BLASTX nr result

ID: Bupleurum21_contig00016688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016688
         (1528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinu...   160   6e-37
ref|XP_003617281.1| Lateral signaling target protein-like protei...   159   1e-36
ref|XP_002298476.1| predicted protein [Populus trichocarpa] gi|2...   158   3e-36
ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248...   157   9e-36
gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japo...   156   2e-35

>ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223533605|gb|EEF35343.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 1100

 Score =  160 bits (406), Expect = 6e-37
 Identities = 99/213 (46%), Positives = 109/213 (51%), Gaps = 73/213 (34%)
 Frame = -3

Query: 1472 LSLGVAAEYKKAVVKLGGVSH----GACDYIVVGHFVHGNEVSHWVPKRANGPLEG---- 1317
            + L    EY    V L G  +    G  ++ ++GH   GNEVSHWVPKR NGPLEG    
Sbjct: 358  IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH---GNEVSHWVPKRVNGPLEGIHVS 414

Query: 1316 ------------------------------HGDRRIILKPREVESLKGLCTVLAACGVWH 1227
                                          HGDR+ +  PREVESLKGL TV AACGVWH
Sbjct: 415  SISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 474

Query: 1226 TFAVVEVMVGNSSSSNCLSGKMITWGDG-------------------------------- 1143
            T AVVEVMVGNSSSSNC SGK+ TWGDG                                
Sbjct: 475  TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVAC 534

Query: 1142 ---LPIAFTTSGHVYTMGSPVYGQLGNLQADGK 1053
               L +A TTSGHVYTMGSPVYGQLGN QADGK
Sbjct: 535  GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK 567


>ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
            gi|355518616|gb|AET00240.1| Lateral signaling target
            protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  159 bits (403), Expect = 1e-36
 Identities = 97/212 (45%), Positives = 109/212 (51%), Gaps = 72/212 (33%)
 Frame = -3

Query: 1472 LSLGVAAEYKKAVVKLGGV----SHGACDYIVVGHFVHGNEVSHWVPKRANGPLEG---- 1317
            + L    EY    V L G      +GA +Y ++GH   GN+VSHWVPKR NGPLEG    
Sbjct: 386  IELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGH---GNQVSHWVPKRVNGPLEGIHVS 442

Query: 1316 ------------------------------HGDRRIILKPREVESLKGLCTVLAACGVWH 1227
                                          HGDR+ +  PREVESLKGL T+ A+CGVWH
Sbjct: 443  YISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWH 502

Query: 1226 TFAVVEVMVGNSSSSNCLSGKMITWGDG-------------------------------- 1143
            T AVVEVMVGNSSSSNC SGK+ TWGDG                                
Sbjct: 503  TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNFCQVACG 562

Query: 1142 --LPIAFTTSGHVYTMGSPVYGQLGNLQADGK 1053
              L +A TTSGHVY MGSPVYGQLGN QADGK
Sbjct: 563  HSLTVALTTSGHVYAMGSPVYGQLGNPQADGK 594


>ref|XP_002298476.1| predicted protein [Populus trichocarpa] gi|222845734|gb|EEE83281.1|
            predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  158 bits (400), Expect = 3e-36
 Identities = 99/206 (48%), Positives = 107/206 (51%), Gaps = 73/206 (35%)
 Frame = -3

Query: 1451 EYKKAVVKLGGVSH----GACDYIVVGHFVHGNEVSHWVPKRANGPLEG----------- 1317
            EY    V L G  +    G  ++ ++GH   GNEVSHWVPKR NGPLEG           
Sbjct: 376  EYHTCAVTLSGDLYTWGDGTYNFGLLGH---GNEVSHWVPKRVNGPLEGIHVSSISCGPW 432

Query: 1316 -----------------------HGDRRIILKPREVESLKGLCTVLAACGVWHTFAVVEV 1206
                                   HGDR+ I  PREVESLKGL TV AACGVWHT AVVEV
Sbjct: 433  HTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEV 492

Query: 1205 MVGNSSSSNCLSGKMITWGDG-----------------------------------LPIA 1131
            MVGNSSSSNC SGK+ TWGDG                                   L IA
Sbjct: 493  MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIA 552

Query: 1130 FTTSGHVYTMGSPVYGQLGNLQADGK 1053
             TTSGHVYTMGSPVYGQLGN Q+DGK
Sbjct: 553  RTTSGHVYTMGSPVYGQLGNPQSDGK 578


>ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
            vinifera]
          Length = 1107

 Score =  157 bits (396), Expect = 9e-36
 Identities = 95/213 (44%), Positives = 108/213 (50%), Gaps = 73/213 (34%)
 Frame = -3

Query: 1472 LSLGVAAEYKKAVVKLGGVSH----GACDYIVVGHFVHGNEVSHWVPKRANGPLEG---- 1317
            + L    EY    V L G  +    G  ++ ++GH   GNEVSHWVPKR NGPLEG    
Sbjct: 366  IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH---GNEVSHWVPKRVNGPLEGIHVS 422

Query: 1316 ------------------------------HGDRRIILKPREVESLKGLCTVLAACGVWH 1227
                                          HGD + + KPREVESLKG  TV++ACGVWH
Sbjct: 423  SISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWH 482

Query: 1226 TFAVVEVMVGNSSSSNCLSGKMITWGDG-------------------------------- 1143
            T AVVE+MVGN SSSNC SGK+ TWGDG                                
Sbjct: 483  TAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVAC 542

Query: 1142 ---LPIAFTTSGHVYTMGSPVYGQLGNLQADGK 1053
               L +A TTSGHVYTMGSPVYGQLGN QADGK
Sbjct: 543  GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK 575


>gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  156 bits (394), Expect = 2e-35
 Identities = 97/212 (45%), Positives = 107/212 (50%), Gaps = 73/212 (34%)
 Frame = -3

Query: 1472 LSLGVAAEYKKAVVKLGGV----SHGACDYIVVGHFVHGNEVSHWVPKRANGPLEG---- 1317
            + L    EY    V L G      +G  +  ++GH   GNEVSHWVPKR NGPLEG    
Sbjct: 410  IELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGH---GNEVSHWVPKRVNGPLEGIHVS 466

Query: 1316 ------------------------------HGDRRIILKPREVESLKGLCTVLAACGVWH 1227
                                          HGDR+ +  PREVESLKGL TV AACGVWH
Sbjct: 467  AISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWH 526

Query: 1226 TFAVVEVMVGNSSSSNCLSGKMITWGDG-------------------------------- 1143
            T AVVEVMVGNSSSSNC SGK+ TWGDG                                
Sbjct: 527  TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIAC 586

Query: 1142 ---LPIAFTTSGHVYTMGSPVYGQLGNLQADG 1056
               + +A TTSGHVYTMGSPVYGQLGN QADG
Sbjct: 587  GHCMTVALTTSGHVYTMGSPVYGQLGNPQADG 618


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