BLASTX nr result

ID: Bupleurum21_contig00016704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016704
         (1426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32067.3| unnamed protein product [Vitis vinifera]              197   7e-48
ref|XP_002267941.1| PREDICTED: microtubule-associated protein SP...   197   7e-48
ref|XP_002315702.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-43
emb|CBI15107.3| unnamed protein product [Vitis vinifera]              167   6e-39
ref|XP_002280600.1| PREDICTED: microtubule-associated protein TO...   167   6e-39

>emb|CBI32067.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  197 bits (500), Expect = 7e-48
 Identities = 139/373 (37%), Positives = 205/373 (54%), Gaps = 23/373 (6%)
 Frame = -1

Query: 1426 WKTIVAEED--LSLSHSSEGHPENGSELNSSSISKGLREIGVDTHKTKKTILTAHLPPSY 1253
            WK +  + +  L LS S     +NG+       SK   ++G +T + KK I T   PPS 
Sbjct: 289  WKELPCDSNGLLPLSPSKASSKDNGAGGCFPPASKISCDVGFETPQPKKIIPTRS-PPS- 346

Query: 1252 GTPKSIASKTSKRKPI---------------VHFKKPFDLKADIAGPQPTCLKMGSEDEL 1118
                S+ +   KR P+               +  KKP D K ++A P P+  K+  ED+L
Sbjct: 347  --DNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVPHPSSSKVACEDDL 404

Query: 1117 MVKNSRLSGSVYDKNCTISKQETKQVLFNKSRDEKSNKVGGLRSMSRVVPFIEDETCGPN 938
              +   +S S  + NC  S+ ET +VLF+K  +EK +K G LRS SR+VPF E+      
Sbjct: 405  KRRYLVVSDSEENGNCGDSRPETNRVLFSKISNEKMHKFGCLRSGSRIVPFHENNNSESA 464

Query: 937  EIDEISYGDN-YKNNKEAENLSLIQEQLVHIENQQSSLFALLQRYIGSSQSGMNSLQTRV 761
             +D  +  +  Y+N K+ E+LSLI++QL+ IENQQSS+  LLQR+IG+SQSG+NSL+TRV
Sbjct: 465  VVDSNATEEEIYENQKDIEDLSLIRKQLIQIENQQSSMLNLLQRFIGNSQSGINSLETRV 524

Query: 760  NGLEMALDQISQNIA-XXXXXXXXXXXGNTCCMLPRAEFLSPKFWKKTDAQYASSRVSFS 584
            NGLEM L++IS ++A            GNTCC LP AEFLS KFWK+T+  + +SR S +
Sbjct: 525  NGLEMVLEEISFDLAISSGRVSNSDSAGNTCCKLPGAEFLSSKFWKRTEG-HTTSRFSST 583

Query: 583  GRKQLSYVVSDIPHKDAG----AEKVKQDNPSSPLASTFKGPNGYSSTMRKETTPGFEKV 416
            G  Q    ++++P+K A      +K++  N    +A+     +G S T+    +P  + +
Sbjct: 584  GSIQALTTINNMPNKYASNMVDEQKLQHQNLDGFVANPLADIHGTSRTLIDGASPATQTM 643

Query: 415  LVPHCNGLDRRSA 377
             V     L RR A
Sbjct: 644  PV----NLSRRLA 652


>ref|XP_002267941.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis
            vinifera]
          Length = 654

 Score =  197 bits (500), Expect = 7e-48
 Identities = 139/373 (37%), Positives = 205/373 (54%), Gaps = 23/373 (6%)
 Frame = -1

Query: 1426 WKTIVAEED--LSLSHSSEGHPENGSELNSSSISKGLREIGVDTHKTKKTILTAHLPPSY 1253
            WK +  + +  L LS S     +NG+       SK   ++G +T + KK I T   PPS 
Sbjct: 290  WKELPCDSNGLLPLSPSKASSKDNGAGGCFPPASKISCDVGFETPQPKKIIPTRS-PPS- 347

Query: 1252 GTPKSIASKTSKRKPI---------------VHFKKPFDLKADIAGPQPTCLKMGSEDEL 1118
                S+ +   KR P+               +  KKP D K ++A P P+  K+  ED+L
Sbjct: 348  --DNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVPHPSSSKVACEDDL 405

Query: 1117 MVKNSRLSGSVYDKNCTISKQETKQVLFNKSRDEKSNKVGGLRSMSRVVPFIEDETCGPN 938
              +   +S S  + NC  S+ ET +VLF+K  +EK +K G LRS SR+VPF E+      
Sbjct: 406  KRRYLVVSDSEENGNCGDSRPETNRVLFSKISNEKMHKFGCLRSGSRIVPFHENNNSESA 465

