BLASTX nr result

ID: Bupleurum21_contig00015959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015959
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524654.1| conserved hypothetical protein [Ricinus comm...   278   1e-72
ref|XP_002305994.1| predicted protein [Populus trichocarpa] gi|2...   276   3e-72
ref|XP_002274197.1| PREDICTED: uncharacterized protein LOC100267...   247   2e-63
emb|CBI34908.3| unnamed protein product [Vitis vinifera]              214   2e-53
ref|XP_003618204.1| Serine/threonine protein kinase ATM [Medicag...   213   4e-53

>ref|XP_002524654.1| conserved hypothetical protein [Ricinus communis]
           gi|223536015|gb|EEF37673.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1072

 Score =  278 bits (711), Expect = 1e-72
 Identities = 140/275 (50%), Positives = 191/275 (69%), Gaps = 12/275 (4%)
 Frame = +3

Query: 6   EYRVGDFVWGKIKSYPWWPGQIYDASDASDYALKLKQKNRFLVAYFGDGSFSWCSPSQLK 185
           ++ VGDFVWGKI+S+PWWPG+IYD SDASD+A K+KQK++ LVAYFGDG+F+WC+PSQLK
Sbjct: 173 DFGVGDFVWGKIRSHPWWPGRIYDPSDASDFAKKVKQKDKILVAYFGDGTFAWCNPSQLK 232

Query: 186 PFVENYKVMSEQSNSKNFVYAIEAALDEVSTIVELEMTCSCLGEDGKPKAG--MACNSGI 359
           P  +N+  MS+QSNSKNFV A+E A+DEV  +V+L+MTC+C+ ++     G  +A N+G+
Sbjct: 233 PLDDNFVEMSKQSNSKNFVNAVEKAMDEVGRLVDLKMTCTCVPKENLIGFGRTLAVNAGV 292

Query: 360 KEGVLVPVEGVGKSFIAQCEPEKLIDSLRDFAETVSLKNMLELTVLKSWLTAYYRAKGGY 539
           KEG+L+P  G+ K   A  EP + + SLR  A+  ++ N+LE TVLK WL+A++ A GG+
Sbjct: 293 KEGLLLPEGGINKLSSALFEPTQFLSSLRSAAQVGTVTNILETTVLKRWLSAFHCANGGH 352

Query: 540 SLPSYYYPRTIEGLEDKSGN----------PVEVLVQGPDGEEWFPAPVIAVGSGLTPVN 689
            LPSYY P+ I GLED S N           +EV +QGP  E+W  +P            
Sbjct: 353 QLPSYYDPKPILGLEDDSRNWAVDLSNYSSGMEVRIQGPTEEDWLSSP-----RKNDQTT 407

Query: 690 QSLLQKCQETSADILYQRRKQKSVAELIEDEMKKE 794
            S+L+KCQ  S D LYQRRKQKS+AE++E +   E
Sbjct: 408 ASMLKKCQGVSEDGLYQRRKQKSLAEILEGQADAE 442


>ref|XP_002305994.1| predicted protein [Populus trichocarpa] gi|222848958|gb|EEE86505.1|
           predicted protein [Populus trichocarpa]
          Length = 1010

 Score =  276 bits (707), Expect = 3e-72
 Identities = 139/275 (50%), Positives = 190/275 (69%), Gaps = 12/275 (4%)
 Frame = +3

Query: 6   EYRVGDFVWGKIKSYPWWPGQIYDASDASDYALKLKQKNRFLVAYFGDGSFSWCSPSQLK 185
           ++RVGDFVWGKIKS+PWWPG++YD S+ASDYA K+KQ+++ LVAYFGD +F+WC+PSQL 
Sbjct: 114 QFRVGDFVWGKIKSHPWWPGRVYDPSNASDYAKKVKQRDKILVAYFGDSTFAWCNPSQLS 173

