BLASTX nr result

ID: Bupleurum21_contig00016619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016619
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI80346.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [...   374   e-115
gb|AFM77981.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [...   366   e-112
gb|AAV54051.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [...   338   5e-98
gb|AFN89600.1| 3-hydro-3-methylglutary CoA reductase [Gentiana m...   325   4e-96
gb|ACD37361.1| 3-hydroxy-3-methylglutaryl-coenzyme A reductase [...   332   2e-95

>gb|ADI80346.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [Panax ginseng]
          Length = 573

 Score =  374 bits (961), Expect(2) = e-115
 Identities = 191/235 (81%), Positives = 210/235 (89%), Gaps = 6/235 (2%)
 Frame = -2

Query: 689 ISELAAIVSLIASFIYLLGFFGIDFVQSFISRPYADI---IDGDILDSESRPRSSFITSP 519
           +SELAAIVSLIASFIYLLGFFGIDFVQSF+SR   D+   ++ DIL+++ RP S  +  P
Sbjct: 88  LSELAAIVSLIASFIYLLGFFGIDFVQSFVSRADVDVDIDVEPDILETDRRPCSKLMDQP 147

Query: 518 APE---MSSEEDEEIVKSVVSGKTPSYSLESKLGNCHRAASIRREAVQRMTDRSLIGLPL 348
            P    MSSEEDEEIVKSVV+GKTPSYSLESKLG+C+RAASIRREAVQR T RSL+GLPL
Sbjct: 148 LPPPVVMSSEEDEEIVKSVVTGKTPSYSLESKLGDCYRAASIRREAVQRTTGRSLLGLPL 207

Query: 347 DGFDYESILGQCCEMPIGFVQIPVGIAGPLLLNGCEYSVPMATTEGCLVASTNRGCKAIY 168
           DGFDYESILGQCCEMPIG+VQIPVGIAGPLLLNGCEY VPMATTEGCLVASTNRGCKAIY
Sbjct: 208 DGFDYESILGQCCEMPIGYVQIPVGIAGPLLLNGCEYVVPMATTEGCLVASTNRGCKAIY 267

Query: 167 ACGGATGIILKDSMTRAPVVRFSSAKRASDLKFFLEDPLNFETLALMFNKSSRFA 3
           ACGGATGI+LKD MTRAPVVRFS+AKRASDLKFFLEDP NF+TLA++  KSSRFA
Sbjct: 268 ACGGATGILLKDGMTRAPVVRFSTAKRASDLKFFLEDPFNFDTLAVVSKKSSRFA 322



 Score = 68.2 bits (165), Expect(2) = e-115
 Identities = 36/56 (64%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
 Frame = -1

Query: 951 MEARRKLPP--RHPRSLPETSDHHQKERFPATIDRSSSP-PKASDALPLPLYLTNG 793
           ME  R+LPP  R P  + E+S HH+K  F A +DRS SP PKASDALPLPLYLTNG
Sbjct: 1   METSRRLPPIPRRPLPITESSHHHRKTPFLADVDRSPSPTPKASDALPLPLYLTNG 56


>gb|AFM77981.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [Eleutherococcus
           senticosus]
          Length = 570

 Score =  366 bits (940), Expect(2) = e-112
 Identities = 187/232 (80%), Positives = 207/232 (89%), Gaps = 3/232 (1%)
 Frame = -2

Query: 689 ISELAAIVSLIASFIYLLGFFGIDFVQSFISRPYADI-IDGDILDSESRPRSSFITSPAP 513
           +++LAAIVSLIASFIYLLGFFGI+FVQSF+SR   D   D  IL+++ RP S  +  P P
Sbjct: 88  LADLAAIVSLIASFIYLLGFFGINFVQSFVSRADVDFDADPVILEADRRPCSKLMDQPPP 147

Query: 512 E--MSSEEDEEIVKSVVSGKTPSYSLESKLGNCHRAASIRREAVQRMTDRSLIGLPLDGF 339
              + S EDEEIVKSV+SGKTPSYSLESKLG+C+RAASIRREAVQR T+RSL+GLPLDG 
Sbjct: 148 PPLLMSLEDEEIVKSVISGKTPSYSLESKLGDCYRAASIRREAVQRTTERSLVGLPLDGV 207

Query: 338 DYESILGQCCEMPIGFVQIPVGIAGPLLLNGCEYSVPMATTEGCLVASTNRGCKAIYACG 159
           DY+SILGQCCEMPIGFVQIPVGIAGPLLLNGCEY VPMATTEGCLVASTNRGCKAIYACG
Sbjct: 208 DYDSILGQCCEMPIGFVQIPVGIAGPLLLNGCEYLVPMATTEGCLVASTNRGCKAIYACG 267

