BLASTX nr result

ID: Bupleurum21_contig00016603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016603
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311372.1| predicted protein [Populus trichocarpa] gi|2...   246   4e-63
ref|XP_002273724.1| PREDICTED: uncharacterized protein LOC100243...   245   7e-63
ref|XP_002885189.1| hypothetical protein ARALYDRAFT_318480 [Arab...   239   3e-61
ref|XP_003546305.1| PREDICTED: uncharacterized protein LOC100790...   239   5e-61
ref|NP_566568.1| Translation elongation factor EF1B/ribosomal pr...   237   1e-60

>ref|XP_002311372.1| predicted protein [Populus trichocarpa] gi|222851192|gb|EEE88739.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  246 bits (627), Expect = 4e-63
 Identities = 133/225 (59%), Positives = 156/225 (69%), Gaps = 7/225 (3%)
 Frame = +2

Query: 38  SFRPENLFRANGFSSNSNLDKTRFGFSISFCSHNMRKSSVIVSAAKKNK-------KEDR 196
           S + ++LF A+G  S        F     F S  +RKS VIV A K NK       K+D 
Sbjct: 22  SIQNKSLFIASGCHS--------FSARPLFLSLGLRKS-VIVEAKKSNKNNNNKKNKQDT 72

Query: 197 HSFVAKPDESAGLFPEAVLLKEKKVQENGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRV 376
           HSFVAKPDE+ G FPEA+LLKEKK QE+G+                            R+
Sbjct: 73  HSFVAKPDEAIGPFPEAILLKEKKAQEDGRVLPEFADAEEEKLFEFLNLELQSELKVERL 132

Query: 377 RHYEVVYMIHEKYVDEVESVNLKVQEFLKEKKGKVWRFSDWGLRRLAYKIQKAKNAHYIL 556
           RHYEVVY+IHEK+ +EV S+N KVQ+F++EKKG++WRF+DWG+RRLAYKIQKAKNAHYIL
Sbjct: 133 RHYEVVYLIHEKHDEEVGSLNEKVQDFVREKKGRIWRFNDWGMRRLAYKIQKAKNAHYIL 192

Query: 557 MNFELEAKDINDFKTMLDKDERVIRHLVIKRDEAITEDCPPPPEF 691
           MNFELEA+ INDFK MLDKDERVIRHLVIKRDEAITEDCPPPPEF
Sbjct: 193 MNFELEARWINDFKNMLDKDERVIRHLVIKRDEAITEDCPPPPEF 237


>ref|XP_002273724.1| PREDICTED: uncharacterized protein LOC100243195 [Vitis vinifera]
           gi|296083213|emb|CBI22849.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  245 bits (625), Expect = 7e-63
 Identities = 126/196 (64%), Positives = 149/196 (76%), Gaps = 2/196 (1%)
 Frame = +2

Query: 110 GFSISFCSHNMRKSSVIVSAAKKNKKE--DRHSFVAKPDESAGLFPEAVLLKEKKVQENG 283
           G+S S  ++ +RKS  +V+ AKK KK+  D H+FV KPDE+ G+FPEAVLLKEKK QE+G
Sbjct: 40  GYS-SISANRLRKS--VVAEAKKRKKDSVDAHNFVPKPDEATGVFPEAVLLKEKKAQEDG 96

Query: 284 KXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRHYEVVYMIHEKYVDEVESVNLKVQEFLK 463
                                        R+RHYEVVY+IHEK+ +EVE+VN KVQ+F++
Sbjct: 97  SFLPEFADAEEEELYEFLNLQLESDLNVERMRHYEVVYLIHEKHDEEVENVNSKVQDFIR 156

Query: 464 EKKGKVWRFSDWGLRRLAYKIQKAKNAHYILMNFELEAKDINDFKTMLDKDERVIRHLVI 643
           EKKGK+WR +DWGLRRLAYKIQKAKNAHYILMNFELEA+ INDFKTMLD+DERVIRHLVI
Sbjct: 157 EKKGKLWRLNDWGLRRLAYKIQKAKNAHYILMNFELEAQWINDFKTMLDQDERVIRHLVI 216

Query: 644 KRDEAITEDCPPPPEF 691
           KRDEAITEDCPPPPEF
Sbjct: 217 KRDEAITEDCPPPPEF 232


>ref|XP_002885189.1| hypothetical protein ARALYDRAFT_318480 [Arabidopsis lyrata subsp.
           lyrata] gi|297331029|gb|EFH61448.1| hypothetical protein
           ARALYDRAFT_318480 [Arabidopsis lyrata subsp. lyrata]
          Length = 313

 Score =  239 bits (611), Expect = 3e-61
 Identities = 127/223 (56%), Positives = 153/223 (68%), Gaps = 2/223 (0%)
 Frame = +2

Query: 29  NLVSFRPENLFRANGFSSNSNLDKTRFGFSISFCSHNMRKSSVIVSAAKK--NKKEDRHS 202
           +LVS RP    R +G  S  N  +     S+        K   +V+AAKK  +KK+D HS
Sbjct: 10  SLVSLRP----RIDGRDSFINPSRVCLNPSLG---RRGSKPLPLVAAAKKKKSKKDDNHS 62

