BLASTX nr result

ID: Bupleurum21_contig00016645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016645
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285121.1| PREDICTED: zinc finger protein 4-like [Vitis...   112   3e-23
gb|ADL36634.1| C2H2L domain class transcription factor [Malus x ...   107   1e-21
ref|NP_001241172.1| uncharacterized protein LOC100791723 [Glycin...   103   2e-20
ref|XP_002527542.1| zinc finger protein, putative [Ricinus commu...   102   3e-20
ref|XP_002315844.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20

>ref|XP_002285121.1| PREDICTED: zinc finger protein 4-like [Vitis vinifera]
          Length = 246

 Score =  112 bits (280), Expect = 3e-23
 Identities = 63/121 (52%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
 Frame = -1

Query: 361 MPPPNKXXXXXXXXXXXSQVASNVSISNKSPQ-SNHSTTTSSCLTNHMQLQADPGFTTLN 185
           M PPN            SQVASNVSI   S   S  STTTSSCLTN ++LQ D G  +L+
Sbjct: 1   MEPPNYNVESEDESEVSSQVASNVSIQETSSDPSKDSTTTSSCLTNLIKLQPDQGSVSLD 60

Query: 184 LTLGFNSSNTEVTKDADMHEHNTEDSAPYVPSGTMPRVFSCNYCRRKFYSSQALGGHQNA 5
           LTL FN ++T++    +    ++ D+    P  T P+VFSCNYCRRKF+SSQALGGHQNA
Sbjct: 61  LTLCFNPNDTKLKGMGE----SSSDAVAQAPVATAPKVFSCNYCRRKFFSSQALGGHQNA 116

Query: 4   H 2
           H
Sbjct: 117 H 117


>gb|ADL36634.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 255

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
 Frame = -1

Query: 298 SNVSISNKSPQ-SNHSTTTSSCLTNHMQLQADPGFTTLNLTLGFNSSNTEVTKDADMHEH 122
           S++ +  +SP  S  STTTSSCLTN    Q DP   +L+LTL F+S +TE+       E 
Sbjct: 23  SSIPLQEESPDPSKDSTTTSSCLTNQKHQQQDPRPVSLHLTLQFSSGDTELKGTG---ET 79

Query: 121 NTEDSAPYVPSGTMPRVFSCNYCRRKFYSSQALGGHQNAH 2
           ++E +AP    GT+PRVFSCNYC+RKFYSSQALGGHQNAH
Sbjct: 80  SSEVAAPPTSEGTIPRVFSCNYCKRKFYSSQALGGHQNAH 119


>ref|NP_001241172.1| uncharacterized protein LOC100791723 [Glycine max]
           gi|255645596|gb|ACU23292.1| unknown [Glycine max]
          Length = 251

 Score =  103 bits (256), Expect = 2e-20
 Identities = 64/121 (52%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
 Frame = -1

Query: 361 MPPPNKXXXXXXXXXXXSQVASNVSISNKSPQ-SNHSTTTSSCLTNHMQLQADPGFTTLN 185
           M  PN            SQVASNVS+   S   +  STTTSSCLT     + DPGF TL+
Sbjct: 1   MMTPNLNLEIENHSEGSSQVASNVSLHEASHDLTKGSTTTSSCLTKD---ETDPGFITLD 57

Query: 184 LTLGFNSSNTEVTKDADMHEHNTEDSAPYVPSGTMPRVFSCNYCRRKFYSSQALGGHQNA 5
           LTL FN+S     K +          AP   S T PRVFSCNYCRRKFYSSQALGGHQNA
Sbjct: 58  LTLNFNNSGDGELKVSSDASSEVGAEAPASASAT-PRVFSCNYCRRKFYSSQALGGHQNA 116

Query: 4   H 2
           H
Sbjct: 117 H 117


>ref|XP_002527542.1| zinc finger protein, putative [Ricinus communis]
           gi|223533092|gb|EEF34851.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 249

 Score =  102 bits (254), Expect = 3e-20
 Identities = 60/121 (49%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
 Frame = -1

Query: 361 MPPPNKXXXXXXXXXXXSQVASNVSISNKSPQ-SNHSTTTSSCLTNHMQLQADPGFTTLN 185
           M PPN             QVASNVS+   S   S    T  S LT+  +LQ  P   +LN
Sbjct: 1   MTPPNSILESENESEISGQVASNVSLQEPSSDPSKDGNTPCSSLTDLNRLQQSPMPVSLN 60

Query: 184 LTLGFNSSNTEVTKDADMHEHNTEDSAPYVPSGTMPRVFSCNYCRRKFYSSQALGGHQNA 5
           L+L FN+S+ E+       E ++E +AP   + TMPRVFSCNYCRRKFYSSQALGGHQNA
Sbjct: 61  LSLTFNASDIELKGTG---ETSSEAAAPSPAAPTMPRVFSCNYCRRKFYSSQALGGHQNA 117

Query: 4   H 2
           H
Sbjct: 118 H 118


>ref|XP_002315844.1| predicted protein [Populus trichocarpa] gi|222864884|gb|EEF02015.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  101 bits (251), Expect = 7e-20
 Identities = 58/121 (47%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
 Frame = -1

Query: 361 MPPPNKXXXXXXXXXXXSQVASNVSISNKSPQ-SNHSTTTSSCLTNHMQLQADPGFTTLN 185
           M PP             SQVASN+ +   SP  S  STT SS LT+ +++Q +P   +L+
Sbjct: 1   MIPPKSNLDFENDSEVSSQVASNLPMHAPSPDPSKESTTPSSSLTDLIKIQENPVPVSLD 60

Query: 184 LTLGFNSSNTEVTKDADMHEHNTEDSAPYVPSGTMPRVFSCNYCRRKFYSSQALGGHQNA 5
           L+L FNSS  E+    +     + + A + P+ T+PRVFSCNYCRRKFYSSQALGGHQNA
Sbjct: 61  LSLHFNSSEIELKGTGE----TSSEVAAHAPNTTIPRVFSCNYCRRKFYSSQALGGHQNA 116

Query: 4   H 2
           H
Sbjct: 117 H 117


Top