BLASTX nr result

ID: Bupleurum21_contig00016649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016649
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143085.1| PREDICTED: cullin-1-like [Cucumis sativus] g...   141   3e-48
ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223...   142   9e-48
ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifer...   140   2e-47
gb|AFJ21665.1| cullin 1-like protein B [Prunus avium]                 142   3e-47
ref|XP_003529578.1| PREDICTED: cullin-1-like isoform 1 [Glycine ...   139   4e-47

>ref|XP_004143085.1| PREDICTED: cullin-1-like [Cucumis sativus]
           gi|449517495|ref|XP_004165781.1| PREDICTED:
           cullin-1-like [Cucumis sativus]
          Length = 744

 Score =  141 bits (355), Expect(2) = 3e-48
 Identities = 67/79 (84%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +2

Query: 221 AEDAASNRMAERS-VVGLHEQVFVRKIIELHDKYLSYVNDCFMNHTLFHKALKEAFEIFC 397
           AEDAASN+ AE+  +VGL EQVFVRK+IELHDKYL+YVNDCF NHTLFHKALKEAFE+FC
Sbjct: 322 AEDAASNKKAEKKDIVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEVFC 381

Query: 398 NKGVAGSSNAELLATFCDN 454
           NKGVAGSS+AELLATFCDN
Sbjct: 382 NKGVAGSSSAELLATFCDN 400



 Score = 75.9 bits (185), Expect(2) = 3e-48
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   LRDDKVEDLSRMYRLFSKIPKGLDPVSNTFKQHVTNEGT 119
           LRDDKVEDLSRM+RLFSKIPKGLDPVSN FKQHVT EGT
Sbjct: 278 LRDDKVEDLSRMFRLFSKIPKGLDPVSNIFKQHVTAEGT 316


>ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223543987|gb|EEF45513.1|
           Cullin-1, putative [Ricinus communis]
          Length = 744

 Score =  142 bits (359), Expect(2) = 9e-48
 Identities = 69/79 (87%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +2

Query: 221 AEDAASNRMAE-RSVVGLHEQVFVRKIIELHDKYLSYVNDCFMNHTLFHKALKEAFEIFC 397
           AEDAASN+ AE R VVGL EQVFVRK+IELHDKYL+YVNDCF NHTLFHKALKEAFE+FC
Sbjct: 322 AEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEVFC 381

Query: 398 NKGVAGSSNAELLATFCDN 454
           NKGVAGSS+AELLATFCDN
Sbjct: 382 NKGVAGSSSAELLATFCDN 400



 Score = 72.8 bits (177), Expect(2) = 9e-48
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   LRDDKVEDLSRMYRLFSKIPKGLDPVSNTFKQHVTNEGT 119
           LRDDKVEDLSRM+RLFSKIP+GLDPVS+ FKQHVT EGT
Sbjct: 278 LRDDKVEDLSRMFRLFSKIPRGLDPVSSIFKQHVTAEGT 316


>ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifera]
           gi|297736859|emb|CBI26060.3| unnamed protein product
           [Vitis vinifera]
          Length = 744

 Score =  140 bits (354), Expect(2) = 2e-47
 Identities = 68/79 (86%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +2

Query: 221 AEDAASNRMAE-RSVVGLHEQVFVRKIIELHDKYLSYVNDCFMNHTLFHKALKEAFEIFC 397
           AEDAASN+ A+ R VVGL EQVFVRK+IELHDKYL+YVNDCF NHTLFHKALKEAFE+FC
Sbjct: 322 AEDAASNKKADKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFNNHTLFHKALKEAFEVFC 381

Query: 398 NKGVAGSSNAELLATFCDN 454
           NKGVAGSS+AELLATFCDN
Sbjct: 382 NKGVAGSSSAELLATFCDN 400



 Score = 73.6 bits (179), Expect(2) = 2e-47
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   LRDDKVEDLSRMYRLFSKIPKGLDPVSNTFKQHVTNEGT 119
           LRDDKV+DLSRMYRLFSKIP+GL+PVSN FKQHVT EGT
Sbjct: 278 LRDDKVDDLSRMYRLFSKIPRGLEPVSNIFKQHVTAEGT 316


>gb|AFJ21665.1| cullin 1-like protein B [Prunus avium]
          Length = 744

 Score =  142 bits (357), Expect(2) = 3e-47
 Identities = 69/79 (87%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +2

Query: 221 AEDAASNRMAERS-VVGLHEQVFVRKIIELHDKYLSYVNDCFMNHTLFHKALKEAFEIFC 397
           AEDAASN+ AE+  VVGL EQVFVRK+IELHDKYL+YVNDCF NHTLFHKALKEAFEIFC
Sbjct: 322 AEDAASNKKAEKKDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEIFC 381

Query: 398 NKGVAGSSNAELLATFCDN 454
           NKGVAGSS+AELLATFCDN
Sbjct: 382 NKGVAGSSSAELLATFCDN 400



 Score = 71.6 bits (174), Expect(2) = 3e-47
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   LRDDKVEDLSRMYRLFSKIPKGLDPVSNTFKQHVTNEGT 119
           LRDDKV+DLSRM+RLFSKIP+GLDPVS+ FKQHVT EGT
Sbjct: 278 LRDDKVDDLSRMFRLFSKIPRGLDPVSSIFKQHVTAEGT 316


>ref|XP_003529578.1| PREDICTED: cullin-1-like isoform 1 [Glycine max]
          Length = 744

 Score =  139 bits (351), Expect(2) = 4e-47
 Identities = 66/79 (83%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +2

Query: 221 AEDAASNRMAERS-VVGLHEQVFVRKIIELHDKYLSYVNDCFMNHTLFHKALKEAFEIFC 397
           AEDAASN+ AE+  +VGL EQVFVRK+IELHDKYL+YVNDCF NHTLFHKALKEAFE+FC
Sbjct: 322 AEDAASNKKAEKKDIVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEVFC 381

Query: 398 NKGVAGSSNAELLATFCDN 454
           NKGVAGSS+AELLA+FCDN
Sbjct: 382 NKGVAGSSSAELLASFCDN 400



 Score = 73.6 bits (179), Expect(2) = 4e-47
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   LRDDKVEDLSRMYRLFSKIPKGLDPVSNTFKQHVTNEG 116
           LRDDKVEDLSRM+RLFSKIP+GLDPVSN FKQHVT EG
Sbjct: 278 LRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTTEG 315


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