BLASTX nr result

ID: Bupleurum21_contig00016510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016510
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32504.3| unnamed protein product [Vitis vinifera]              105   5e-21
emb|CAN82365.1| hypothetical protein VITISV_027616 [Vitis vinifera]   101   7e-20
emb|CAN76392.1| hypothetical protein VITISV_011465 [Vitis vinifera]    67   1e-09
ref|XP_003631681.1| PREDICTED: uncharacterized protein LOC100853...    61   1e-07
ref|NP_200822.1| AP2/B3 domain-containing protein [Arabidopsis t...    59   3e-07

>emb|CBI32504.3| unnamed protein product [Vitis vinifera]
          Length = 1085

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/134 (38%), Positives = 81/134 (60%), Gaps = 6/134 (4%)
 Frame = -2

Query: 405  SNEKANCS------LSSKRLDDEAIFDLGIVGRPKNPYFVTKLDPKRMSDLRIPKEVIRD 244
            ++E++NC+       S+ ++++   F++  +  P+NPYF TK+ P R S L +P +V+RD
Sbjct: 790  ASEESNCTKRKYKEASAVQVEENIAFEIESIVNPQNPYFETKVRPARRSKLYVPLDVLRD 849

Query: 243  FALRLPKLIDICDKDGRVWGAVVKKWHDGRHCITKGWRAFCKWNGVKPDDKCVCEFVPGN 64
              ++LP  + + D  GR+W   V  W DGR  I  GW+ FCKWN V  +D C+CEFV  +
Sbjct: 850  HNIKLPPKMTLRDPLGRLWIGKVAVWKDGRTWI--GWKPFCKWNNVGENDTCICEFVQES 907

Query: 63   GESKFQLNVCIVRA 22
            G   + L V I+RA
Sbjct: 908  GHEGYLLVVHILRA 921



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = -2

Query: 345 DLGIVGRPKNPYFVTKLDPKRMSDLRIPKEVIRDFALRLPKLIDICDKDGRVWGAVVKKW 166
           D   + +P+NP F+TK+ P R S L +P ++++D  + LP  + +CD  GR W   V  W
Sbjct: 245 DFKSIVKPENPCFITKIRPGRRSKLYVPVDILKDHNIALPPRVLLCDPHGRSWPGDVTIW 304

Query: 165 HDGRHCITKGWRAFCKWNGVKPDDKCVCEFVPGNG 61
            DGR  I  GWRAFCKWN V  +D C+CEFV  +G
Sbjct: 305 KDGRTWI-GGWRAFCKWNHVGENDSCICEFVQESG 338



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = -2

Query: 303 TKLDPKRMSDLR---IPKEVIRDFALRLPKLIDICDKDGRVWGAVVKKWHDGRHCITKGW 133
           TK + K+ S  +   +P ++++DF + LP  + + D  GR W   V  W DGR  I  GW
Sbjct: 545 TKSNYKKASSSQAEYVPADILQDFNIALPPRVLLRDLHGRSWPGDVSVWKDGRTWI-GGW 603

Query: 132 RAFCKWNGVKPDDKCVCEFVPGNG 61
           +AFCK N +  +D C+ EFV  NG
Sbjct: 604 QAFCKSNHLDENDCCIYEFVLENG 627


>emb|CAN82365.1| hypothetical protein VITISV_027616 [Vitis vinifera]
          Length = 844

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
 Frame = -2

Query: 405  SNEKANCS------LSSKRLDDEAIFDLGIVGRPKNPYFVTKLDPKRMSDLRIPKEVIRD 244
            ++E++NC+       S+ ++++   F++  +  P+NPYF TK+ P R S L +P +V+RD
Sbjct: 675  ASEESNCTKRKYKEASAVQVEENIAFEIESIVNPQNPYFETKVRPARRSKLYVPLDVLRD 734

Query: 243  FALRLPKLIDICDKDGRVWGAVVKKWHDGRHCITKGWRAFCKWNGVKPDDKCVCEFVPGN 64
              ++LP  + + D  GR+W   V  W DGR  I  GW+ FCKWN V  +D C+ EFV  +
Sbjct: 735  HNIKLPPKMTLRDPLGRLWIGKVAVWKDGRTWI--GWKPFCKWNNVGENDTCIXEFVQES 792

Query: 63   GESKFQLNVCIVRA 22
            G   + L V I+RA
Sbjct: 793  GHEGYLLVVHILRA 806



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/106 (41%), Positives = 61/106 (57%)
 Frame = -2

