BLASTX nr result

ID: Bupleurum21_contig00016518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016518
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM89261.1|AF527800_1 expansin 3 [Malus x domestica]               297   2e-78
ref|XP_002533125.1| Alpha-expansin 5 precursor, putative [Ricinu...   295   6e-78
gb|ABP48816.1| alpha expansin protein 2 [Calotropis procera]          295   1e-77
dbj|BAH36863.1| alpha expansin [Rosa hybrid cultivar]                 294   1e-77
gb|AFZ78601.1| expansin protein [Populus tomentosa]                   294   2e-77

>gb|AAM89261.1|AF527800_1 expansin 3 [Malus x domestica]
          Length = 241

 Score =  297 bits (760), Expect = 2e-78
 Identities = 140/197 (71%), Positives = 151/197 (76%)
 Frame = +3

Query: 225 GVIAVCFISLVSSVNGYYNRGWINAHATFYXXXXXXXXXXXXXXYGNLYRQGYGTNTAAL 404
           G++ + F+SLVSSVNGYY  GW NAHATFY              YGNLY QGYGTNTAAL
Sbjct: 5   GILVIGFLSLVSSVNGYYG-GWSNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 63

Query: 405 STAMFNNGLSCGACFQIVCVNDRQWCLRGAITVTATNFCPPGGWCDPPHHHFDLSQPVFL 584
           STA+FNNGL+CGAC+QI CVND QWCL G+I VTATNFCPPGGWCDPP  HFDLSQPVFL
Sbjct: 64  STALFNNGLTCGACYQIRCVNDPQWCLPGSIIVTATNFCPPGGWCDPPQQHFDLSQPVFL 123

Query: 585 RIAQYRAGXXXXXXXXXXXXXXXXXXFTINGHSYFNLVLVTNVGGAGDVHAVYIKGSRTR 764
           RIAQY+AG                  FT+NGHSYFNLVLVTNVGGAGDV +V IKGSRTR
Sbjct: 124 RIAQYKAGVVPVSYRRVRCRRRGGIRFTVNGHSYFNLVLVTNVGGAGDVQSVAIKGSRTR 183

Query: 765 WQAMSRNWGQNWQSNSY 815
           WQAMSRNWGQNWQSNSY
Sbjct: 184 WQAMSRNWGQNWQSNSY 200


>ref|XP_002533125.1| Alpha-expansin 5 precursor, putative [Ricinus communis]
           gi|223527088|gb|EEF29270.1| Alpha-expansin 5 precursor,
           putative [Ricinus communis]
          Length = 241

 Score =  295 bits (756), Expect = 6e-78
 Identities = 139/201 (69%), Positives = 152/201 (75%)
 Frame = +3

Query: 213 LEISGVIAVCFISLVSSVNGYYNRGWINAHATFYXXXXXXXXXXXXXXYGNLYRQGYGTN 392
           + + G + V F+S+VSSV+GYY  GWINAHATFY              YGNLY QGYG N
Sbjct: 1   MALLGFLLVGFLSIVSSVHGYYG-GWINAHATFYGGGDASGTMGGACGYGNLYSQGYGIN 59

Query: 393 TAALSTAMFNNGLSCGACFQIVCVNDRQWCLRGAITVTATNFCPPGGWCDPPHHHFDLSQ 572
           TAALSTA+F+NGLSCGACF++ CVND QWCL G ITVTATNFCPPGGWCDPP+HHFDLSQ
Sbjct: 60  TAALSTALFDNGLSCGACFELRCVNDPQWCLPGTITVTATNFCPPGGWCDPPNHHFDLSQ 119

Query: 573 PVFLRIAQYRAGXXXXXXXXXXXXXXXXXXFTINGHSYFNLVLVTNVGGAGDVHAVYIKG 752
           P+F  IAQYRAG                  F INGHSYFNLVL+TNVGGAGDVHAV IKG
Sbjct: 120 PIFEHIAQYRAGIVPVAYRRVRCKRSGGIRFAINGHSYFNLVLITNVGGAGDVHAVSIKG 179

Query: 753 SRTRWQAMSRNWGQNWQSNSY 815
           SRTRWQAMSRNWGQNWQSNSY
Sbjct: 180 SRTRWQAMSRNWGQNWQSNSY 200


>gb|ABP48816.1| alpha expansin protein 2 [Calotropis procera]
          Length = 262

 Score =  295 bits (754), Expect = 1e-77
 Identities = 138/195 (70%), Positives = 151/195 (77%)
 Frame = +3

