BLASTX nr result

ID: Bupleurum21_contig00015955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015955
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81147.1| hypothetical protein VITISV_020812 [Vitis vinifera]   338   6e-98
ref|XP_003631965.1| PREDICTED: uncharacterized protein LOC100853...   337   1e-97
ref|XP_002519332.1| conserved hypothetical protein [Ricinus comm...   316   1e-90
ref|XP_002884616.1| PDE320 [Arabidopsis lyrata subsp. lyrata] gi...   309   1e-86
ref|NP_566296.1| protein pigment defective 320 [Arabidopsis thal...   305   1e-85

>emb|CAN81147.1| hypothetical protein VITISV_020812 [Vitis vinifera]
          Length = 1050

 Score =  338 bits (866), Expect(2) = 6e-98
 Identities = 170/270 (62%), Positives = 204/270 (75%)
 Frame = +3

Query: 60   RMNKLRWAMEGGFWDVDLSTPVTIDGLARPVPGDPTIPLGLSRGTRLSRPKQIDFFQKFM 239
            +M KLRWAM+GGFW++D+ST  T+DG+AR VP DP +PLGLSRGTRLSRP QIDFFQ+FM
Sbjct: 585  KMKKLRWAMDGGFWELDISTATTLDGVARAVPDDP-LPLGLSRGTRLSRPMQIDFFQRFM 643

Query: 240  YMPFVPSFAGGSSGTGGLFLQRVLAFPFGENWFATLLGQFNVQKFVSSVKKDQLDQSSGT 419
             MPFVPS    S  T G  LQR   FPF ENWFA+LLGQFN QKFVSSVK+ +L Q S +
Sbjct: 644  SMPFVPS---SSISTHGFSLQRGFTFPFTENWFASLLGQFNFQKFVSSVKEGRLLQPSES 700

Query: 420  SLLDTMGKHLRNKSFYTLDFCSEMEITPDDTLMVSVEANVQDKVPRQKAVFHHQFPHHDL 599
            S L  +G+   +KS Y L   SE+ ITPDDTL+VS+EA    KVPR+KAVF H+FP+H+L
Sbjct: 701  SWLQGIGRRFSDKSLYALGLSSELLITPDDTLLVSLEAYGDKKVPRKKAVFLHKFPNHNL 760

Query: 600  TLEAASPGLFVDQQGTYWDEPLTMALDLASVASDAGPSYHICINQNVGEPKIFDGQPNST 779
             +EA  PGLFVD+ GTYWD PL+MA+DLASVASD+G SYH+ ++ N G PK FDG     
Sbjct: 761  MVEAVWPGLFVDKFGTYWDVPLSMAIDLASVASDSGASYHLSVHHNTGTPKQFDGNQTHE 820

Query: 780  ASANILPGLYAKSAFSYKKNIDIWRSKAPK 869
              A +LPGL AK AF+ KKNID+WRSKA K
Sbjct: 821  VPATLLPGLCAKGAFALKKNIDLWRSKAQK 850



 Score = 47.0 bits (110), Expect(2) = 6e-98
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +2

Query: 863 SKKLKMVQPYDAFLSNPHISLSGILG 940
           ++KLKMVQP+D FLSNPHIS SGI+G
Sbjct: 848 AQKLKMVQPFDIFLSNPHISFSGIIG 873


>ref|XP_003631965.1| PREDICTED: uncharacterized protein LOC100853208 [Vitis vinifera]
           gi|297736817|emb|CBI26018.3| unnamed protein product
           [Vitis vinifera]
          Length = 465

 Score =  337 bits (864), Expect(2) = 1e-97
 Identities = 170/269 (63%), Positives = 203/269 (75%)
 Frame = +3

Query: 63  MNKLRWAMEGGFWDVDLSTPVTIDGLARPVPGDPTIPLGLSRGTRLSRPKQIDFFQKFMY 242
           M KLRWAM+GGFW++D+ST  T+DG+AR VP DP +PLGLSRGTRLSRP QIDFFQ+FM 
Sbjct: 1   MKKLRWAMDGGFWELDMSTATTLDGVARAVPDDP-LPLGLSRGTRLSRPMQIDFFQRFMS 59

Query: 243 MPFVPSFAGGSSGTGGLFLQRVLAFPFGENWFATLLGQFNVQKFVSSVKKDQLDQSSGTS 422
           MPFVPS    S  T G  LQR   FPF ENWFA+LLGQFN QKFVSSVK+ +L Q S +S
Sbjct: 60  MPFVPS---SSISTHGFSLQRGFTFPFTENWFASLLGQFNFQKFVSSVKEGRLLQPSESS 116

Query: 423 LLDTMGKHLRNKSFYTLDFCSEMEITPDDTLMVSVEANVQDKVPRQKAVFHHQFPHHDLT 602
            L  +G+   +KS Y L   SE+ ITPDDTL+VS+EA    KVPR+KAVF H+FP+H+L 
Sbjct: 117 WLQGIGRRFSDKSLYALGLSSELLITPDDTLLVSLEAYGDKKVPRKKAVFLHKFPNHNLM 176