Query: 937  EIDEISYGDN-YKNNKEAENLSLIQEQLVHIENQQSSLFALLQRYIGSSQSGMNSLQTRV 761
             +D  +  +  Y+N K+ E+LSLI++QL+ IENQQSS+  LLQR+IG+SQSG+NSL+TRV
Sbjct: 466  VVDSNATEEEIYENQKDIEDLSLIRKQLIQIENQQSSMLNLLQRFIGNSQSGINSLETRV 525

Query: 760  NGLEMALDQISQNIA-XXXXXXXXXXXGNTCCMLPRAEFLSPKFWKKTDAQYASSRVSFS 584
            NGLEM L++IS ++A            GNTCC LP AEFLS KFWK+T+  + +SR S +
Sbjct: 526  NGLEMVLEEISFDLAISSGRVSNSDSAGNTCCKLPGAEFLSSKFWKRTEG-HTTSRFSST 584

Query: 583  GRKQLSYVVSDIPHKDAG----AEKVKQDNPSSPLASTFKGPNGYSSTMRKETTPGFEKV 416
            G  Q    ++++P+K A      +K++  N    +A+     +G S T+    +P  + +
Sbjct: 585  GSIQALTTINNMPNKYASNMVDEQKLQHQNLDGFVANPLADIHGTSRTLIDGASPATQTM 644

Query: 415  LVPHCNGLDRRSA 377
             V     L RR A
Sbjct: 645  PV----NLSRRLA 653


>ref|XP_002315702.1| predicted protein [Populus trichocarpa] gi|222864742|gb|EEF01873.1|
            predicted protein [Populus trichocarpa]
          Length = 631

 Score =  181 bits (459), Expect = 4e-43
 Identities = 118/262 (45%), Positives = 159/262 (60%), Gaps = 14/262 (5%)
 Frame = -1

Query: 1342 SSISKGLREIGVDTHKTKKTILTAHLPPSYGTPKSIASKTSKRKPIVHFKKPFDL----- 1178
            SS SK  +++G  T  +KKT+     PPS  +P + A K S  K   H  K   L     
Sbjct: 308  SSASKNSKDVGFRTPLSKKTVPAIRFPPSDASPVTAAKKQSPAKSNDHNSKTGMLHKLGH 367

Query: 1177 ------KADIAGPQPTCLKMGSEDELMVKNSRLSGSVYDKNCTISKQETKQVLFNKSRDE 1016
                  K +IA P+    K+  +D     +S + GS  + + T S +ET++VLF   RD+
Sbjct: 368  DRHSAWKIEIATPEG---KVSGDDTR--NDSEVLGSGQNGDGTSSMRETRRVLFGSIRDD 422

Query: 1015 KSNKVGGLRSMSRVVPFIEDETCGPNEIDEISYG--DNYKNNKEAENLSLIQEQLVHIEN 842
            K NK GGL+S SRVVPF EDE C  N++ E+S    D Y+N+K+ E+LSLI+EQL+ IEN
Sbjct: 423  KWNKFGGLKSGSRVVPFQEDENCY-NKVVEVSSSAEDFYENHKDYEDLSLIREQLIQIEN 481

Query: 841  QQSSLFALLQRYIGSSQSGMNSLQTRVNGLEMALDQISQNIA-XXXXXXXXXXXGNTCCM 665
            QQSSL  LLQ YIG SQ G+NSL+TRV+GLEMA+++IS ++A             NTCC 
Sbjct: 482  QQSSLLDLLQGYIGRSQVGINSLETRVHGLEMAVNEISYDLAVSSGRIPKTNYAENTCCN 541

Query: 664  LPRAEFLSPKFWKKTDAQYASS 599
            LP AEFLS KFW +T+ +Y S+
Sbjct: 542  LPGAEFLSSKFW-RTECRYVSN 562


>emb|CBI15107.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  167 bits (423), Expect = 6e-39
 Identities = 117/320 (36%), Positives = 170/320 (53%), Gaps = 13/320 (4%)
 Frame = -1

Query: 1426 WKTI------VAEEDLSLSHSSEGHPENGSELNSSSISKGLREIGVDTHKTKKTILTAHL 1265
            WK I      V+    S S S E   +    L S +   G  E+ +   K+  T ++  L
Sbjct: 163  WKEIPDVSNDVSPPPQSQSSSKENASDGRYPLESRNSCTGGSEVPLMRKKSIPTSISPQL 222