Query: 231 IAVCFISLVSSVNGYYNRGWINAHATFYXXXXXXXXXXXXXXYGNLYRQGYGTNTAALST 410
           + + F + +SSV+GYY  GWINAHATFY              YGNLY QGYGT TAALST
Sbjct: 13  LLLLFSTTISSVHGYYG-GWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTATAALST 71

Query: 411 AMFNNGLSCGACFQIVCVNDRQWCLRGAITVTATNFCPPGGWCDPPHHHFDLSQPVFLRI 590
           A+FNNGLSCGACFQ+VCVND QWCLRG+I VTATNFCPPGGWCDPP+HHFDLSQP FL+I
Sbjct: 72  ALFNNGLSCGACFQLVCVNDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPAFLQI 131

Query: 591 AQYRAGXXXXXXXXXXXXXXXXXXFTINGHSYFNLVLVTNVGGAGDVHAVYIKGSRTRWQ 770
           AQYRAG                  F+INGHSYFNLVLVTNVGGAGDV AVYIKGSRT+WQ
Sbjct: 132 AQYRAGIVPVAYRRVPCRRRGGIRFSINGHSYFNLVLVTNVGGAGDVRAVYIKGSRTQWQ 191

Query: 771 AMSRNWGQNWQSNSY 815
           +MSRNWGQNWQSNSY
Sbjct: 192 SMSRNWGQNWQSNSY 206


>dbj|BAH36863.1| alpha expansin [Rosa hybrid cultivar]
          Length = 242

 Score =  294 bits (753), Expect = 1e-77
 Identities = 135/197 (68%), Positives = 149/197 (75%)
 Frame = +3

Query: 225 GVIAVCFISLVSSVNGYYNRGWINAHATFYXXXXXXXXXXXXXXYGNLYRQGYGTNTAAL 404
           G++ + F+S++SSVNGYY  GW NAHATFY              YGNLY QGYGTNTAAL
Sbjct: 5   GILLIGFVSVLSSVNGYYYAGWSNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 64

Query: 405 STAMFNNGLSCGACFQIVCVNDRQWCLRGAITVTATNFCPPGGWCDPPHHHFDLSQPVFL 584
           STA+FNNGL+CGAC+++ CVND QWCL G I VTATNFCPPGGWCDPP  HFDLSQPVFL
Sbjct: 65  STALFNNGLTCGACYELRCVNDPQWCLPGTIVVTATNFCPPGGWCDPPQQHFDLSQPVFL 124

Query: 585 RIAQYRAGXXXXXXXXXXXXXXXXXXFTINGHSYFNLVLVTNVGGAGDVHAVYIKGSRTR 764
           +IAQYRAG                  FT+NGHSYFNLVLVTNVGGAGDV +V IKGSRTR
Sbjct: 125 KIAQYRAGVVPVSYRRVRCRRAGGIRFTVNGHSYFNLVLVTNVGGAGDVQSVAIKGSRTR 184

Query: 765 WQAMSRNWGQNWQSNSY 815
           WQ MSRNWGQNWQSNSY
Sbjct: 185 WQLMSRNWGQNWQSNSY 201


>gb|AFZ78601.1| expansin protein [Populus tomentosa]
          Length = 241

 Score =  294 bits (752), Expect = 2e-77
 Identities = 139/201 (69%), Positives = 152/201 (75%)
 Frame = +3

Query: 213 LEISGVIAVCFISLVSSVNGYYNRGWINAHATFYXXXXXXXXXXXXXXYGNLYRQGYGTN 392
           +++ G + V F+S VSSV+GYY  GWINAHATFY              YGNLY QGYGTN
Sbjct: 1   MDLLGFLLVGFLSSVSSVHGYYG-GWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 59

Query: 393 TAALSTAMFNNGLSCGACFQIVCVNDRQWCLRGAITVTATNFCPPGGWCDPPHHHFDLSQ 572
           TAALSTA+F+NGLSCGACF+I CVND QWCL G I VTATNFCPPGGWCDPP+HHFDLSQ
Sbjct: 60  TAALSTALFDNGLSCGACFEIRCVNDPQWCLPGVIVVTATNFCPPGGWCDPPNHHFDLSQ 119

Query: 573 PVFLRIAQYRAGXXXXXXXXXXXXXXXXXXFTINGHSYFNLVLVTNVGGAGDVHAVYIKG 752
           PVF  IAQYRAG                  FTINGHSYFNLVL+TNVGGAGDVH+V IKG
Sbjct: 120 PVFQHIAQYRAGIVPVIYRRVRCRRSGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIKG 179

Query: 753 SRTRWQAMSRNWGQNWQSNSY 815
           SRT WQ+MSRNWGQNWQSNSY
Sbjct: 180 SRTGWQSMSRNWGQNWQSNSY 200


Top