BLASTX nr result

ID: Bupleurum21_contig00016534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016534
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320393.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_002516785.1| conserved hypothetical protein [Ricinus comm...    60   2e-07

>ref|XP_002320393.1| predicted protein [Populus trichocarpa] gi|222861166|gb|EEE98708.1|
           predicted protein [Populus trichocarpa]
          Length = 64

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 31/48 (64%), Positives = 42/48 (87%)
 Frame = -1

Query: 414 KVQMAANSLSIGCSKIRSWQRCSKRVRQQRGRLYIIWRCTVLLMNWQE 271
           K+QMAA++LS+   K+RSWQRCSK++R+QR RLYIIWRCTV+L+ W +
Sbjct: 17  KIQMAADALSMRSMKLRSWQRCSKQIREQRTRLYIIWRCTVMLLCWHD 64


>ref|XP_002516785.1| conserved hypothetical protein [Ricinus communis]
           gi|223543873|gb|EEF45399.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 66

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = -1

Query: 372 KIRSWQRCSKRVRQQRGRLYIIWRCTVLLMNWQE 271
           K RSWQRCS+ V++QR RLYIIWRCTV+L++W +
Sbjct: 13  KFRSWQRCSRLVKEQRTRLYIIWRCTVILLSWDD 46


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