BLASTX nr result

ID: Bupleurum21_contig00016546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016546
         (2035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312505.1| predicted protein [Populus trichocarpa] gi|2...   501   e-139
ref|XP_002314739.1| predicted protein [Populus trichocarpa] gi|2...   498   e-138
ref|XP_004140447.1| PREDICTED: zinc finger CCCH domain-containin...   423   e-116
ref|XP_003532678.1| PREDICTED: zinc finger CCCH domain-containin...   409   e-111
ref|XP_002876801.1| hypothetical protein ARALYDRAFT_484140 [Arab...   324   6e-86

>ref|XP_002312505.1| predicted protein [Populus trichocarpa] gi|222852325|gb|EEE89872.1|
            predicted protein [Populus trichocarpa]
          Length = 721

 Score =  501 bits (1290), Expect = e-139
 Identities = 284/573 (49%), Positives = 356/573 (62%), Gaps = 37/573 (6%)
 Frame = +3

Query: 426  TTAEDEFLKRNTDCVYFLASPLTCKKGSECEYRHSEIARVNPRDCWFWLNGNCLNLKCGF 605
            T+ EDE LKRNTDCVYFLASPLTCKKGSECEYRHSE ARVNPRDC++WLNGNCLN KCGF
Sbjct: 3    TSVEDEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCYYWLNGNCLNPKCGF 62

Query: 606  RHPPLDGLLATQKPAAAGHSFPPSQNIVTPTEQTLLVPGKQAVPCIFFQQGYCLKGDMCP 785
            RHPPLDGL  TQ  A+AG S PPS   V         PGKQAVPCIFFQQG C+KGD C 
Sbjct: 63   RHPPLDGLFGTQAIASAGSSLPPSHTAVASATHAPHNPGKQAVPCIFFQQGICVKGDKCA 122

Query: 786  FMHAPYSSNNKVSQLAAATPVTESQPNKKAFGGLQKSTQEQKDSHNKIQKTVELPVQAKS 965
            F H P  + NKVSQ  A TP  E+ P KKAFGGLQK  QE K    KI K VE P  AK 
Sbjct: 123  FSHGPNLAGNKVSQPMAPTPGAEALPPKKAFGGLQKCAQEHKIPQTKISKAVEAPSVAKP 182

Query: 966  GKKTDMAPLRDVE---------------------------IEKSARRSNHIHQVDRQDNQ 1064
              K ++   R++                            +  +  RS+ +HQ+   D+ 
Sbjct: 183  VSKAEIVHARNIAGVVRSAVPPTSMDGEIPRYKAANLPLMVNGNLSRSSRLHQLQVADDH 242

Query: 1065 SVLNGKDVDEFSRDPSPGFDVLVDGELGESDYYHNEDLYGGTRGHEGRNLNPLNDYELDR 1244
             + NGKD DE+ R+ SPGFDVLVD EL +SDYYH E+  G T G+EGRNLN +++Y+   
Sbjct: 243  VIQNGKDADEYLRESSPGFDVLVDNELRDSDYYHGEEQLGRTTGNEGRNLNSVDEYDTGH 302

Query: 1245 PSDYHSMTDVDRDMYNDPHSYDSYDHRKG-HYGQEHRVSSDXXXXXXXXXXXXXXSIADN 1421
             +DY  + D D++MY DP  YDSY+   G H  ++HR SS+              + AD+
Sbjct: 303  SADYGLLHD-DQEMYRDPRGYDSYELTPGQHAWEQHRASSERMLMAPVLPERRGYAKADS 361

Query: 1422 PDRADKSDLRHHLLKQKRGDGLRSVVTHDRVREYHVDDRIYRPPHR---DHMRARESVLS 1592
            P+  ++SDLR+ L KQ+R +GLRSVV++D V E HV++R YR   R     + + ES +S
Sbjct: 362  PEHTEESDLRYRLSKQRRVNGLRSVVSNDFVPENHVEERGYRGSSRRDSHQLPSHESSIS 421

Query: 1593 SRLRGRIQIPGGSTSHGNKTGSSSERETEKGRHMGRLSPER-----LQGRLKERMKGRLY 1757
            SRLRGRI++PG S ++G      +ERE ++GR+ GRLSP R      QGRL++RMK R+ 
Sbjct: 422  SRLRGRIKLPGRSPNNGGDV--RAEREIDRGRNRGRLSPVRSPVTSQQGRLRDRMKARVE 479