Query: 186 PFVENYKVMSEQSNSKNFVYAIEAALDEVSTIVELEMTCSCLGEDGKPKAG--MACNSGI 359
           PF EN+  M +QSNSK+FV A++ A+DEV  +V+L+MTC+C+ ++     G  +A N+GI
Sbjct: 174 PFEENFVEMFKQSNSKSFVNAVKEAVDEVGRLVDLKMTCACVPQENLIGFGRSLAVNTGI 233

Query: 360 KEGVLVPVEGVGKSFIAQCEPEKLIDSLRDFAETVSLKNMLELTVLKSWLTAYYRAKGGY 539
           KEG+LVP  G+ K   A  EP   +  L+D A+ VS  NMLE+TVLK+WL+A+YRAKGGY
Sbjct: 234 KEGLLVPEGGIEKFSTALFEPAAFLPVLKDVAQFVSTVNMLEVTVLKNWLSAFYRAKGGY 293

Query: 540 SLPSYYYPRTIEGLEDKSGN----------PVEVLVQGPDGEEWFPAPVIAVGSGLTPVN 689
            LP+Y+ P  I GL+D + N           VE  +QGP  E+W  +P        T   
Sbjct: 294 QLPTYHEPLPISGLDDDTRNWMMDLTDHSGGVEARIQGPVEEDWLSSPTSCKFGQTT--- 350

Query: 690 QSLLQKCQETSADILYQRRKQKSVAELIEDEMKKE 794
           Q  LQKCQ+ S D   +RRKQKS+AE++  ++  E
Sbjct: 351 QGPLQKCQDMSEDRWNRRRKQKSIAEILRGDIDAE 385


>ref|XP_002274197.1| PREDICTED: uncharacterized protein LOC100267992 [Vitis vinifera]
          Length = 976

 Score =  247 bits (630), Expect = 2e-63
 Identities = 130/269 (48%), Positives = 179/269 (66%), Gaps = 13/269 (4%)
 Frame = +3

Query: 6    EYRVGDFVWGKIKSYPWWPGQIYDASDASDYALKLKQKNRFLVAYFGDGSFSWCSPSQLK 185
            +Y VGDFVWGKIKS+PWWPGQIYD  DAS +A K  Q++R LVAYFGDG+F+WC PSQLK
Sbjct: 213  QYSVGDFVWGKIKSHPWWPGQIYDPKDASKHATKYSQRDRLLVAYFGDGTFAWCYPSQLK 272

Query: 186  PFVENYKVMSEQSNSKNFVYAIEAALDEVSTIVELEMTCSCLGEDGK--PKAGMACNSGI 359
            PF EN+  MS+QSNS++F+ A+E AL E+   VELEMTCSC  ++ +      +  N+G+
Sbjct: 273  PFEENFIEMSKQSNSRSFLKAVEEALAEIGRHVELEMTCSCTPKEIRIGLSRPLTVNAGV 332

Query: 360  KEGVLVPVEGVGKSFIAQCEPEKLIDSLRDFAETVSLKNMLELTVLKSWLTAYYRAKG-G 536
            KEG ++P  G+ K  +A  EP + +  L+   + VS+ +MLE +VLKS ++A++R+KG  
Sbjct: 333  KEGAVMPEGGIRKFSVAHFEPAEFLSGLKCIGQVVSVTSMLEFSVLKSQMSAFFRSKGPH 392

Query: 537  YSLPSYYYPRTIEGLEDKSGN----------PVEVLVQGPDGEEWFPAPVIAVGSGLTPV 686
            + L  Y+ P+ I GLE+K GN          PVEV +QGP  ++W   P   V       
Sbjct: 393  HQLAVYHEPQEIAGLEEKVGNGVTKTSDLGGPVEVPIQGPCEDDWLSMP---VSPSFGKT 449

Query: 687  NQSLLQKCQETSADILYQRRKQKSVAELI 773
            +++LL K    S D LYQRRKQKS+AE++
Sbjct: 450  SRTLLHKA-TGSEDKLYQRRKQKSMAEIM 477


>emb|CBI34908.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score =  214 bits (545), Expect = 2e-53
 Identities = 105/213 (49%), Positives = 148/213 (69%), Gaps = 3/213 (1%)
 Frame = +3

