BLASTX nr result

ID: Bupleurum21_contig00016705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016705
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527406.1| WD-repeat protein, putative [Ricinus communi...   337   7e-91
gb|ABB54381.2| FVE [Ipomoea nil]                                      336   2e-90
gb|AEF01212.1| FVE [x Doritaenopsis hybrid cultivar]                  332   2e-89
ref|XP_003632850.1| PREDICTED: WD-40 repeat-containing protein M...   332   4e-89
emb|CAN70589.1| hypothetical protein VITISV_026731 [Vitis vinifera]   332   4e-89

>ref|XP_002527406.1| WD-repeat protein, putative [Ricinus communis]
           gi|223533216|gb|EEF34972.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 466

 Score =  337 bits (865), Expect = 7e-91
 Identities = 155/208 (74%), Positives = 180/208 (86%), Gaps = 13/208 (6%)
 Frame = +1

Query: 1   RGTFQGHENTVEDVQFCPSSAQEFCSVGDDSCLIFWDARSGFTPAVKVEKAHDADLHCVD 180
           RG FQGHE+TVEDVQFCPSSA EFCSVGDDSCLI WDAR+G +P VKVEKAH++DLHCVD
Sbjct: 240 RGIFQGHEDTVEDVQFCPSSAHEFCSVGDDSCLILWDARTGSSPVVKVEKAHNSDLHCVD 299

Query: 181 WNSHDVNFVLTGSADNTVRMFDRRNLTSG----PVNIFEGHSQAVLCVQWSPDRSSVFGS 348
           WN HDVNF+LTGSADNT+ MFDRR+LTSG    P++ FEGHS AVLCVQWSPD SSVFGS
Sbjct: 300 WNPHDVNFILTGSADNTIHMFDRRSLTSGGLGSPIHKFEGHSAAVLCVQWSPDNSSVFGS 359

Query: 349 SAEDGIMNIWDHQLIGQQDNQ---------KGLFFRHAGHRDKVVDFHFNSADPWTIVSV 501
           SAEDG++NIWD + IG++ +           GLFF+HAGHRDK+VDFH+NS+DPWTIVSV
Sbjct: 360 SAEDGLLNIWDFEKIGKKQDSAGLNLPSAPPGLFFQHAGHRDKIVDFHWNSSDPWTIVSV 419

Query: 502 SDDCESTNGGGTLQIWRMLDLLYKPEDE 585
           SDDCEST+GGGTLQIWRM+DL+Y+PE+E
Sbjct: 420 SDDCESTSGGGTLQIWRMIDLIYRPEEE 447


>gb|ABB54381.2| FVE [Ipomoea nil]
          Length = 454

 Score =  336 bits (862), Expect = 2e-90
 Identities = 155/203 (76%), Positives = 178/203 (87%), Gaps = 7/203 (3%)
 Frame = +1

Query: 1   RGTFQGHENTVEDVQFCPSSAQEFCSVGDDSCLIFWDARSGFTPAVKVEKAHDADLHCVD 180
           RG FQGHE+TVEDVQFCPSS+QEFCSVGDDSCLI WDAR G +P VKVEKAH+ADLHCVD
Sbjct: 234 RGIFQGHEDTVEDVQFCPSSSQEFCSVGDDSCLILWDARVGTSPVVKVEKAHNADLHCVD 293

Query: 181 WNSHDVNFVLTGSADNTVRMFDRRNLTS----GPVNIFEGHSQAVLCVQWSPDRSSVFGS 348
           WN HD NF++TGSADN+VR+FDRR+LTS     PV+IFE H  AVLCVQW PDRSSVFGS
Sbjct: 294 WNPHDGNFIITGSADNSVRLFDRRSLTSNGVGSPVHIFENHKAAVLCVQWCPDRSSVFGS 353

Query: 349 SAEDGIMNIWDHQLIGQQDNQ---KGLFFRHAGHRDKVVDFHFNSADPWTIVSVSDDCES 519
           +AEDG +NIWD+  +G++DN+    GLFF+HAGHRDK+VDFH+N ADPWTIVSVSDDC+S
Sbjct: 354 TAEDGRLNIWDYDKVGEKDNETPAPGLFFQHAGHRDKIVDFHWNVADPWTIVSVSDDCDS 413

Query: 520 TNGGGTLQIWRMLDLLYKPEDEA 588
           T GGGTLQIWRMLDLLY+PE+EA
Sbjct: 414 TGGGGTLQIWRMLDLLYRPEEEA 436


>gb|AEF01212.1| FVE [x Doritaenopsis hybrid cultivar]
          Length = 468

 Score =  332 bits (852), Expect = 2e-89
 Identities = 151/208 (72%), Positives = 181/208 (87%), Gaps = 13/208 (6%)
 Frame = +1

Query: 1   RGTFQGHENTVEDVQFCPSSAQEFCSVGDDSCLIFWDARSGFTPAVKVEKAHDADLHCVD 180
           RG +QGHE+TVEDVQFCPSSA+EFCSVGDDSCLI WDARSG +P VKVEKAH+ DLHCVD
Sbjct: 242 RGVYQGHEDTVEDVQFCPSSAEEFCSVGDDSCLILWDARSGTSPVVKVEKAHNEDLHCVD 301

