BLASTX nr result

ID: Bupleurum21_contig00016629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016629
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855...   236   3e-60
emb|CBI24866.3| unnamed protein product [Vitis vinifera]              234   1e-59
ref|XP_002299951.1| predicted protein [Populus trichocarpa] gi|2...   228   6e-58
ref|XP_002313291.1| predicted protein [Populus trichocarpa] gi|2...   212   5e-53
ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago ...   210   2e-52

>ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
          Length = 700

 Score =  236 bits (602), Expect = 3e-60
 Identities = 124/212 (58%), Positives = 151/212 (71%), Gaps = 3/212 (1%)
 Frame = -2

Query: 627 DQSDDLTFRVNFAGDGVAKLRDRVKDKLKEFMGDYTDDTLVEYVIVLLKNGRRKVEAKNE 448
           D+ DD TFRVNF+GDG A+LR+RVK+KLKEFMGDYTDDTLVEYVIVLL+NGRRK EA+NE
Sbjct: 5   DRMDDRTFRVNFSGDGAARLRERVKEKLKEFMGDYTDDTLVEYVIVLLRNGRRKEEARNE 64

Query: 447 LNVFLGDDSDSFVSWLWDHLGKHIDLYVQPKNASLTEVSKIK--LPEQAQMLDTQHMDAG 274
           LNVFLGDDS SFVSWLWDHL  H+ LYV P+ +   E+++ K  L E  +  D+ H+D+ 
Sbjct: 65  LNVFLGDDSHSFVSWLWDHLDSHLQLYVLPQESYPDEIAETKHTLGEHTERNDSLHLDS- 123

Query: 273 HEREKINKL-SRGRHGREWKGLLNDSVENLPLRSVVTADIHVDEDAHMKVDIPKRAPSPR 97
            E E+ N L SR RH REWKGL  D  E  PLRS     +  +E  H KV   KR+ SP+
Sbjct: 124 -ESERGNSLRSRSRHNREWKGLARDGAEPPPLRSSEDDHVQTEEKTHRKVGHAKRSLSPK 182

Query: 96  PLVQRKRRRPDERLHIKKDEVSKTLINAPRRL 1
              Q+KR RPD+    K++ VS+  INAPRRL
Sbjct: 183 HPNQKKRNRPDDLKQAKREVVSQATINAPRRL 214


>emb|CBI24866.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  234 bits (596), Expect = 1e-59
 Identities = 123/209 (58%), Positives = 149/209 (71%), Gaps = 3/209 (1%)
 Frame = -2

Query: 618 DDLTFRVNFAGDGVAKLRDRVKDKLKEFMGDYTDDTLVEYVIVLLKNGRRKVEAKNELNV 439
           DD TFRVNF+GDG A+LR+RVK+KLKEFMGDYTDDTLVEYVIVLL+NGRRK EA+NELNV
Sbjct: 2   DDRTFRVNFSGDGAARLRERVKEKLKEFMGDYTDDTLVEYVIVLLRNGRRKEEARNELNV 61

Query: 438 FLGDDSDSFVSWLWDHLGKHIDLYVQPKNASLTEVSKIK--LPEQAQMLDTQHMDAGHER 265
           FLGDDS SFVSWLWDHL  H+ LYV P+ +   E+++ K  L E  +  D+ H+D+  E 
Sbjct: 62  FLGDDSHSFVSWLWDHLDSHLQLYVLPQESYPDEIAETKHTLGEHTERNDSLHLDS--ES 119

Query: 264 EKINKL-SRGRHGREWKGLLNDSVENLPLRSVVTADIHVDEDAHMKVDIPKRAPSPRPLV 88
           E+ N L SR RH REWKGL  D  E  PLRS     +  +E  H KV   KR+ SP+   
Sbjct: 120 ERGNSLRSRSRHNREWKGLARDGAEPPPLRSSEDDHVQTEEKTHRKVGHAKRSLSPKHPN 179

Query: 87  QRKRRRPDERLHIKKDEVSKTLINAPRRL 1
           Q+KR RPD+    K++ VS+  INAPRRL
Sbjct: 180 QKKRNRPDDLKQAKREVVSQATINAPRRL 208


>ref|XP_002299951.1| predicted protein [Populus trichocarpa] gi|222847209|gb|EEE84756.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score =  228 bits (582), Expect = 6e-58
 Identities = 119/210 (56%), Positives = 147/210 (70%), Gaps = 3/210 (1%)
 Frame = -2

Query: 621 SDDLTFRVNFAGDGVAKLRDRVKDKLKEFMGDYTDDTLVEYVIVLLKNGRRKVEAKNELN 442
           S D  FRVNF+ DG A LRDRV +KLKEFMGDYTDD LVEYVIVLL+NGR K EA+NELN
Sbjct: 3   SVDKKFRVNFSEDGAALLRDRVSEKLKEFMGDYTDDVLVEYVIVLLRNGRDKEEARNELN 62