Query: 1758 KDLDSEDRSIRSGSHIRHESKGNVNEDG-VRFTGPKSLSELKFKKNGSYEQHVNDQQLLG 1934
            +D  +E RS R G  +R    G + +DG   F GPKSL+ELK  KN   +     QQ LG
Sbjct: 480  EDY-NEGRSFR-GPQVR----GELMDDGSTDFAGPKSLAELKGGKNAEGKL----QQSLG 529

Query: 1935 KRKYPKLDGAPQHGEGVSFEGPKPLSEILKKKR 2033
            KRK+   +  P     +SFEGP PLSEILK+KR
Sbjct: 530  KRKHS--EDNPSSDAVLSFEGPMPLSEILKRKR 560


>ref|XP_002314739.1| predicted protein [Populus trichocarpa] gi|222863779|gb|EEF00910.1|
            predicted protein [Populus trichocarpa]
          Length = 735

 Score =  498 bits (1283), Expect = e-138
 Identities = 282/572 (49%), Positives = 353/572 (61%), Gaps = 36/572 (6%)
 Frame = +3

Query: 426  TTAEDEFLKRNTDCVYFLASPLTCKKGSECEYRHSEIARVNPRDCWFWLNGNCLNLKCGF 605
            T+AE+E LKRNTDCVYFLASPLTCKKGSECEYRHSE ARVNPRDC+FWLNGNC+N KCGF
Sbjct: 18   TSAEEEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCYFWLNGNCMNPKCGF 77

Query: 606  RHPPLDGLLATQKPAAAGHSFPPSQNIVTPTEQTLLVPGKQAVPCIFFQQGYCLKGDMCP 785
            RHPPLDGL   Q  A+AG S PPS              GKQ V CIFFQQG CLKGD C 
Sbjct: 78   RHPPLDGLFGNQTTASAGSSLPPSHAAAAAATHAPHNSGKQGVLCIFFQQGICLKGDRCA 137

Query: 786  FMHAPYSSNNKVSQLAAATPVTESQPNKKAFGGLQKSTQEQKDSHNKIQKTVELPVQAKS 965
            F H P  ++N+VSQ  A TP TE+ P +KAFGGLQK TQEQK     + K VE P  AK 
Sbjct: 138  FSHGPNHASNRVSQTMAFTPGTEAHPPEKAFGGLQKCTQEQKLPQVNLSKAVEPPTVAKP 197

Query: 966  GKKTDMAPLRD---------------------------VEIEKSARRSNHIHQVDRQDNQ 1064
              K ++A  R+                            E+  ++ RSN +H     D+ 
Sbjct: 198  VSKAEIASARNSAGVARNVVPPKSTDDEVPRYKSSNLPPEVNGNSSRSNQLHLSRVADDH 257

Query: 1065 SVLNGKDVDEFSRDPSPGFDVLVDGELGESDYYHNEDLYGGTRGHEGRNLNPLNDYELDR 1244
               NGKD DE+ R+ SPGFDVLVD EL +SDYYH ED +G T GHEGRNLN +++Y    
Sbjct: 258  VNHNGKDADEYLRESSPGFDVLVDDELRDSDYYHGEDQFGRTIGHEGRNLNSVDEYGRGH 317

Query: 1245 PSDYHSMTDVDRDMYNDPHSYDSYDHRKG-HYGQEHRVSSDXXXXXXXXXXXXXXSIADN 1421
            P+DY S+ D D++ Y DP  YD Y+H +G H  ++HR SS+              S AD+
Sbjct: 318  PADYGSLPD-DQERYGDPRGYDPYEHMQGQHAWEQHRASSERMLVAPAHLERRGYSKADS 376

Query: 1422 PDRADKSDLRHHLLKQKRGDGLRSVVTHDRVREYHVDDRIYRPPHR---DHMRARESVLS 1592
            P+  + SDLR+ L KQ+R +GLRSVV++D V   HV++R Y+   R    H+ + ES +S
Sbjct: 377  PEHIEGSDLRYLLSKQRRVNGLRSVVSNDFVPGNHVEERGYQGSSRRDSHHLLSHESPIS 436

Query: 1593 SRLRGRIQIPGGSTSHGNKTGSSSERETEKGRHMGRLSPER-----LQGRLKERMKGRLY 1757
            SRLRGRI++PGGS + G      +ERE ++GR+ GRLSP R      QGR ++RMK R+ 
Sbjct: 437  SRLRGRIKLPGGSPNEGGDL--HAEREIDRGRNRGRLSPVRSLISSQQGRFRDRMKARVE 494

Query: 1758 KDLDSEDRSIRSGSHIRHESKGNVNEDGVRFTGPKSLSELKFKKNGSYEQHVNDQQLLGK 1937
            +D  +E R+ R G H+R E    V++    F  PK L+EL+  KN   +     QQ LGK
Sbjct: 495  EDY-NEGRNFR-GPHVRREL---VDDKITNFAAPKRLAELRGGKNAEGK----SQQSLGK 545

