BLASTX nr result

ID: Bupleurum21_contig00016701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016701
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281533.1| PREDICTED: WD40 repeat-containing protein SM...   322   2e-86
ref|XP_002511981.1| WD-repeat protein, putative [Ricinus communi...   314   4e-84
ref|XP_003531308.1| PREDICTED: WD40 repeat-containing protein SM...   314   5e-84
ref|XP_003525021.1| PREDICTED: WD40 repeat-containing protein SM...   312   2e-83
dbj|BAK61827.1| WD-40 repeat family protein [Citrus unshiu]           311   3e-83

>ref|XP_002281533.1| PREDICTED: WD40 repeat-containing protein SMU1 [Vitis vinifera]
           gi|297733734|emb|CBI14981.3| unnamed protein product
           [Vitis vinifera]
          Length = 514

 Score =  322 bits (825), Expect = 2e-86
 Identities = 159/166 (95%), Positives = 165/166 (99%)
 Frame = -2

Query: 500 VADINSGRWDAILPQLSQLKLPRKKLEDLYEQIVLEMIELREMDTARAILRQTQAMGVMK 321
           +ADINSGRWDAILPQ++QLKLPRKKLEDLYEQIVLEMIELRE+DTARAILRQTQAMGVMK
Sbjct: 50  IADINSGRWDAILPQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMK 109

Query: 320 QEEPERYLRLEHLLVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQA 141
           QE+PERYLRLEHLLVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQA
Sbjct: 110 QEQPERYLRLEHLLVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQA 169

Query: 140 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPTSLGHTIKFGKK 3
           LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPT+LGHTIKFG K
Sbjct: 170 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPTTLGHTIKFGTK 215


>ref|XP_002511981.1| WD-repeat protein, putative [Ricinus communis]
           gi|223549161|gb|EEF50650.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 517

 Score =  314 bits (805), Expect = 4e-84
 Identities = 156/166 (93%), Positives = 163/166 (98%)
 Frame = -2

Query: 500 VADINSGRWDAILPQLSQLKLPRKKLEDLYEQIVLEMIELREMDTARAILRQTQAMGVMK 321
           VADINSGRWD+ILPQ+SQLKLPR KLEDLYEQIVLEMIELRE+DTARAILRQTQAMGVMK
Sbjct: 48  VADINSGRWDSILPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMK 107

Query: 320 QEEPERYLRLEHLLVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQA 141
           QE+PERYLRLEHLLVRTYFDP+EAYQDSTKEKRR+QIAQALAAEVSVVPPSRLMALIGQA
Sbjct: 108 QEQPERYLRLEHLLVRTYFDPNEAYQDSTKEKRRSQIAQALAAEVSVVPPSRLMALIGQA 167

Query: 140 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPTSLGHTIKFGKK 3
           LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPT+L HTIKFG K
Sbjct: 168 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPTTLSHTIKFGTK 213


>ref|XP_003531308.1| PREDICTED: WD40 repeat-containing protein SMU1-like [Glycine max]
          Length = 513

 Score =  314 bits (804), Expect = 5e-84
 Identities = 156/166 (93%), Positives = 162/166 (97%)
 Frame = -2

Query: 500 VADINSGRWDAILPQLSQLKLPRKKLEDLYEQIVLEMIELREMDTARAILRQTQAMGVMK 321
           VADINSGRWDAILPQ+SQLKLPR KLEDLYEQIVLEMIELRE+DTARAILRQTQ MGVMK
Sbjct: 49  VADINSGRWDAILPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMK 108

Query: 320 QEEPERYLRLEHLLVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQA 141
           QE+PERYLRLEHLLVRTYFDP+EAYQDSTKEKRRAQIAQALAAEV+VVPPSRLMALIGQA
Sbjct: 109 QEQPERYLRLEHLLVRTYFDPNEAYQDSTKEKRRAQIAQALAAEVTVVPPSRLMALIGQA 168

Query: 140 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPTSLGHTIKFGKK 3
           LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPT+L HTIKFG K
Sbjct: 169 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPTTLSHTIKFGTK 214


>ref|XP_003525021.1| PREDICTED: WD40 repeat-containing protein SMU1-like [Glycine max]
          Length = 513

 Score =  312 bits (799), Expect = 2e-83
 Identities = 154/166 (92%), Positives = 162/166 (97%)
 Frame = -2

Query: 500 VADINSGRWDAILPQLSQLKLPRKKLEDLYEQIVLEMIELREMDTARAILRQTQAMGVMK 321
           VADINSGRWDAILPQ+SQLKLPR KLEDLYEQIVLEMIELRE+DTARAILRQTQ MGVMK
Sbjct: 49  VADINSGRWDAILPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMK 108

Query: 320 QEEPERYLRLEHLLVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQA 141
           QE+PERYLRL+HLLVRTYFDP+EAYQDSTKEKRRAQIAQA+AAEV+VVPPSRLMALIGQA
Sbjct: 109 QEQPERYLRLDHLLVRTYFDPNEAYQDSTKEKRRAQIAQAIAAEVTVVPPSRLMALIGQA 168

Query: 140 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPTSLGHTIKFGKK 3
           LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPT+L HTIKFG K
Sbjct: 169 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPTTLSHTIKFGTK 214


>dbj|BAK61827.1| WD-40 repeat family protein [Citrus unshiu]
          Length = 512

 Score =  311 bits (797), Expect = 3e-83
 Identities = 154/166 (92%), Positives = 162/166 (97%)
 Frame = -2

Query: 500 VADINSGRWDAILPQLSQLKLPRKKLEDLYEQIVLEMIELREMDTARAILRQTQAMGVMK 321
           VADINSGRWDAILPQ++QLKLPR KLEDLYEQIVLEMIELRE+DTARAILRQTQAMGVMK
Sbjct: 48  VADINSGRWDAILPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMK 107

Query: 320 QEEPERYLRLEHLLVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQA 141
           QE+PERYLRLEHLLVRTYFD HEAYQDSTKE+RRAQIAQA+AAEVSVVPPSRLMALIGQA
Sbjct: 108 QEQPERYLRLEHLLVRTYFDAHEAYQDSTKERRRAQIAQAVAAEVSVVPPSRLMALIGQA 167

Query: 140 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPTSLGHTIKFGKK 3
           LKWQQHQGLLPPGTQFDLFRGTAAMKQDV+DMYPT+L HTIKFG K
Sbjct: 168 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTK 213


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