Query: 1264 PPSYGT------PKSIASKTSKRKPIVHFKKPFDLKADIAGPQPTCLKMGSEDELMVKNS 1103
              S  T      P   +     RK  +  KK  DLK ++  P    +    ED L  K+ 
Sbjct: 223  NSSSATTVRRRGPVDKSGSAMFRK--LERKKASDLKVEVTAPHAPSVMRIHEDGLKKKDE 280

Query: 1102 RLSGSVYDKNCTISKQETKQVLFNKSRDEKSNKVGGLRSMSRVVPFIEDETCGPNEIDEI 923
            +      ++    +K ET++VLF K+ D+K NK GG RS SRVVP  E+ +    E+   
Sbjct: 281  KAPERGENEKNRFTKPETRRVLFTKNSDDKMNKFGGFRSGSRVVPCQEENSETTVEVSNT 340

Query: 922  SYGDNYKNNKEAENLSLIQEQLVHIENQQSSLFALLQRYIGSSQSGMNSLQTRVNGLEMA 743
            +    ++N+KE E+LSLI++QLV IENQQSSL  LL++++GSSQ+G+ SL+TRV+GLE+A
Sbjct: 341  TEVP-HRNHKECEDLSLIRKQLVQIENQQSSLLNLLEKFMGSSQNGLRSLETRVHGLELA 399

Query: 742  LDQISQNIAXXXXXXXXXXXGN-TCCMLPRAEFLSPKFWKKTDAQYASSRVSFSGRKQLS 566
            LD+IS ++A              TCCMLP A+FLS KFW+KT+ + ++SR S S   Q  
Sbjct: 400  LDEISFDLAVSNRRMSSTDTAGATCCMLPGADFLSSKFWRKTEGRGSTSRFSPSHATQSG 459

Query: 565  YVVSDIPHKDAGAEKVKQDN 506
              +  I  K+  A   K +N
Sbjct: 460  TAMRYIAGKNDNAGTFKSEN 479


>ref|XP_002280600.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Vitis
            vinifera]
          Length = 638

 Score =  167 bits (423), Expect = 6e-39
 Identities = 117/320 (36%), Positives = 170/320 (53%), Gaps = 13/320 (4%)
 Frame = -1

Query: 1426 WKTI------VAEEDLSLSHSSEGHPENGSELNSSSISKGLREIGVDTHKTKKTILTAHL 1265
            WK I      V+    S S S E   +    L S +   G  E+ +   K+  T ++  L
Sbjct: 280  WKEIPDVSNDVSPPPQSQSSSKENASDGRYPLESRNSCTGGSEVPLMRKKSIPTSISPQL 339

Query: 1264 PPSYGT------PKSIASKTSKRKPIVHFKKPFDLKADIAGPQPTCLKMGSEDELMVKNS 1103
              S  T      P   +     RK  +  KK  DLK ++  P    +    ED L  K+ 
Sbjct: 340  NSSSATTVRRRGPVDKSGSAMFRK--LERKKASDLKVEVTAPHAPSVMRIHEDGLKKKDE 397

Query: 1102 RLSGSVYDKNCTISKQETKQVLFNKSRDEKSNKVGGLRSMSRVVPFIEDETCGPNEIDEI 923
            +      ++    +K ET++VLF K+ D+K NK GG RS SRVVP  E+ +    E+   
Sbjct: 398  KAPERGENEKNRFTKPETRRVLFTKNSDDKMNKFGGFRSGSRVVPCQEENSETTVEVSNT 457

Query: 922  SYGDNYKNNKEAENLSLIQEQLVHIENQQSSLFALLQRYIGSSQSGMNSLQTRVNGLEMA 743
            +    ++N+KE E+LSLI++QLV IENQQSSL  LL++++GSSQ+G+ SL+TRV+GLE+A
Sbjct: 458  TEVP-HRNHKECEDLSLIRKQLVQIENQQSSLLNLLEKFMGSSQNGLRSLETRVHGLELA 516

Query: 742  LDQISQNIAXXXXXXXXXXXGN-TCCMLPRAEFLSPKFWKKTDAQYASSRVSFSGRKQLS 566
            LD+IS ++A              TCCMLP A+FLS KFW+KT+ + ++SR S S   Q  
Sbjct: 517  LDEISFDLAVSNRRMSSTDTAGATCCMLPGADFLSSKFWRKTEGRGSTSRFSPSHATQSG 576

Query: 565  YVVSDIPHKDAGAEKVKQDN 506
              +  I  K+  A   K +N
Sbjct: 577  TAMRYIAGKNDNAGTFKSEN 596


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