BLASTX nr result

ID: Bupleurum21_contig00016696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016696
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26266.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002278693.1| PREDICTED: uncharacterized protein LOC100257...    94   1e-17
ref|XP_002517124.1| hypothetical protein RCOM_0911910 [Ricinus c...    86   3e-15
ref|XP_002315766.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002311630.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13

>emb|CBI26266.3| unnamed protein product [Vitis vinifera]
          Length = 276

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 9/163 (5%)
 Frame = -2

Query: 476 GDIWTWKVGIRISKKGVYSDTFIYPPLRLQKKSGKKLRFRSKKSIITYLQVEFPEADIAA 297
           GD W+WKVG R++K G Y D +++ P RLQ  S ++  F SK S+  Y+Q + P  +IAA
Sbjct: 92  GDTWSWKVGRRVNKSGFYQDRYLFLPRRLQNSSHRRESFSSKLSLKRYVQKQDPNINIAA 151

Query: 296 FFNSFTWKV-PANVSCSARKAQVTPHPRKVHSRPKSERNRVT-SSTKRRSLRIMSAT--- 132
           FF SF+W+V P  V+ S+   +V P P K   +   +++  T    KRR+ ++   T   
Sbjct: 152 FFGSFSWRVPPKRVTPSSITLEVCPQPGKEVDQEVGKKSPFTLPRRKRRAAKLPVTTIYK 211

Query: 131 RRAKYPSQKFSLSGSDDVIIID----PRDSTTDDSKSANDRDT 15
           R  +  ++ F+   +DD  IID     ++S T D  + + R T
Sbjct: 212 RHTRQSTKWFTRFNADDTGIIDLCSLSKESETSDPTNQDLRST 254


>ref|XP_002278693.1| PREDICTED: uncharacterized protein LOC100257987 [Vitis vinifera]
          Length = 492

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 9/163 (5%)
 Frame = -2

Query: 476 GDIWTWKVGIRISKKGVYSDTFIYPPLRLQKKSGKKLRFRSKKSIITYLQVEFPEADIAA 297
           GD W+WKVG R++K G Y D +++ P RLQ  S ++  F SK S+  Y+Q + P  +IAA
Sbjct: 46  GDTWSWKVGRRVNKSGFYQDRYLFLPRRLQNSSHRRESFSSKLSLKRYVQKQDPNINIAA 105

Query: 296 FFNSFTWKV-PANVSCSARKAQVTPHPRKVHSRPKSERNRVT-SSTKRRSLRIMSAT--- 132
           FF SF+W+V P  V+ S+   +V P P K   +   +++  T    KRR+ ++   T   
Sbjct: 106 FFGSFSWRVPPKRVTPSSITLEVCPQPGKEVDQEVGKKSPFTLPRRKRRAAKLPVTTIYK 165

Query: 131 RRAKYPSQKFSLSGSDDVIIID----PRDSTTDDSKSANDRDT 15
           R  +  ++ F+   +DD  IID     ++S T D  + + R T
Sbjct: 166 RHTRQSTKWFTRFNADDTGIIDLCSLSKESETSDPTNQDLRST 208


>ref|XP_002517124.1| hypothetical protein RCOM_0911910 [Ricinus communis]
           gi|223543759|gb|EEF45287.1| hypothetical protein
           RCOM_0911910 [Ricinus communis]
          Length = 533

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
 Frame = -2

Query: 476 GDIWTWKVGIRISKKGVYSDTFIYPPLRLQKKSGKKLRFRSKKSIITYLQVEFPEADIAA 297
           GDIWTW+VG R +  G + D F+Y P RL K++     F SK ++  Y+   FP AD+ A
Sbjct: 96  GDIWTWRVGRRFNTSGYFQDRFLYIPKRLGKQT-----FASKNAVANYITSNFPGADVDA 150

Query: 296 FFNSFTWKVPANVSCSARKAQVTPHP--RKVHSRPKSERNRVTSS-TKRRSLRIMSAT 132
           FF SF WK+P  V    +     P P   KV  + + + N V SS  KRRS    S+T
Sbjct: 151 FFASFAWKIPVKVQSPTKVEPAPPLPPEEKVTGQEEEKANNVHSSLRKRRSTVTASST 208


>ref|XP_002315766.1| predicted protein [Populus trichocarpa] gi|222864806|gb|EEF01937.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/94 (40%), Positives = 57/94 (60%)
 Frame = -2

Query: 476 GDIWTWKVGIRISKKGVYSDTFIYPPLRLQKKSGKKLRFRSKKSIITYLQVEFPEADIAA 297
           GD W W+VG R++  G + D FIYPP  +  K  +K  F SK ++ ++++ +FP AD+ A
Sbjct: 45  GDNWEWRVGRRVNSSGYFQDRFIYPPKSIHGK--RKKMFASKPALESFIRTKFPSADVDA 102

Query: 296 FFNSFTWKVPANVSCSARKAQVTPHPRKVHSRPK 195
           FF SFTWK+PA V       +V P P  + + P+
Sbjct: 103 FFASFTWKIPAKVQ---SPKEVKPAPLPLENPPE 133


>ref|XP_002311630.1| predicted protein [Populus trichocarpa] gi|222851450|gb|EEE88997.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/86 (47%), Positives = 52/86 (60%)
 Frame = -2

Query: 476 GDIWTWKVGIRISKKGVYSDTFIYPPLRLQKKSGKKLRFRSKKSIITYLQVEFPEADIAA 297
           GD W W+VG R++  G + D FIY P  LQ K  KK  F S+ ++  Y++  FP ADI A
Sbjct: 20  GDNWEWRVGKRVNSSGHFQDRFIYLPKSLQGK--KKQMFASRPALENYIRSAFPGADIDA 77

Query: 296 FFNSFTWKVPANVSCSARKAQVTPHP 219
           FF SFTWK+PA V  S  K +  P P
Sbjct: 78  FFASFTWKIPAKVQ-SPTKVEAAPLP 102


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