BLASTX nr result

ID: Bupleurum21_contig00016536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016536
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl...   185   1e-44
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...   184   1e-44
ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...   184   1e-44
ref|XP_003541607.1| PREDICTED: DNA repair and recombination prot...   183   4e-44
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...   181   2e-43

>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
          Length = 883

 Score =  185 bits (469), Expect = 1e-44
 Identities = 88/120 (73%), Positives = 101/120 (84%)
 Frame = +3

Query: 3    VFFGSIKACSEGISLVGASRIIILDIHLNPSVTRQAIGRAFRPGQLRKVYTYRLVAAESP 182
            VFFGSIKAC EGISLVGASRIIILD+HLNPSVTRQAIGRAFRPGQ++KV+ YRLV+A+SP
Sbjct: 764  VFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQMKKVFVYRLVSADSP 823

Query: 183  EQEDHLTCFKKESIPKLWFEWNGACHPEDFHMEKVAVTDCGDDFLETPRLHEDVVSLYRR 362
            E+EDH TCFKKE I K+WFEWN  C    F +E V V +CGD FLE+P L EDV +LY+R
Sbjct: 824  EEEDHNTCFKKELISKMWFEWNEYCGDRAFEVEAVEVKECGDLFLESPLLGEDVKALYKR 883


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  184 bits (468), Expect = 1e-44
 Identities = 89/120 (74%), Positives = 98/120 (81%)
 Frame = +3

Query: 3    VFFGSIKACSEGISLVGASRIIILDIHLNPSVTRQAIGRAFRPGQLRKVYTYRLVAAESP 182
            VFFGSIKAC EGISLVGASRIIILD+HLNPSVTRQAIGRAFRPGQ +KV+ YRLVA +SP
Sbjct: 784  VFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVFAYRLVAGDSP 843

Query: 183  EQEDHLTCFKKESIPKLWFEWNGACHPEDFHMEKVAVTDCGDDFLETPRLHEDVVSLYRR 362
            E+ DH TCFKKE I K+WFEWN  C   DF +E V V  CGD+FLETP L +DV  LYRR
Sbjct: 844  EEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETVDVKQCGDNFLETPLLGQDVKVLYRR 903


>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  184 bits (468), Expect = 1e-44
 Identities = 89/120 (74%), Positives = 98/120 (81%)
 Frame = +3

Query: 3    VFFGSIKACSEGISLVGASRIIILDIHLNPSVTRQAIGRAFRPGQLRKVYTYRLVAAESP 182
            VFFGSIKAC EGISLVGASRIIILD+HLNPSVTRQAIGRAFRPGQ +KV+ YRLVA +SP
Sbjct: 784  VFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVFAYRLVAGDSP 843

Query: 183  EQEDHLTCFKKESIPKLWFEWNGACHPEDFHMEKVAVTDCGDDFLETPRLHEDVVSLYRR 362
            E+ DH TCFKKE I K+WFEWN  C   DF +E V V  CGD+FLETP L +DV  LYRR
Sbjct: 844  EEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETVDVKQCGDNFLETPLLGQDVKVLYRR 903


>ref|XP_003541607.1| PREDICTED: DNA repair and recombination protein RDH54-like [Glycine
            max]
          Length = 1001

 Score =  183 bits (464), Expect = 4e-44
 Identities = 87/120 (72%), Positives = 101/120 (84%)
 Frame = +3

Query: 3    VFFGSIKACSEGISLVGASRIIILDIHLNPSVTRQAIGRAFRPGQLRKVYTYRLVAAESP 182
            VFFGSIKAC EGISLVGASRIIILD+HLNPSVTRQAIGRAFRPGQ +KV+ YRLV+A+SP
Sbjct: 865  VFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKKVFVYRLVSADSP 924

Query: 183  EQEDHLTCFKKESIPKLWFEWNGACHPEDFHMEKVAVTDCGDDFLETPRLHEDVVSLYRR 362
            E+EDH TCFKKE I K+WFEWN  C  + F +E+V V +C D FLE+P L EDV +LY+R
Sbjct: 925  EEEDHSTCFKKELISKMWFEWNEYCGDQAFEVEEVGVKECDDLFLESPLLGEDVKALYKR 984


>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 944

 Score =  181 bits (458), Expect = 2e-43
 Identities = 86/120 (71%), Positives = 99/120 (82%)
 Frame = +3

Query: 3    VFFGSIKACSEGISLVGASRIIILDIHLNPSVTRQAIGRAFRPGQLRKVYTYRLVAAESP 182
            VFFGSIKAC EGISLVGASR++ILD+HLNPSVTRQAIGRAFRPGQ +KV+ Y+LVAA+SP
Sbjct: 825  VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQKKKVHVYKLVAADSP 884

Query: 183  EQEDHLTCFKKESIPKLWFEWNGACHPEDFHMEKVAVTDCGDDFLETPRLHEDVVSLYRR 362
            E+EDH TCFKKE I K+WFEWN  C   +F  E V V+D GD FLE+P L EDV  LY+R
Sbjct: 885  EEEDHNTCFKKELISKMWFEWNEYCGNHEFEAETVNVSDSGDLFLESPLLREDVTVLYKR 944


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