Query: 181 WNSHDVNFVLTGSADNTVRMFDRRNLTSG----PVNIFEGHSQAVLCVQWSPDRSSVFGS 348
           WN HDVN++LTGSADN+VRMFDRRNL+SG    PV+ FEGHS AVLCVQWSPD++SVFGS
Sbjct: 302 WNPHDVNYILTGSADNSVRMFDRRNLSSGGVGSPVHKFEGHSAAVLCVQWSPDKASVFGS 361

Query: 349 SAEDGIMNIWDHQLIGQQ---------DNQKGLFFRHAGHRDKVVDFHFNSADPWTIVSV 501
           +AEDG +N+WD++ +G++         ++  GLFF+HAGHRDKVVDFH+N++DPWTIVSV
Sbjct: 362 AAEDGFLNVWDYEKVGKKRERTGTRTTNSPPGLFFQHAGHRDKVVDFHWNASDPWTIVSV 421

Query: 502 SDDCESTNGGGTLQIWRMLDLLYKPEDE 585
           SDDC+ST GGGTLQIWRM DL+Y+PE+E
Sbjct: 422 SDDCQSTGGGGTLQIWRMSDLIYRPEEE 449


>ref|XP_003632850.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Vitis
           vinifera] gi|297743080|emb|CBI35947.3| unnamed protein
           product [Vitis vinifera]
          Length = 453

 Score =  332 bits (850), Expect = 4e-89
 Identities = 152/202 (75%), Positives = 178/202 (88%), Gaps = 7/202 (3%)
 Frame = +1

Query: 1   RGTFQGHENTVEDVQFCPSSAQEFCSVGDDSCLIFWDARSGFTPAVKVEKAHDADLHCVD 180
           RG +QGH++TVEDVQFCP SAQEFCSVGDDSCLI WDARSG TPA+KVEKAH+ADLHCVD
Sbjct: 235 RGIYQGHDDTVEDVQFCPLSAQEFCSVGDDSCLILWDARSGTTPAIKVEKAHNADLHCVD 294

Query: 181 WNSHDVNFVLTGSADNTVRMFDRRNLTSG----PVNIFEGHSQAVLCVQWSPDRSSVFGS 348
           WN HD+N +LTGSADNTVRMFDRR LTSG    P++ FEGH+ AVLCVQWSPD++S+FGS
Sbjct: 295 WNPHDINLILTGSADNTVRMFDRRKLTSGGIGSPIHTFEGHTAAVLCVQWSPDKASIFGS 354

Query: 349 SAEDGIMNIWDHQLIGQQ---DNQKGLFFRHAGHRDKVVDFHFNSADPWTIVSVSDDCES 519
           SAEDGI+N+W+H+ I ++   +   GLFFRHAGHRDKVVDFH+N++DPWTIVSVSDD ES
Sbjct: 355 SAEDGILNLWNHEKIDKKQAPNAPPGLFFRHAGHRDKVVDFHWNASDPWTIVSVSDDGES 414

Query: 520 TNGGGTLQIWRMLDLLYKPEDE 585
           T GGGTLQIWRM+DL+Y+ EDE
Sbjct: 415 TGGGGTLQIWRMIDLIYRNEDE 436


>emb|CAN70589.1| hypothetical protein VITISV_026731 [Vitis vinifera]
          Length = 462

 Score =  332 bits (850), Expect = 4e-89
 Identities = 152/202 (75%), Positives = 178/202 (88%), Gaps = 7/202 (3%)
 Frame = +1

Query: 1   RGTFQGHENTVEDVQFCPSSAQEFCSVGDDSCLIFWDARSGFTPAVKVEKAHDADLHCVD 180
           RG +QGH++TVEDVQFCP SAQEFCSVGDDSCLI WDARSG TPA+KVEKAH+ADLHCVD
Sbjct: 244 RGIYQGHDDTVEDVQFCPLSAQEFCSVGDDSCLILWDARSGTTPAIKVEKAHNADLHCVD 303

Query: 181 WNSHDVNFVLTGSADNTVRMFDRRNLTSG----PVNIFEGHSQAVLCVQWSPDRSSVFGS 348
           WN HD+N +LTGSADNTVRMFDRR LTSG    P++ FEGH+ AVLCVQWSPD++S+FGS
Sbjct: 304 WNPHDINLILTGSADNTVRMFDRRKLTSGGIGSPIHTFEGHTAAVLCVQWSPDKASIFGS 363

Query: 349 SAEDGIMNIWDHQLIGQQ---DNQKGLFFRHAGHRDKVVDFHFNSADPWTIVSVSDDCES 519
           SAEDGI+N+W+H+ I ++   +   GLFFRHAGHRDKVVDFH+N++DPWTIVSVSDD ES
Sbjct: 364 SAEDGILNLWNHEKIDKKQAPNAPPGLFFRHAGHRDKVVDFHWNASDPWTIVSVSDDGES 423

Query: 520 TNGGGTLQIWRMLDLLYKPEDE 585
           T GGGTLQIWRM+DL+Y+ EDE
Sbjct: 424 TGGGGTLQIWRMIDLIYRNEDE 445


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