BLASTX nr result

ID: Bupleurum21_contig00015976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015976
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159855.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    69   4e-10
ref|XP_004134468.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    69   4e-10
ref|XP_644032.1| hypothetical protein DDB_G0274557 [Dictyosteliu...    58   9e-07
ref|ZP_06965991.1| hypothetical protein Krac_10631 [Ktedonobacte...    57   2e-06
ref|XP_004159856.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    57   2e-06

>ref|XP_004159855.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Cucumis
            sativus]
          Length = 1127

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/103 (41%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
 Frame = +1

Query: 154  RGGMRDGNFGDRGSMRDXXXXXXXXXXXXXXXXXXXXXXXX------WDRNDRYGPPDRF 315
            RGGMRDG FG RG MRD                              W R DR GP +RF
Sbjct: 895  RGGMRDGGFGGRGGMRDGPGGRGGRGDFFSIRGRGRGFGGPPGGHVGWGRGDRGGPHNRF 954

Query: 316  NSIDSXXXXXXXXXXXFDNRRDTAGRSRERNYSPSPDRGVRTW 444
            N +D            FDNRRD + RSR R+YS SP+R VRTW
Sbjct: 955  NGVDGRGRGRGQGR--FDNRRDLSNRSRGRSYSRSPER-VRTW 994


>ref|XP_004134468.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Cucumis
            sativus]
          Length = 1125

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/103 (41%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
 Frame = +1

Query: 154  RGGMRDGNFGDRGSMRDXXXXXXXXXXXXXXXXXXXXXXXX------WDRNDRYGPPDRF 315
            RGGMRDG FG RG MRD                              W R DR GP +RF
Sbjct: 895  RGGMRDGGFGGRGGMRDGPGGRGGRGDFFSIRGRGRGFGGPPGGHVGWGRGDRGGPHNRF 954

Query: 316  NSIDSXXXXXXXXXXXFDNRRDTAGRSRERNYSPSPDRGVRTW 444
            N +D            FDNRRD + RSR R+YS SP+R VRTW
Sbjct: 955  NGVDGRGRGRGQGR--FDNRRDLSNRSRGRSYSRSPER-VRTW 994


>ref|XP_644032.1| hypothetical protein DDB_G0274557 [Dictyostelium discoideum AX4]
           gi|74865845|sp|Q8MP30.1|Y7791_DICDI RecName:
           Full=Uncharacterized histidine-rich protein
           DDB_G0274557; Flags: Precursor
           gi|21240652|gb|AAM44363.1| hypothetical protein
           [Dictyostelium discoideum] gi|60472218|gb|EAL70171.1|
           hypothetical protein DDB_G0274557 [Dictyostelium
           discoideum AX4]
          Length = 233

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/69 (36%), Positives = 30/69 (43%)
 Frame = -3

Query: 208 YHPSYCHDHQNFHPAFHRVHRNFHPAFHRGHQSPHLLFHHGHQIPHLSFHHVRGSPHPSF 29
           +HP + H H + HP  H  H + H   H  H   H   HH H   H   HH     H   
Sbjct: 98  HHPHH-HPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPH 156

Query: 28  HHDHQNPHP 2
           HH H +PHP
Sbjct: 157 HHPHPHPHP 165



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = -3

Query: 208 YHPSYCHDHQNFHPAFHRVHRNFHPAFHRGHQSPHLLFHHGHQIPHLSFHHVRGSPHPSF 29
           +HP + H H + H   H  H + H   H  H   H   HH H   H   HH    PHP  
Sbjct: 108 HHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPH--PHPHP 165

Query: 28  H---HDHQNPHP 2
           H   H H NPHP
Sbjct: 166 HPHPHLHPNPHP 177


>ref|ZP_06965991.1| hypothetical protein Krac_10631 [Ktedonobacter racemifer DSM 44963]
           gi|297555238|gb|EFH89102.1| hypothetical protein
           Krac_10631 [Ktedonobacter racemifer DSM 44963]
          Length = 139

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/64 (40%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
 Frame = +3

Query: 3   GWGF*WSW----WNEGWGLPRTW---WNERWGI*WPWWNKRWGLWWPRWNAGWKFR*TRW 161
           GWG  W W    W  GWG    W   W   WG  W W   R G W P W  GW +R   W
Sbjct: 75  GWGGGWGWRGGGWGPGWGGGWGWRSSWGPGWGGGWGW---RGGGWGPGWGGGWGWRGGGW 131

Query: 162 NAGW 173
             GW
Sbjct: 132 GGGW 135


>ref|XP_004159856.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            40-like [Cucumis sativus]
          Length = 1142

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/97 (41%), Positives = 44/97 (45%)
 Frame = +1

Query: 154  RGGMRDGNFGDRGSMRDXXXXXXXXXXXXXXXXXXXXXXXXWDRNDRYGPPDRFNSIDSX 333
            RGGMRDG  G RG   D                        W R DR  P DRFN +D  
Sbjct: 932  RGGMRDGP-GGRGGRGDFFSTRGRGRGFGGPLGGHVG----WGRGDRGPPHDRFNGVDGR 986

Query: 334  XXXXXXXXXXFDNRRDTAGRSRERNYSPSPDRGVRTW 444
                      FDNRRD + RSR R+YS SP+R VRTW
Sbjct: 987  GRGRGQGR--FDNRRDFSNRSRGRSYSRSPER-VRTW 1020


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