BLASTX nr result

ID: Bupleurum21_contig00016551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016551
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB82027.1| TIR-NBS disease resistance-like protein [Populus ...    83   2e-14
emb|CAC95124.1| TIR/NBS/LRR protein [Populus deltoides]                80   2e-13
ref|XP_003548958.1| PREDICTED: TMV resistance protein N-like [Gl...    79   3e-13
ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance prot...    79   5e-13
gb|ABB82024.1| TIR-NBS disease resistance-like protein [Populus ...    77   1e-12

>gb|ABB82027.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1120

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/132 (35%), Positives = 75/132 (56%)
 Frame = +2

Query: 5   RLVIGVYYGIDPSIVRHQIGSFKDSFEKHETGRFRDKNDQVKEWRRALAGVANFSGLTIS 184
           ++V+ ++Y IDPS VR Q GSF ++F+KHE  RF +K   VKEWR+AL    N SG +++
Sbjct: 103 QIVLPIFYDIDPSDVRKQTGSFAEAFDKHEEERFEEK--LVKEWRKALEDAGNLSGWSLN 160

Query: 185 GKKGVEVDNVEIIKEIAKVIWEHVRPKRLHLGDHFVAREILKDIENTVTASLGSETVKDV 364
                     + IK I K +   +R + L++ +H V  ++  DI + +     S    DV
Sbjct: 161 DM--ANGHEAKFIKGIIKDVLNKLRRECLYVPEHLVGMDLAHDIYDFL-----SNATDDV 213

Query: 365 IKIGLHGLGGVG 400
             +G+HG+ G+G
Sbjct: 214 RIVGIHGMPGIG 225


>emb|CAC95124.1| TIR/NBS/LRR protein [Populus deltoides]
          Length = 1147

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/133 (36%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = +2

Query: 5   RLVIGVYYGIDPSIVRHQIGSFKDSFEKHETGRFRDKNDQVKEWRRALAGVANFSGLTIS 184
           ++V+ ++Y IDPS VR Q GSF ++F KHE  RF +K   VKEWR+AL    N SG  ++
Sbjct: 127 QIVLPIFYDIDPSDVRKQNGSFAEAFVKHEE-RFEEK--LVKEWRKALEEAGNLSGWNLN 183

Query: 185 GKKGVEVDNVEIIKEIAKVIWEHVRPKRLHLGDHFVAR-EILKDIENTVTASLGSETVKD 361
                     + IKEI KV+   + PK L++ +H V   ++ ++I + ++A+       D
Sbjct: 184 DM--ANGHEAKFIKEIIKVVLNKLEPKYLYVPEHLVGMDQLARNIFDFLSAA-----TDD 236

Query: 362 VIKIGLHGLGGVG 400
           V  +G+HG+ G+G
Sbjct: 237 VRIVGIHGMPGIG 249


>ref|XP_003548958.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1049

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
 Frame = +2

Query: 8   LVIGVYYGIDPSIVRHQIGSFKDSFEKHETGRFRDKNDQVKEWRRALAGVANFSGLTISG 187
           LV+ V+Y +DPS VRHQ GS+KD+   H+  RF D  +++++WR +L+  AN +G     
Sbjct: 100 LVLPVFYEVDPSDVRHQRGSYKDALNSHKE-RFNDDQEKLQKWRNSLSQAANLAGYHF-- 156

Query: 188 KKGVEVD-NVEIIKEIAKVIWEHVRPKRLHLGDHFVAREI-LKDIENTVTASLGSETVKD 361
           K G+E +   + I  I K + + +    LH+ D+ V  E  +K++ + +    G      
Sbjct: 157 KHGIENEYEYDFIGNIVKEVSQKINRTVLHVADYTVGLEFRMKEVNSLLNFKSGG----- 211

Query: 362 VIKIGLHGLGGVG 400
           V  +G+HG+GGVG
Sbjct: 212 VHMVGIHGVGGVG 224


>ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago truncatula]
            gi|355490464|gb|AES71667.1| TIR-NBS-LRR-TIR type disease
            resistance protein [Medicago truncatula]
          Length = 1743

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/131 (35%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
 Frame = +2

Query: 11   VIGVYYGIDPSIVRHQIGSFKDSFEKHETGRFRDKNDQVKEWRRALAGVANFSGLTISGK 190
            V  ++YG+DPS VR+Q GSF ++F+KHE  +F +  ++V+ WR AL  VANFSG      
Sbjct: 1441 VFPIFYGVDPSDVRNQRGSFAEAFKKHEE-KFSESKEKVQRWRDALREVANFSGW----- 1494

Query: 191  KGVEVDNVEIIKEIAKVIWEHVRPKRLHLGDHFVAREI-LKDIENTVTASLGSETVKDVI 367
               +    ++I+E+   +W+ +  K     D  VA ++ L+++ +T+   L     +DV 
Sbjct: 1495 DSKDQHETKLIEEVIAQVWKRLELKFPSYNDGLVAIDVRLEELYSTLKLGL-----EDVH 1549

Query: 368  KIGLHGLGGVG 400
             IG+ G+GG+G
Sbjct: 1550 FIGIWGMGGIG 1560



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
 Frame = +2

Query: 11  VIGVYYGIDPSIVRHQIGSFKDSFEKHETGRFRDKNDQVKEWRRALAGVANFSGLTISGK 190
           V  V+YG+DPS VR+Q GSF ++F+KHE  +F +  ++V++WR AL  VAN     +SG 
Sbjct: 101 VFPVFYGVDPSDVRNQRGSFAEAFKKHEE-KFSESKEKVQKWRDALREVAN-----LSGW 154

Query: 191 KGVEVDNVEIIKEIAKVIWEHVRPKRLHLGDHFVAREI-LKDIENTVTASLGSETVKDVI 367
              +    ++I+E+   +W+ +  K     D  VA ++ L+++ +T+   L     +DV 
Sbjct: 155 DSKDQHETKLIEEVIAQVWKRLELKFPSYNDGLVAIDVRLEELYSTLKLGL-----EDVH 209

Query: 368 KIGLHGLGGVG 400
            IG+ G+GG+G
Sbjct: 210 FIGIWGMGGIG 220


>gb|ABB82024.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1078

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/132 (35%), Positives = 74/132 (56%)
 Frame = +2

Query: 5   RLVIGVYYGIDPSIVRHQIGSFKDSFEKHETGRFRDKNDQVKEWRRALAGVANFSGLTIS 184
           ++V+ ++Y IDPS VR Q GSF  +F+KHE  RF +K   VKEWR+AL   AN SG +++
Sbjct: 140 QIVLPIFYDIDPSDVRKQTGSFAKAFDKHEK-RFEEK--LVKEWRKALEDAANLSGRSLN 196

Query: 185 GKKGVEVDNVEIIKEIAKVIWEHVRPKRLHLGDHFVAREILKDIENTVTASLGSETVKDV 364
                     + IK I   +   +R + L++ +H V  ++  DI + +     S    DV
Sbjct: 197 DM--ANGHEAKFIKGIINDVLNKLRRECLYVPEHLVGMDLAHDIYDFL-----STATDDV 249

Query: 365 IKIGLHGLGGVG 400
             +G+HG+ G+G
Sbjct: 250 RIVGIHGMPGIG 261


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