Query: 6   EYRVGDFVWGKIKSYPWWPGQIYDASDASDYALKLKQKNRFLVAYFGDGSFSWCSPSQLK 185
           +Y VGDFVWGKIKS+PWWPGQIYD  DAS +A K  Q++R LVAYFGDG+F+WC PSQLK
Sbjct: 7   QYSVGDFVWGKIKSHPWWPGQIYDPKDASKHATKYSQRDRLLVAYFGDGTFAWCYPSQLK 66

Query: 186 PFVENYKVMSEQSNSKNFVYAIEAALDEVSTIVELEMTCSCLGEDGK--PKAGMACNSGI 359
           PF EN+  MS+QSNS++F+ A+E AL E+   VELEMTCSC  ++ +      +  N+G+
Sbjct: 67  PFEENFIEMSKQSNSRSFLKAVEEALAEIGRHVELEMTCSCTPKEIRIGLSRPLTVNAGV 126

Query: 360 KEGVLVPVEGVGKSFIAQCEPEKLIDSLRDFAETVSLKNMLELTVLKSWLTAYYRAKG-G 536
           KEG ++P  G+ K  +A  EP + +  L+   + VS+ +MLE +VLKS ++A++R+KG  
Sbjct: 127 KEGAVMPEGGIRKFSVAHFEPAEFLSGLKCIGQVVSVTSMLEFSVLKSQMSAFFRSKGPH 186

Query: 537 YSLPSYYYPRTIEGLEDKSGNPVEVLVQGPDGE 635
           + L  Y+ P+ I GLE+K  +  E++    D E
Sbjct: 187 HQLAVYHEPQEIAGLEEKQKSMAEIMRGNGDVE 219


>ref|XP_003618204.1| Serine/threonine protein kinase ATM [Medicago truncatula]
           gi|355493219|gb|AES74422.1| Serine/threonine protein
           kinase ATM [Medicago truncatula]
          Length = 719

 Score =  213 bits (542), Expect = 4e-53
 Identities = 117/262 (44%), Positives = 164/262 (62%), Gaps = 5/262 (1%)
 Frame = +3

Query: 3   CEYRVGDFVWGKIKSYPWWPGQIYDASDASDYALKLKQKNRFLVAYFGDGSFSWCSPSQL 182
           C++ VGDFVWGKIKS+ WWPG++YD SDA + ALKLKQKNR LVAYF DG+F+WC PSQL
Sbjct: 201 CDFSVGDFVWGKIKSHLWWPGRVYDPSDAPELALKLKQKNRLLVAYF-DGTFAWCHPSQL 259

Query: 183 KPFVENYKVMSEQSNSKNFVYAIEAALDEVSTIV--ELEMTCSCLGEDGKPKAGM-ACNS 353
           KPF +N+  M  Q +SK F Y ++ A++EV  ++  +L  + + +GE     A M A NS
Sbjct: 260 KPFKDNFDNMVRQGSSKPFTYVVQEAVNEVGRVLVTKLSRSFAVVGETKSEFAPMLAKNS 319

Query: 354 GIKEGVLVPVEGVGKSFIAQCEPEKLIDSLRDFAETVSLKNMLELTVLKSWLTAYYRAKG 533
           GIKEGV VP  G+        EP +L+  ++  AE + + ++LEL +LK+ L+A+Y +KG
Sbjct: 320 GIKEGVFVPDSGIENILAVTLEPAELLSQVKQIAEVIDIASVLELEILKARLSAFYLSKG 379

Query: 534 GYSLPSYYYPRTIEGLE--DKSGNPVEVLVQGPDGEEWFPAPVIAVGSGLTPVNQSLLQK 707
           GY LP Y +P+ + GLE  D   + VE   QGP  E++   P       LTP        
Sbjct: 380 GYKLPCYEHPKRVLGLEDIDDFNDAVEAPSQGPFEEDYSTLP-------LTP-------- 424

Query: 708 CQETSADILYQRRKQKSVAELI 773
            + +S      RRKQKS+A+++
Sbjct: 425 -KSSSGSRPNGRRKQKSIADIM 445


Top