Query: 378 SSKRLDDEAIFDLGIVGRPKNPYFVTKLDPKRMSDLRIPKEVIRDFALRLPKLIDICDKD 199
           SS + +    F +  +   KNPYF TK+  KR S L +P ++++DF + LP  + + D  
Sbjct: 321 SSSQAEVYGAFVIENIVESKNPYFTTKVRLKR-SRLYVPADILQDFNIALPPRVLLRDLH 379

Query: 198 GRVWGAVVKKWHDGRHCITKGWRAFCKWNGVKPDDKCVCEFVPGNG 61
           GR W   V  W DGR  I  GW+AFCK N +  +D C+CEFV  NG
Sbjct: 380 GRSWPGDVSVWKDGRTWIG-GWQAFCKSNHLDENDCCICEFVLENG 424



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/54 (46%), Positives = 33/54 (61%)
 Frame = -2

Query: 267 IPKEVIRDFALRLPKLIDICDKDGRVWGAVVKKWHDGRHCITKGWRAFCKWNGV 106
           +P ++++D  + LP  + +CD  GR W   V  W DGR  I  GWRAFCKWN V
Sbjct: 17  VPVDILKDHNIALPPRVLLCDPHGRSWPGDVTIWKDGRTWI-GGWRAFCKWNHV 69


>emb|CAN76392.1| hypothetical protein VITISV_011465 [Vitis vinifera]
          Length = 765

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/107 (31%), Positives = 59/107 (55%)
 Frame = -2

Query: 324 PKNPYFVTKLDPKRMSDLRIPKEVIRDFALRLPKLIDICDKDGRVWGAVVKKWHDGRHCI 145
           PKNP+F+T +      +L IP+ V++   ++L   + + D+  R W   +    DGR  +
Sbjct: 655 PKNPHFITFIGRSSRYNLYIPQHVLKXNNIKLEGEMVMRDQKDRSWPMRLTTRKDGRLAL 714

Query: 144 TKGWRAFCKWNGVKPDDKCVCEFVPGNGESKFQLNVCIVRASTLSKD 4
            KGW  F K N +   D+CV EF+ G G    +++V ++RA  ++K+
Sbjct: 715 VKGWAKFWKENNLGRRDQCVFEFILGRGRISKEIHVQVIRAIKMTKN 761


>ref|XP_003631681.1| PREDICTED: uncharacterized protein LOC100853231 [Vitis vinifera]
          Length = 242

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = -2

Query: 303 TKLDPKRMSDLR---IPKEVIRDFALRLPKLIDICDKDGRVWGAVVKKWHDGRHCITKGW 133
           TK + K+ S  +   +P ++++DF + LP  + + D  GR W   V  W DGR  I  GW
Sbjct: 136 TKSNYKKASSSQAEYVPADILQDFNIALPPRVLLRDLHGRSWPGDVSVWKDGRTWI-GGW 194

Query: 132 RAFCKWNGVKPDDKCVCEFVPGNG 61
           +AFCK N +  +D C+ EFV  NG
Sbjct: 195 QAFCKSNHLDENDCCIYEFVLENG 218


>ref|NP_200822.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
           gi|238056754|sp|Q9FHB0.2|Y5014_ARATH RecName: Full=B3
           domain-containing protein At5g60140
           gi|225879140|dbj|BAH30640.1| hypothetical protein
           [Arabidopsis thaliana] gi|332009901|gb|AED97284.1|
           AP2/B3 domain-containing protein [Arabidopsis thaliana]
          Length = 328

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/98 (34%), Positives = 50/98 (51%)
 Frame = -2

Query: 321 KNPYFVTKLDPKRMSDLRIPKEVIRDFALRLPKLIDICDKDGRVWGAVVKKWHDGRHCIT 142
           +NPYF   L+PK+ S L IP  VIRD+ L  P+ I + D+ G +  A+  K         
Sbjct: 231 ENPYFTMTLNPKKKSQLHIPAHVIRDYDLTFPERITVVDEMGALEKAI--KIQKNGCIFV 288

Query: 141 KGWRAFCKWNGVKPDDKCVCEFVPGNGESKFQLNVCIV 28
           KG+ +F + N +K  DK +CE     G     + V I+
Sbjct: 289 KGFGSFIRRNKMKMTDKMICELKRTGGNLVHTIKVKII 326


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