Query: 158 GATGIILKDSMTRAPVVRFSSAKRASDLKFFLEDPLNFETLALMFNKSSRFA 3
           GATGI+LKD MTRAPVVRFS+AKRASDLKFFLEDPLNF+TLA+ FNKSSRFA
Sbjct: 268 GATGILLKDGMTRAPVVRFSTAKRASDLKFFLEDPLNFDTLAVAFNKSSRFA 319



 Score = 68.2 bits (165), Expect(2) = e-112
 Identities = 34/56 (60%), Positives = 42/56 (75%), Gaps = 3/56 (5%)
 Frame = -1

Query: 951 MEARRKLPPRHPRSLP--ETSDHHQKERFPATIDRSSSP-PKASDALPLPLYLTNG 793
           M+ RR+LPP+    +P  E+S HH+K  FPA +DRS SP PKASDALP+PLYL NG
Sbjct: 1   MDVRRRLPPKPSLPIPTTESSHHHRKTPFPADVDRSPSPTPKASDALPVPLYLANG 56


>gb|AAV54051.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [Eucommia ulmoides]
          Length = 590

 Score =  338 bits (868), Expect(2) = 5e-98
 Identities = 182/254 (71%), Positives = 205/254 (80%), Gaps = 25/254 (9%)
 Frame = -2

Query: 689 ISELAAIVSLIASFIYLLGFFGIDFVQSFISRPYADIIDGD-----ILDSESR------- 546
           +SELAAIVSLIASFIYLLGFFGIDFVQSFI+R   D  D D     IL+ + R       
Sbjct: 86  LSELAAIVSLIASFIYLLGFFGIDFVQSFIARASHDPWDVDDDERFILEEDRRRGPCTAA 145

Query: 545 ---------PRSSFITS----PAPEMSSEEDEEIVKSVVSGKTPSYSLESKLGNCHRAAS 405
                    P  S +      PAP + S EDE++VKSV+SG  PSYSLESKLG+C+RAAS
Sbjct: 146 LDCLVGPVAPSISDVRKLMDPPAP-LPSVEDEQMVKSVISGTVPSYSLESKLGDCYRAAS 204

Query: 404 IRREAVQRMTDRSLIGLPLDGFDYESILGQCCEMPIGFVQIPVGIAGPLLLNGCEYSVPM 225
           IRREA+QR+T +SL GLPL+GFDYE+ILGQCCEMPIGF+QIPVGIAGPLLLNGCEYSVPM
Sbjct: 205 IRREAIQRITGKSLSGLPLEGFDYEAILGQCCEMPIGFLQIPVGIAGPLLLNGCEYSVPM 264

Query: 224 ATTEGCLVASTNRGCKAIYACGGATGIILKDSMTRAPVVRFSSAKRASDLKFFLEDPLNF 45
           ATTEGCLVASTNRGCKAIYA GGAT I+L+D MTRAPVVRF SAKRAS+LKFFLEDPLNF
Sbjct: 265 ATTEGCLVASTNRGCKAIYASGGATSILLRDGMTRAPVVRFPSAKRASELKFFLEDPLNF 324

Query: 44  ETLALMFNKSSRFA 3
           ETL+++FNKSSRFA
Sbjct: 325 ETLSMVFNKSSRFA 338



 Score = 47.0 bits (110), Expect(2) = 5e-98
 Identities = 28/54 (51%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = -1

Query: 951 MEARRKLPPRHPRSLPETSDHHQKERFPATIDRSSSP-PKASDALPLPLYLTNG 793
           M+ RR+ P     +      HHQ       ID S SP PKASDALPLPLYLTNG
Sbjct: 1   MDLRRRPPKPAATNGRNHHLHHQGNSSSPAIDCSPSPIPKASDALPLPLYLTNG 54


>gb|AFN89600.1| 3-hydro-3-methylglutary CoA reductase [Gentiana macrophylla]
          Length = 580

 Score =  325 bits (832), Expect(2) = 4e-96
 Identities = 173/244 (70%), Positives = 197/244 (80%), Gaps = 15/244 (6%)
 Frame = -2

Query: 689 ISELAAIVSLIASFIYLLGFFGIDFVQSFISRPYADIIDGDILDSESRPRSSF------I 528
           +SELAAI+SLIASFIYLLGFFGIDFVQS I+R   D    D+ + E              
Sbjct: 86  LSELAAILSLIASFIYLLGFFGIDFVQSVITRASPD--SWDVEEEEDHHHHHHHQQRFRC 143

