BLASTX nr result

ID: Bupleurum21_contig00016606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016606
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511871.1| ubiquitin-protein ligase, putative [Ricinus ...   134   3e-29
dbj|BAJ99610.1| predicted protein [Hordeum vulgare subsp. vulgare]    132   8e-29
emb|CBI40385.3| unnamed protein product [Vitis vinifera]              132   1e-28
ref|XP_002275024.1| PREDICTED: SKP1-like protein 21-like [Vitis ...   132   1e-28
ref|NP_001118876.1| SKP1-like protein 21 [Arabidopsis thaliana] ...   132   1e-28

>ref|XP_002511871.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223549051|gb|EEF50540.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 359

 Score =  134 bits (336), Expect = 3e-29
 Identities = 73/151 (48%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
 Frame = +1

Query: 334 DGTVQEVEQGLALLCPYICHEM-RSGAGSSKSNPISLSPRVKPNSLSLIFDYCRFHGXXX 510
           DG++Q+VEQ +A+ CP ICHE+ + G GSSK+  ISL  RV P  LSLI DYCRFH    
Sbjct: 16  DGSIQQVEQEVAMFCPMICHEIIQKGLGSSKNYAISLPQRVNPAMLSLILDYCRFH---- 71

Query: 511 XXXXXXXXXXXXXXXXXXXXXXXXXXTFDENFLRKDTSSLCELVNAAHYLQLRPLYEKTC 690
                                     +FDE F+R DT  LCEL +AA  LQL+PL + T 
Sbjct: 72  ---------------QVPGRSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTS 116

Query: 691 QAIARKIEDESPEEIRRLFNFPDDLTESEKL 783
           +A+AR IE ++PEEIR +F+ PDDLTE EKL
Sbjct: 117 RALARIIEGKTPEEIREIFHLPDDLTEEEKL 147


>dbj|BAJ99610.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 211

 Score =  132 bits (332), Expect = 8e-29
 Identities = 71/151 (47%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
 Frame = +1

Query: 334 DGTVQEVEQGLALLCPYICHEM-RSGAGSSKSNPISLSPRVKPNSLSLIFDYCRFHGXXX 510
           DG++Q+VE+ +A+ CP IC E+ ++G GSSK++ I+L  RV P+SLSLI DYCRFH    
Sbjct: 24  DGSIQQVEEEVAMFCPMICREIVKNGTGSSKNHAIALPERVNPSSLSLILDYCRFH---- 79

Query: 511 XXXXXXXXXXXXXXXXXXXXXXXXXXTFDENFLRKDTSSLCELVNAAHYLQLRPLYEKTC 690
                                     +FDE F+R DT  LCEL +AA  LQL+PL + T 
Sbjct: 80  ---------------QVPGRSNKERKSFDEKFVRIDTEKLCELTSAADSLQLKPLVDLTS 124

Query: 691 QAIARKIEDESPEEIRRLFNFPDDLTESEKL 783
           +A+AR IE ++PEEIR +F+ PDDLTE EKL
Sbjct: 125 RALARIIEGKTPEEIRDIFHLPDDLTEEEKL 155


>emb|CBI40385.3| unnamed protein product [Vitis vinifera]
          Length = 351

 Score =  132 bits (331), Expect = 1e-28
 Identities = 72/151 (47%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
 Frame = +1

Query: 334 DGTVQEVEQGLALLCPYICHEM-RSGAGSSKSNPISLSPRVKPNSLSLIFDYCRFHGXXX 510
           DG++QEVEQ +A+ CP IC E+ + G GSSK+N I+L  RV P  LSL+ DYCRFH    
Sbjct: 24  DGSIQEVEQEVAMFCPLICDEIIQRGMGSSKNNAITLPQRVNPVMLSLVLDYCRFH---- 79

Query: 511 XXXXXXXXXXXXXXXXXXXXXXXXXXTFDENFLRKDTSSLCELVNAAHYLQLRPLYEKTC 690
                                     +FDE F+R DT  LCEL +AA  LQL+PL + T 
Sbjct: 80  ---------------QVIGRSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTS 124

Query: 691 QAIARKIEDESPEEIRRLFNFPDDLTESEKL 783
           +A+AR IE ++PEEIR  F+ PDDLTE EKL
Sbjct: 125 RALARMIEGKTPEEIRETFHLPDDLTEEEKL 155


>ref|XP_002275024.1| PREDICTED: SKP1-like protein 21-like [Vitis vinifera]
          Length = 388

 Score =  132 bits (331), Expect = 1e-28
 Identities = 72/151 (47%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
 Frame = +1

Query: 334 DGTVQEVEQGLALLCPYICHEM-RSGAGSSKSNPISLSPRVKPNSLSLIFDYCRFHGXXX 510
           DG++QEVEQ +A+ CP IC E+ + G GSSK+N I+L  RV P  LSL+ DYCRFH    
Sbjct: 24  DGSIQEVEQEVAMFCPLICDEIIQRGMGSSKNNAITLPQRVNPVMLSLVLDYCRFH---- 79

Query: 511 XXXXXXXXXXXXXXXXXXXXXXXXXXTFDENFLRKDTSSLCELVNAAHYLQLRPLYEKTC 690
                                     +FDE F+R DT  LCEL +AA  LQL+PL + T 
Sbjct: 80  ---------------QVIGRSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTS 124

Query: 691 QAIARKIEDESPEEIRRLFNFPDDLTESEKL 783
           +A+AR IE ++PEEIR  F+ PDDLTE EKL
Sbjct: 125 RALARMIEGKTPEEIRETFHLPDDLTEEEKL 155


>ref|NP_001118876.1| SKP1-like protein 21 [Arabidopsis thaliana]
           gi|332646678|gb|AEE80199.1| SKP1-like protein 21
           [Arabidopsis thaliana]
          Length = 349

 Score =  132 bits (331), Expect = 1e-28
 Identities = 72/151 (47%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
 Frame = +1

Query: 334 DGTVQEVEQGLALLCPYICHEM-RSGAGSSKSNPISLSPRVKPNSLSLIFDYCRFHGXXX 510
           DG++Q+VEQ +A+ CP IC E+ + G GSSK+  ISL  RV P  LSLIFDYCRFH    
Sbjct: 24  DGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCRFH---- 79

Query: 511 XXXXXXXXXXXXXXXXXXXXXXXXXXTFDENFLRKDTSSLCELVNAAHYLQLRPLYEKTC 690
                                      +DE F+R DT  LCEL +AA  LQL+PL + T 
Sbjct: 80  ---------------QVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTS 124

Query: 691 QAIARKIEDESPEEIRRLFNFPDDLTESEKL 783
           +A+AR IE ++PEEIR +F+ PDDLTE EKL
Sbjct: 125 RALARIIEGKTPEEIREIFHLPDDLTEEEKL 155


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