Query: 441 VFLGDDSDSFVSWLWDHLGKHIDLYVQPKNASLTEVSKIK--LPEQAQMLDTQHMDAGHE 268
           VFLGDDSDSFVSWLWDHL  ++D+YVQP      EV++    L EQ    ++  +D+ HE
Sbjct: 63  VFLGDDSDSFVSWLWDHLATNLDMYVQPPETHADEVARTNPTLIEQTGGNESHQLDSEHE 122

Query: 267 REKINKLSRGRHGREWKGLLNDSVENLPLRSVVTADIHVDEDAHMKVDIPKRAPSPRPLV 88
             K +  SRGRH REWKG+  D  +  PLRS V  +IH++E  H K    +R+PSP+P  
Sbjct: 123 NVKPDNSSRGRHKREWKGVARDVNQPPPLRSSVVDNIHLEEKTHGKASRARRSPSPQPPQ 182

Query: 87  QRKRRRPDERLHIK-KDEVSKTLINAPRRL 1
           ++KR R DE+ H+K +D VS+    APRRL
Sbjct: 183 EQKRSRHDEQQHVKQRDAVSQATSGAPRRL 212


>ref|XP_002313291.1| predicted protein [Populus trichocarpa] gi|222849699|gb|EEE87246.1|
           predicted protein [Populus trichocarpa]
          Length = 762

 Score =  212 bits (539), Expect = 5e-53
 Identities = 118/250 (47%), Positives = 147/250 (58%), Gaps = 43/250 (17%)
 Frame = -2

Query: 621 SDDLTFRVNFAGDGVAKLRDRVKDKLKEFMGDYTDDTLV--------------------- 505
           S D   RVNF+GDG A LRDRV +KLKEFMGDYTDD LV                     
Sbjct: 3   SVDKKIRVNFSGDGAALLRDRVSEKLKEFMGDYTDDVLVFGIEFSKVEVSLCCYELVQER 62

Query: 504 --------------------EYVIVLLKNGRRKVEAKNELNVFLGDDSDSFVSWLWDHLG 385
                               EYVIVLL+NGR K EA+NELNVFLGDDS+SFVSWLWDHL 
Sbjct: 63  VTSRKLVMCRLWELLRFCSKEYVIVLLRNGRDKEEARNELNVFLGDDSESFVSWLWDHLA 122

Query: 384 KHIDLYVQPKNASLTEVSKIK--LPEQAQMLDTQHMDAGHEREKINKLSRGRHGREWKGL 211
            ++DLYVQP+     EV++    L EQ    ++ HMD+  ++ K +   RGRH REWKG+
Sbjct: 123 TNLDLYVQPQETGTDEVARTNPTLVEQTGGNESHHMDSEPQKVKPDNSYRGRHKREWKGV 182

Query: 210 LNDSVENLPLRSVVTADIHVDEDAHMKVDIPKRAPSPRPLVQRKRRRPDERLHIKKDEVS 31
           + D     PLRS V  +IH +E  H +V   +R+ SP+P  Q+KR + DER H+K+D VS
Sbjct: 183 VRDVNHRPPLRSSVVVNIHQEEKTHCEVSHARRSTSPQPPQQKKRSQHDERQHVKRDTVS 242

Query: 30  KTLINAPRRL 1
           +    APRRL
Sbjct: 243 QATSRAPRRL 252


>ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
           gi|355488171|gb|AES69374.1| Polyadenylate-binding
           protein 2-A [Medicago truncatula]
          Length = 685

 Score =  210 bits (534), Expect = 2e-52
 Identities = 110/213 (51%), Positives = 144/213 (67%), Gaps = 2/213 (0%)
 Frame = -2

Query: 633 MMDQSDDLTFRVNFAGDGVAKLRDRVKDKLKEFMGDYTDDTLVEYVIVLLKNGRRKVEAK 454
           ++++ D+   ++NF  DG AKLR+ V +KLKEFMG+YTDDTLVEYVIV+L+NG+ K +AK
Sbjct: 4   VVERDDNRIIKMNFTMDGAAKLRESVTEKLKEFMGEYTDDTLVEYVIVILRNGKSKEQAK 63

Query: 453 NELNVFLGDDSDSFVSWLWDHLGKHIDLYVQPKNASLTEVSKIKLPEQAQMLD--TQHMD 280
           NELNVFLGDDSDSFVSWLWDHL  ++ LYV+P+     E  K KL  + +  D   QH  
Sbjct: 64  NELNVFLGDDSDSFVSWLWDHLHLNLALYVKPEKLQ-DEAPKRKLISEIKAGDDGLQHSK 122

Query: 279 AGHEREKINKLSRGRHGREWKGLLNDSVENLPLRSVVTADIHVDEDAHMKVDIPKRAPSP 100
           +  ER   NK SR RH ++WKGL+    E   +RS    + HV+E     V+  +R+PSP
Sbjct: 123 SELERGNSNKFSRSRHNKDWKGLVKGEAEAPTIRSFEVDNAHVEEKVRSNVNRSRRSPSP 182

Query: 99  RPLVQRKRRRPDERLHIKKDEVSKTLINAPRRL 1
           +P VQRKR R DE+   K+D VS+  I APRRL
Sbjct: 183 KPAVQRKRGRADEQQRPKRDVVSQVNIAAPRRL 215


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