Query: 527 TSPAPEMSS---------EEDEEIVKSVVSGKTPSYSLESKLGNCHRAASIRREAVQRMT 375
             PAP  +S         EEDE++VKSVVSG+ PS+SLESKL +C++AASIRREAVQR+T
Sbjct: 144 PPPAPISASPKLMDHHLTEEDEDLVKSVVSGEIPSHSLESKLEDCYKAASIRREAVQRLT 203

Query: 374 DRSLIGLPLDGFDYESILGQCCEMPIGFVQIPVGIAGPLLLNGCEYSVPMATTEGCLVAS 195
            RSL G+PLDGFDYESILGQCCEMP+G+VQIPVGIAGPLLLN  EYSVPMATTEGCLVAS
Sbjct: 204 GRSLSGMPLDGFDYESILGQCCEMPVGYVQIPVGIAGPLLLNDREYSVPMATTEGCLVAS 263

Query: 194 TNRGCKAIYACGGATGIILKDSMTRAPVVRFSSAKRASDLKFFLEDPLNFETLALMFNKS 15
           TNRGCKAIYA GGAT I+L+D MTRAPVVRF +AKRAS+LKFFLEDPLNF+TLA++FNKS
Sbjct: 264 TNRGCKAIYASGGATAILLRDGMTRAPVVRFPTAKRASELKFFLEDPLNFDTLAVVFNKS 323

Query: 14  SRFA 3
           SRFA
Sbjct: 324 SRFA 327



 Score = 54.7 bits (130), Expect(2) = 4e-96
 Identities = 34/56 (60%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
 Frame = -1

Query: 951 MEARRKLPPRHPRSLPETSDHHQKERFPATI--DRSSSP-PKASDALPLPLYLTNG 793
           ME RR+ PP+ P S      HHQ ++ P  I  DRS SP PKASDALPLPLYLTNG
Sbjct: 1   MEIRRR-PPK-PSSSSVQQLHHQSQQHPPVILDDRSPSPIPKASDALPLPLYLTNG 54


>gb|ACD37361.1| 3-hydroxy-3-methylglutaryl-coenzyme A reductase [Salvia
           miltiorrhiza]
          Length = 565

 Score =  332 bits (850), Expect(2) = 2e-95
 Identities = 168/237 (70%), Positives = 198/237 (83%), Gaps = 8/237 (3%)
 Frame = -2

Query: 689 ISELAAIVSLIASFIYLLGFFGIDFVQSFISRPYADIIDGDILDSESRPRSSFITSPAPE 510
           +SELA I+ LIASFIYLLGFFGIDFVQSFIS+P +D      +  E R     +  PAP 
Sbjct: 78  LSELAGILCLIASFIYLLGFFGIDFVQSFISKPESDEDHQRFILHEDRKIHCGLPPPAPV 137

Query: 509 MSS--------EEDEEIVKSVVSGKTPSYSLESKLGNCHRAASIRREAVQRMTDRSLIGL 354
           ++         ++DEE+V  VVSG+ PSYSLES+LG+C RAA IRREAVQR+T R + GL
Sbjct: 138 VAKAKAAVELPQDDEEVVDRVVSGEIPSYSLESRLGDCLRAAKIRREAVQRLTGRGVDGL 197

Query: 353 PLDGFDYESILGQCCEMPIGFVQIPVGIAGPLLLNGCEYSVPMATTEGCLVASTNRGCKA 174
           PL+GFDY+SILGQCCEMP+G+VQIPVGIAGPLLLNGCEYSVPMATTEGCLVASTNRGCKA
Sbjct: 198 PLEGFDYDSILGQCCEMPVGYVQIPVGIAGPLLLNGCEYSVPMATTEGCLVASTNRGCKA 257

Query: 173 IYACGGATGIILKDSMTRAPVVRFSSAKRASDLKFFLEDPLNFETLALMFNKSSRFA 3
           IYA GGAT ++L+D+MTRAPVVRFSSAKRA++LKFFLEDPLNF+TL+++FNKSSRFA
Sbjct: 258 IYASGGATCVLLRDAMTRAPVVRFSSAKRATELKFFLEDPLNFDTLSVVFNKSSRFA 314



 Score = 45.1 bits (105), Expect(2) = 2e-95
 Identities = 25/54 (46%), Positives = 29/54 (53%)
 Frame = -1

Query: 954 DMEARRKLPPRHPRSLPETSDHHQKERFPATIDRSSSPPKASDALPLPLYLTNG 793
           D+  R   PP  P +   TS         + +D   S PKASDALPLPLYLTNG
Sbjct: 2   DIRRRPARPPPPPSASTSTS---------SAVDHQPSSPKASDALPLPLYLTNG 46


Top