Query: 1938 RKYPKLDGAPQHGEGVSFEGPKPLSEILKKKR 2033
            RKY  L+  P     +SFEGP PLSEILK+KR
Sbjct: 546  RKY--LEDHPPSDADLSFEGPMPLSEILKRKR 575


>ref|XP_004140447.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
            [Cucumis sativus] gi|449487921|ref|XP_004157867.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            17-like [Cucumis sativus]
          Length = 721

 Score =  423 bits (1088), Expect = e-116
 Identities = 256/574 (44%), Positives = 326/574 (56%), Gaps = 38/574 (6%)
 Frame = +3

Query: 426  TTAEDEFLKRNTDCVYFLASPLTCKKGSECEYRHSEIARVNPRDCWFWLNGNCLNLKCGF 605
            + AE+E +KRNTDCVYFLASPLTCKKGSECEYRHSE ARVNPRDCWFWLNGNCLN KC F
Sbjct: 21   SAAEEEAIKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWFWLNGNCLNPKCSF 80

Query: 606  RHPPLDGLLATQKPAAAGHSFPPSQNIVTPTEQTLLVP---GKQAVPCIFFQQGYCLKGD 776
            RHPPLDGL+ T       HS  PS  I + T      P    KQAVPCIFFQ+G CLKGD
Sbjct: 81   RHPPLDGLVGTP------HSTTPSSQIPSQTAAIPSTPVNSSKQAVPCIFFQKGLCLKGD 134

Query: 777  MCPFMHAPYS-SNNKVSQLAAATPVTESQPNKKAFGGLQKSTQEQKDSHNKIQKTV---- 941
             C F+H P S   NKV Q+ A     E    KK  GG Q+S+QEQK       K++    
Sbjct: 135  RCAFLHGPPSVQTNKVPQMGANAQAGEPPSVKKVSGGTQRSSQEQKIPQANFLKSISGSS 194

Query: 942  ------ELPVQAKSGKKTDM----APLRD------------VEIEKSARRSNHIHQVDRQ 1055
                  +  V +K GK  +     A + D               E S  R+N + Q    
Sbjct: 195  VKIATKDETVPSKIGKLNEKSIPPAEMADGGSRYKTTNALPTINECSLSRANRLQQSHVI 254

Query: 1056 DNQSVLNGKDVDEFSRDPSPGFDVLVDGELGESDYYHNEDLYGGTRGHEGRNLNPLNDYE 1235
            D+  + NGKD DEF ++ SPGFDVLVD EL  S YY +E+ YG +RGHEG N+  +NDY+
Sbjct: 255  DDHGLQNGKDADEFLKESSPGFDVLVDDELRGSGYYGSEEQYGRSRGHEGGNMTSMNDYD 314

Query: 1236 LDRPSDYHSMTDVDRDMYNDPHSYDSYDHRKGHYGQEH-RVSSDXXXXXXXXXXXXXXSI 1412
            ++  +DY  M DVD D+YND   YD    + G YG +H R SSD                
Sbjct: 315  INHSADYKMMGDVDHDVYNDVTDYDYESRQGGQYGWDHRRTSSDKLSLSSAQMERRIFPK 374

Query: 1413 ADNPDRADKSDLRHHLLKQKRGDGLRSVVTHDRVREYHVDDRIYRPPHRDHMRARESVLS 1592
            +++P+     DLRH L KQ+RG+GLRSV+ ++       ++R YR   RD   ++ES +S
Sbjct: 375  SNSPEHVQNVDLRHRLNKQRRGNGLRSVINNENAAS-RPEERNYRSSRRDSHSSQESTVS 433

Query: 1593 SRLRGRIQIPGGSTSHGNKTGSSSERETEKGRHMGRLSPERL-----QGRLKERMKGRLY 1757
            +RLRGRI++P    S    +    ER+  +GR  GR SP R      QG  ++ +KGRL 
Sbjct: 434  NRLRGRIKLP-RIPSPVRSSDIRPERDLNRGRPWGRSSPGRSQSLSNQGSNRDEIKGRLE 492

Query: 1758 KDLDSEDRSIRSGSHIRHESKGNVNEDGVRFTGPKSLSELKFKKNGSYEQHV--NDQQLL 1931
            +D ++E R+    +  R  + G  +     F  PKSL+ELK  K      H+   +QQ L
Sbjct: 493  EDYNNERRTFNGFNSRRERTDGTSD-----FAAPKSLAELKGDK------HIVSKEQQTL 541

