbjct: 121  RS 122


>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
          Length = 277

 Score =  159 bits (401), Expect = 2e-36
 Identities = 78/122 (63%), Positives = 99/122 (81%)
 Frame = -3

Query: 1019 MALISRIGSMLKQARFKDVDAKASISNLSLYQTVRCFSSSKLFVGGLPYATDEQSLREEF 840
            MA  +R+GS+LKQ+  K  + + S SN SL+Q +R  SSSKLFVGGL Y TDE SL+E F
Sbjct: 1    MAFFNRVGSILKQSVSKHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAF 60

Query: 839  SQHGEVIEARVIMDRQTGRSRGFGFVKFTSSEEASSAKQALDGQDIQGRRVKVDFATDRP 660
            SQ+G+VIEARVIMDR TGRSRGFGF+ F SSEEA+SA QA+DGQD+ GRR++V++AT++ 
Sbjct: 61   SQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYATEKR 120

Query: 659  RA 654
            RA
Sbjct: 121  RA 122


>gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
          Length = 339

 Score =  158 bits (399), Expect = 3e-36
 Identities = 77/121 (63%), Positives = 100/121 (82%)
 Frame = -3

Query: 1019 MALISRIGSMLKQARFKDVDAKASISNLSLYQTVRCFSSSKLFVGGLPYATDEQSLREEF 840
            MA +++IG++LK    K+ + + S SN SL+QT+R  SSSKLFVGGL Y TDE SL+E F
Sbjct: 1    MAFLNKIGNILKHGVGKNTNLELSASNGSLFQTIRSMSSSKLFVGGLSYGTDESSLKETF 60

Query: 839  SQHGEVIEARVIMDRQTGRSRGFGFVKFTSSEEASSAKQALDGQDIQGRRVKVDFATDRP 660
            SQ+GEVIEARVI+DR+TGRSRGFGF+ F SSEEA+SA QA+DGQD+ GRR+KV++AT++ 
Sbjct: 61   SQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQAMDGQDLHGRRIKVNYATEKR 120

Query: 659  R 657
            R
Sbjct: 121  R 121


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