Query: 603 LEAASPGLFVDQQGTYWDEPLTMALDLASVASDAGPSYHICINQNVGEPKIFDGQPNSTA 782
           +EA  PGLFVD+ GTYWD PL+MA+DLASVASD+G SYH+ ++ N G PK FDG      
Sbjct: 177 VEAVWPGLFVDKFGTYWDVPLSMAIDLASVASDSGASYHLSVHHNTGTPKQFDGNQTHEV 236

Query: 783 SANILPGLYAKSAFSYKKNIDIWRSKAPK 869
            A +LPGL AK AF+ KKNID+WRSKA K
Sbjct: 237 PATLLPGLCAKGAFALKKNIDLWRSKAQK 265



 Score = 47.0 bits (110), Expect(2) = 1e-97
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +2

Query: 863 SKKLKMVQPYDAFLSNPHISLSGILG 940
           ++KLKMVQP+D FLSNPHIS SGI+G
Sbjct: 263 AQKLKMVQPFDIFLSNPHISFSGIIG 288


>ref|XP_002519332.1| conserved hypothetical protein [Ricinus communis]
           gi|223541647|gb|EEF43196.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 466

 Score =  316 bits (809), Expect(2) = 1e-90
 Identities = 157/271 (57%), Positives = 197/271 (72%), Gaps = 2/271 (0%)
 Frame = +3

Query: 63  MNKLRWAMEGGFWDVDLSTPVTIDGLARPVPGDPTIPLGLSRGTRLSRPKQIDFFQKFMY 242
           M KL WAM+GGFWDVD+STPVT++G+ARPVPGDP +PLG+SRGT+LSRPKQ+ FFQ+FM 
Sbjct: 1   MKKLGWAMDGGFWDVDVSTPVTLEGVARPVPGDP-LPLGISRGTKLSRPKQLHFFQRFMS 59

Query: 243 MPFVPSFAGGSSGTGGLFLQRVLAFP-FGENWFATLLGQFNVQKFVSSVKKDQLDQSSGT 419
            PF+PSF+    G G   LQ VLAFP F +NWF TLLGQFN QKFVS   +      S +
Sbjct: 60  SPFIPSFSSHRHGHG-FSLQSVLAFPTFSQNWFGTLLGQFNFQKFVS---ESGASLRSSS 115

Query: 420 SLLDTMGKHLRNKSFYTLDFCSEMEITPDDTLMVSVEANVQ-DKVPRQKAVFHHQFPHHD 596
           S L+T+G+ L + S Y L F SE+  TPDDTL+ +   +    +  R+KAV HH+FP+H+
Sbjct: 116 SSLNTIGRQLCDASLYALGFSSELSFTPDDTLLFNFNTHGDATRNSRKKAVLHHKFPNHN 175

Query: 597 LTLEAASPGLFVDQQGTYWDEPLTMALDLASVASDAGPSYHICINQNVGEPKIFDGQPNS 776
           LTLEA SP LF+D    YWD P +MA+DLAS+ SD+GPSYH C++ N G+PK+F G    
Sbjct: 176 LTLEAVSPALFIDSSDNYWDVPFSMAIDLASLPSDSGPSYHFCMHHNAGDPKLFGGGHTL 235

Query: 777 TASANILPGLYAKSAFSYKKNIDIWRSKAPK 869
              A +LPG   KSAF++KKNIDIWRSKAPK
Sbjct: 236 AVPAPLLPGFSFKSAFAFKKNIDIWRSKAPK 266



 Score = 44.7 bits (104), Expect(2) = 1e-90
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 869 KLKMVQPYDAFLSNPHISLSGILG 940
           KLKMVQP+D F+SNPHIS SGI+G
Sbjct: 266 KLKMVQPFDLFISNPHISASGIVG 289


>ref|XP_002884616.1| PDE320 [Arabidopsis lyrata subsp. lyrata]
           gi|297330456|gb|EFH60875.1| PDE320 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 479

 Score =  309 bits (791), Expect(2) = 1e-86
 Identities = 149/280 (53%), Positives = 197/280 (70%), Gaps = 11/280 (3%)
 Frame = +3

Query: 63  MNKLRWAMEGGFWDVDLSTPVTIDGLARPVPGDPTIPLGLSRGTRLSRPKQIDFFQKFMY 242
           MN+LRW  EG  WD+D+STP T++G+AR VP DP +PLGLSRGTRLSRPKQ++FF +FM 
Sbjct: 1   MNRLRWVEEGDIWDLDMSTPATLEGIARAVPDDP-LPLGLSRGTRLSRPKQVEFFHRFMT 59

Query: 243 MPFVPSFAG-----GSSGTGGLFLQRVLAFPFGENWFATLLGQFNVQKFVSSVKKDQL-- 401
            P +PSF+      G  G GG  LQRVL  PF  NW  +LLGQF+VQ+FVS ++K +   
Sbjct: 60  SPLIPSFSPIRPNTGDGGCGGFSLQRVLTLPFSNNWLVSLLGQFDVQRFVSEIEKTKTFG 119