Query: 1932 GKRKYPKLDGAPQHGEGVSFEGPKPLSEILKKKR 2033
            GKRK   +D   Q G  +SFEGPK LSEILK+KR
Sbjct: 542  GKRKGFDID---QSGGELSFEGPKSLSEILKRKR 572


>ref|XP_003532678.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
            [Glycine max]
          Length = 710

 Score =  409 bits (1052), Expect = e-111
 Identities = 260/589 (44%), Positives = 333/589 (56%), Gaps = 54/589 (9%)
 Frame = +3

Query: 429  TAEDEFLKRNTDCVYFLASPLTCKKGSECEYRHSEIARVNPRDCWFWLNGNCLNLKCGFR 608
            +++DE LKRNTDCVYFLASPLTCKKG+ECEYRHSE ARVNPRDC +WL+GNCLN KC FR
Sbjct: 19   SSQDEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCRYWLSGNCLNPKCPFR 78

Query: 609  HPPLDGLLATQKPAAAGHSFPPSQNIVTPTEQTLLVP---GKQAVPCIFFQQGYCLKGDM 779
            HPPLDGLL TQ  AA G S PPSQ    PT      P    KQAVPC FFQ+G CLKGD 
Sbjct: 79   HPPLDGLLGTQATAAGGPSVPPSQ---IPTASAAHAPYNSSKQAVPCYFFQKGLCLKGDR 135

Query: 780  CPFMHAP----YSSNNKVSQLAAATPVT----ESQPNKKAFGGLQKSTQEQKDSHNKIQK 935
            C F+H P     S+ NKV   AA  PVT    E+   KK F   +K TQE+K S     K
Sbjct: 136  CAFLHGPPAPTPSTGNKV---AAQVPVTIQGAENPSFKKPFVSNEKYTQERKTSQGNFAK 192

Query: 936  TVELPVQAKSGKKTDMAPLRDV-EIEKS---------------------------ARRSN 1031
            +   P +AK   K + AP R++ E+EK                              RSN
Sbjct: 193  SGGAP-EAKPSPKIETAPQRNMFELEKKVPPPSAEFNNEASRFKTISPPVTNGPIVARSN 251

Query: 1032 HIHQVDRQDNQSVLNGKDVDEFSRDPSPGFDVLVDGELGESDYYHNEDLYGGTRGHEGRN 1211
             +HQ    D+ +  +GKD DEF R+ SPGFDVLV  EL  SDYYH ED +G  RG + RN
Sbjct: 252  RLHQARVPDDHNFQSGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEFGKARGQDERN 311

Query: 1212 LNPLNDYELDRPSDYHSMTDVDRDMYNDPHSYDSYDHRKGHYG-QEHRVSSDXXXXXXXX 1388
            L+ LN+Y+L    DY    D+DR+ +  P  Y+SYDH +  Y  ++HR  S         
Sbjct: 312  LDSLNEYDLGHSGDYSLAADIDRERFRGPQGYESYDHMQEPYAWEQHRKPSSHLGRRTRR 371

Query: 1389 XXXXXXSIADNPDRADKSDLRHHLLKQKRGDGLRSVVTHDRVREYHVDDRIYRPPHRD-- 1562
                    +D+P+ A+ SDLRHHL K+++G+GL+SV++HD     H +++  R   R   
Sbjct: 372  R-------SDSPENAEVSDLRHHLSKRRKGNGLKSVISHDHAHGGHGEEQSRRSFSRKDS 424

Query: 1563 -HMRARESVLSSRLRGRIQIPGGSTSHGNKTGSSSERETEKGRHMGRLSPERL------- 1718
              +   ES L +R RGRI++P       N  G   ERE + GR   RL   RL       
Sbjct: 425  LELPLNESSLGNRFRGRIKLP------ENGDGDHPERE-DGGRFRNRLPSGRLPATHHLS 477

Query: 1719 --QGRLKERMKGRLYKD--LDSEDRSIRSGSHIRHESKGNVNEDGVRFTGPKSLSELKFK 1886
              +GR+ +R++GRL  D   +S+DR       +  E  G+ ++    F  PKSLSEL   
Sbjct: 478  PREGRVHDRIRGRLQDDERRNSKDRL------MGRELPGDRSD----FAAPKSLSEL--- 524

Query: 1887 KNGSYEQHVNDQQLLGKRKYPKLDGAPQHGEGVSFEGPKPLSEILKKKR 2033
            KNG   ++  +QQ LG+R+  + D  PQ  +   FEGPKPLSEILK+KR
Sbjct: 525  KNGRNTEN-REQQSLGRRRSLR-DDHPQSDDDFLFEGPKPLSEILKEKR 571