Query: 203 FVAKPDESAGLFPEAVLLKEKKVQENGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRH 382
           F A+PDE+ G FPE++LLKEKK+ E G                             R+RH
Sbjct: 63  FSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYEFLDLQLQSDLNEERMRH 122

Query: 383 YEVVYMIHEKYVDEVESVNLKVQEFLKEKKGKVWRFSDWGLRRLAYKIQKAKNAHYILMN 562
           YEVVY+IHEK+ +EVES+N KVQ+FLKEKKGKVWRFSDWG+RRLAYKIQKA+NAHYILMN
Sbjct: 123 YEVVYLIHEKHAEEVESINQKVQDFLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYILMN 182

Query: 563 FELEAKDINDFKTMLDKDERVIRHLVIKRDEAITEDCPPPPEF 691
           FE+EAK +N+FK +LD DERVIRHLV+KRDEAITEDCPPPPEF
Sbjct: 183 FEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEF 225


>ref|XP_003546305.1| PREDICTED: uncharacterized protein LOC100790128 [Glycine max]
          Length = 323

 Score =  239 bits (609), Expect = 5e-61
 Identities = 122/212 (57%), Positives = 151/212 (71%)
 Frame = +2

Query: 56  LFRANGFSSNSNLDKTRFGFSISFCSHNMRKSSVIVSAAKKNKKEDRHSFVAKPDESAGL 235
           L  ANG+ S+S+L        +S  +   + +SVIVSA KK+KKED HS V KPDE  G 
Sbjct: 43  LLFANGYPSSSSLP-------LSLQNKPRKSASVIVSARKKDKKEDTHSSVPKPDEVTGF 95

Query: 236 FPEAVLLKEKKVQENGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRHYEVVYMIHEKY 415
           FPEAVLLK++ V+E GK                             +RHYEV+Y+IHEK+
Sbjct: 96  FPEAVLLKKRTVEEEGKLLPEFEDAEERQLFEALMLELDSDMDVEILRHYEVMYLIHEKH 155

Query: 416 VDEVESVNLKVQEFLKEKKGKVWRFSDWGLRRLAYKIQKAKNAHYILMNFELEAKDINDF 595
            +EV +VN K+Q+FL+EKKG+VWR +DWG+RRLAYKI+KA NAHY+L+NFEL+AK INDF
Sbjct: 156 EEEVAAVNEKIQDFLREKKGQVWRLNDWGMRRLAYKIKKANNAHYMLINFELDAKYINDF 215

Query: 596 KTMLDKDERVIRHLVIKRDEAITEDCPPPPEF 691
           KT+LD+DERVIRHLVIKRDEAITEDCPPPPEF
Sbjct: 216 KTLLDQDERVIRHLVIKRDEAITEDCPPPPEF 247


>ref|NP_566568.1| Translation elongation factor EF1B/ribosomal protein S6 family
           protein [Arabidopsis thaliana]
           gi|15620810|dbj|BAB67768.1| RPS6-like protein
           [Arabidopsis thaliana] gi|18377866|gb|AAL67119.1|
           AT3g17170/K14A17_29 [Arabidopsis thaliana]
           gi|20856347|gb|AAM26661.1| AT3g17170/K14A17_29
           [Arabidopsis thaliana] gi|332642393|gb|AEE75914.1|
           Translation elongation factor EF1B/ribosomal protein S6
           family protein [Arabidopsis thaliana]
          Length = 314

 Score =  237 bits (605), Expect = 1e-60
 Identities = 125/223 (56%), Positives = 153/223 (68%), Gaps = 2/223 (0%)
 Frame = +2

Query: 29  NLVSFRPENLFRANGFSSNSNLDKTRFGFSISFCSHNMRKSSVIVSAAKK--NKKEDRHS 202
           +LVS RP    R +G  S  N  +     S+        K   +V+AAKK  +KK+D H+
Sbjct: 10  SLVSLRP----RIDGRDSFINPSRVCLNPSLG---RRGSKPLPLVAAAKKKKSKKDDNHN 62

Query: 203 FVAKPDESAGLFPEAVLLKEKKVQENGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRH 382
           F A+PDE+ G FPE++LLKEKK+ E G                             R+RH
Sbjct: 63  FSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYQFLDLQLQSDLNEERMRH 122

Query: 383 YEVVYMIHEKYVDEVESVNLKVQEFLKEKKGKVWRFSDWGLRRLAYKIQKAKNAHYILMN 562
           YEVVY+IHEK+ +EVES+N KVQ++LKEKKGKVWRFSDWG+RRLAYKIQKA+NAHYILMN
Sbjct: 123 YEVVYLIHEKHAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYILMN 182

Query: 563 FELEAKDINDFKTMLDKDERVIRHLVIKRDEAITEDCPPPPEF 691
           FE+EAK +N+FK +LD DERVIRHLV+KRDEAITEDCPPPPEF
Sbjct: 183 FEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEF 225


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