Query: 402 --DQSSGTSLLDTMGKHLRNKSFYTLDFCSEMEITPDDTLMVSVEANVQD--KVPRQKAV 569
               S+  S L+T+GKHL++KS Y L FCSE  ++PDDTL++S +    D  K PR KA+
Sbjct: 120 RGSSSTVASRLNTIGKHLKDKSLYALGFCSEFLLSPDDTLLLSYDTYKGDLEKNPRAKAI 179

Query: 570 FHHQFPHHDLTLEAASPGLFVDQQGTYWDEPLTMALDLASVASDAGPSYHICINQNVGEP 749
           F+H+FP H+LT EAA PGLFVD+ G YWD PL+MA+DLAS+ +++GPSYH+C++ N G P
Sbjct: 180 FNHEFPLHNLTAEAAWPGLFVDKHGEYWDVPLSMAIDLASLPAESGPSYHVCLHHNSGAP 239

Query: 750 KIFDGQPNSTASANILPGLYAKSAFSYKKNIDIWRSKAPK 869
           K  +         ++LPGL  KSA SY+ N+D+WR   PK
Sbjct: 240 KKLNSDTMEVPPPSLLPGLSLKSAVSYRTNMDLWRGTTPK 279



 Score = 38.1 bits (87), Expect(2) = 1e-86
 Identities = 14/27 (51%), Positives = 23/27 (85%)
 Frame = +2

Query: 860 SSKKLKMVQPYDAFLSNPHISLSGILG 940
           ++ KL+  +PYD FLS+PH+++SGI+G
Sbjct: 276 TTPKLETCKPYDVFLSSPHVAVSGIIG 302


>ref|NP_566296.1| protein pigment defective 320 [Arabidopsis thaliana]
           gi|6729003|gb|AAF27000.1|AC016827_11 hypothetical
           protein [Arabidopsis thaliana]
           gi|14194139|gb|AAK56264.1|AF367275_1 AT3g06960/F17A9_11
           [Arabidopsis thaliana] gi|16323342|gb|AAL15384.1|
           AT3g06960/F17A9_11 [Arabidopsis thaliana]
           gi|332640959|gb|AEE74480.1| protein pigment defective
           320 [Arabidopsis thaliana]
          Length = 479

 Score =  305 bits (782), Expect(2) = 1e-85
 Identities = 148/280 (52%), Positives = 195/280 (69%), Gaps = 11/280 (3%)
 Frame = +3

Query: 63  MNKLRWAMEGGFWDVDLSTPVTIDGLARPVPGDPTIPLGLSRGTRLSRPKQIDFFQKFMY 242
           MN++RW  EG  WD+D+STPVT++G AR VP DP +PLGLSRGTRLSRPKQ++FF +FM 
Sbjct: 1   MNRMRWVGEGDIWDLDMSTPVTLEGTARAVPDDP-LPLGLSRGTRLSRPKQVEFFHRFMA 59

Query: 243 MPFVPSFAG-----GSSGTGGLFLQRVLAFPFGENWFATLLGQFNVQKFVSSVKKDQL-- 401
            P +PSF+      G  G GG  LQRVL  PF  NW  +LLGQF+VQ+FV+ + K +   
Sbjct: 60  SPLIPSFSPIRPNTGDGGGGGFSLQRVLTLPFSNNWLVSLLGQFDVQRFVTEIDKTKAFG 119

Query: 402 --DQSSGTSLLDTMGKHLRNKSFYTLDFCSEMEITPDDTLMVSVEA--NVQDKVPRQKAV 569
               S+  S L+T+GKHL++KS Y L FCSE  ++PDDTL++S +A     DK PR KA+
Sbjct: 120 RGSSSTVASRLNTIGKHLKDKSLYALGFCSEFLLSPDDTLLLSYDAYKGDLDKNPRAKAI 179

Query: 570 FHHQFPHHDLTLEAASPGLFVDQQGTYWDEPLTMALDLASVASDAGPSYHICINQNVGEP 749
           F+H+FP H+LT EA  PGLFVD+ G YWD PL+MA+DLAS+ +++GPSYH+C++ N G P
Sbjct: 180 FNHEFPLHNLTAEAVWPGLFVDKHGEYWDVPLSMAIDLASLPAESGPSYHLCLHHNSGSP 239

Query: 750 KIFDGQPNSTASANILPGLYAKSAFSYKKNIDIWRSKAPK 869
           K            ++LPGL  KSA SY+ N+D+WR   PK
Sbjct: 240 KKLHSDTMEVPPPSLLPGLSLKSAVSYRTNMDLWRGTTPK 279



 Score = 38.1 bits (87), Expect(2) = 1e-85
 Identities = 14/27 (51%), Positives = 23/27 (85%)
 Frame = +2

Query: 860 SSKKLKMVQPYDAFLSNPHISLSGILG 940
           ++ KL+  +PYD FLS+PH+++SGI+G
Sbjct: 276 TTPKLETCKPYDVFLSSPHVAVSGIIG 302


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