>ref|XP_002876801.1| hypothetical protein ARALYDRAFT_484140 [Arabidopsis lyrata subsp.
            lyrata] gi|297322639|gb|EFH53060.1| hypothetical protein
            ARALYDRAFT_484140 [Arabidopsis lyrata subsp. lyrata]
          Length = 676

 Score =  324 bits (830), Expect = 6e-86
 Identities = 218/565 (38%), Positives = 298/565 (52%), Gaps = 29/565 (5%)
 Frame = +3

Query: 426  TTAEDEFLKRNTDCVYFLASPLTCKKGSECEYRHSEIARVNPRDCWFWLNGNCLNLKCGF 605
            ++AE++ LK NTDCVYFLASPLTCKKG ECEYRHSE AR+NPRDC++WLNGNC+N KCGF
Sbjct: 22   SSAEEDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCMNPKCGF 81

Query: 606  RHPPLDGLLATQKPAAAGHSFPPSQNIVTPTEQTLLVPG--KQAVPCIFFQQGYCLKGDM 779
            RHPPL+GLL  Q  A AG         V PT  T+   G  KQ VPC+FFQ+G C+KGDM
Sbjct: 82   RHPPLEGLLGNQGGAPAGS--------VQPTHATVQHSGVAKQPVPCVFFQKGMCMKGDM 133

Query: 780  CPFMHAPYSSNNKVSQLAAATPVTESQPNKKAFGGLQKSTQEQKDSHNKIQKTVELPVQA 959
            C F+H P  +  K      A P  + Q +KK    ++ +T E+K +   + K V+  V  
Sbjct: 134  CSFLHTPNPAAYKKLLPVEAKPAADPQFSKKP---IENNTGEKKFADANLSKAVKAHVDI 190

Query: 960  KSGKKTDMAPLRD-------------------------VEIEKSARRSNHIHQVDRQDNQ 1064
             +  +   A LRD                             +    +  +H+    DN 
Sbjct: 191  SAAPRVTSAGLRDSRRVEGYVPEHMGYDPVVQKKGTGVPSFTEGGHSTQLLHKYGSDDNN 250

Query: 1065 SVLNGKDVDEFSRDPSPGFDVLVDGELGESDYYHNEDLYGGTRGHEGRNLNPLNDYELDR 1244
            S  NGKD D+  R+ SPGFDVLVD E  +S+YY  ED Y G R  EG   N +N+Y+   
Sbjct: 251  SFHNGKDADDVLRESSPGFDVLVDNEARDSEYYRVEDRY-GRRSQEGG--NSVNEYD--- 304

Query: 1245 PSDYHSMTDVDRDMYNDPHSYDSYDHRKGHYG-QEHRVSSDXXXXXXXXXXXXXXSIADN 1421
              D+ ++ D D   ++D   +D YD R+  Y     RVSS+                 + 
Sbjct: 305  -PDFSAIAD-DEKAFHD-QRFDPYDQREDRYAWGNRRVSSERGDHSERRVYAED----ER 357

Query: 1422 PDRADKSDLRHHLLKQKRGDGLRSVVTHDRVREYHVDDRIYRPPHRDHMRARESVLSSRL 1601
             +    SDLR+ L KQ++ +G+RSV +HD        +R YR   RD +R   S+ SSRL
Sbjct: 358  SENILASDLRYRLAKQRKVNGVRSVGSHDYGAPDSSVERGYRDSRRDTLR-ENSISSSRL 416

Query: 1602 RGRIQIPGGSTSHGNKTGSSSERETEKGRHMGRLSPERLQGRLKERMKGRLYKD-LDSED 1778
            +GRI++     S+G++ G   +R  E+GR    LS    QGRL++R+KGRL ++   +++
Sbjct: 417  QGRIKL--RERSNGDE-GHHFDRRNERGRDRSELSS---QGRLRDRIKGRLEENHSGNQE 470

Query: 1779 RSIRSGSHIRHESKGNVNEDGVRFTGPKSLSELKFKKNGSYEQHVNDQQLLGKRKYPKLD 1958
            R  R+    R E +        R   PKS++E K     S  +    +  LGKRK  + D
Sbjct: 471  RGFRAPWARRREMEDE------RKPAPKSIAETK-----STREESKPELSLGKRKSFEED 519

Query: 1959 GAPQHGEGVSFEGPKPLSEILKKKR 2033
                   G SF  P P SEILK+KR
Sbjct: 520  HHSHKRSGDSFAAPLPFSEILKRKR 544


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