BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015940
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   194   8e-62
emb|CBI35741.3| unnamed protein product [Vitis vinifera]              194   1e-61
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu...   167   1e-52
ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi...   163   1e-50
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ...   161   3e-50

>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  194 bits (494), Expect(2) = 8e-62
 Identities = 94/140 (67%), Positives = 112/140 (80%)
 Frame = +2

Query: 2   ELFEDIKKNNFGSKTCISEHSSSLNPDSYTYSAMLEASAAAHQWEYFEIVYKEMVLSGFQ 181
           ELFE+ K++ F S TC+ + S SL PD YTYS+MLEASA+AHQWE+FE VYKEM LSG+Q
Sbjct: 133 ELFEETKRSTFASNTCMDDGSISLVPDLYTYSSMLEASASAHQWEFFEYVYKEMTLSGYQ 192

Query: 182 LDQRRHAHLLVKASRNGKCDVLEHAFDTILEAGEIPHVSFFTEMVCQATAKRDYVRAVAI 361
           LDQ +HA LL KASR GK  +LEHAFDTILEAGEIPH S FTEM+CQATA+ +Y RAV +
Sbjct: 193 LDQSKHALLLGKASRAGKWHLLEHAFDTILEAGEIPHPSIFTEMICQATAQHNYERAVTL 252

Query: 362 VNTVGYAPFQVSETQWMRLF 421
           +N + +APF VSE QW  LF
Sbjct: 253 INAMAHAPFVVSEKQWTDLF 272



 Score = 70.1 bits (170), Expect(2) = 8e-62
 Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
 Frame = +1

Query: 442  DRINEDILKELFDSLCNRELTEEVSVSNLIRVLQSLCGTTSTSCNSNFINPGEEIIGESL 621
            DRI+   L++L DSL N ++ EE +VSNL + LQSLCG+ ++   S+     E +I   L
Sbjct: 276  DRISRVNLEKLLDSLHNCDVAEEATVSNLYKSLQSLCGSGTSMDQSSVAFGDEAMIRTPL 335

Query: 622  SEAYSNISEVDANVEL-----PADA--TTLNSCDDFQFNNDEVSND-----KPRNDREDS 765
            +    N  E+D N ++      ADA  + L+  ++    N +V+ D       R++ ED 
Sbjct: 336  N---GNSGELDDNKKVFFQKFSADARGSDLSPHENPPVKNSDVTFDIFSVNLTRSEEEDD 392

Query: 766  AYPEDGMARHTSMDGLSSDFAFKESVDTLLDNNYEGNEL-GESDLFQMLDDDMPATEVGA 942
                      T  + +S  F +  + D +  N  E N L G S+    ++ +M A E   
Sbjct: 393  ---------DTDGEAISEAFNYACNGDEVASN--EPNTLDGNSEGINKIELNMRAKE-DD 440

Query: 943  SQRSDVPSAHEILEKWKESRKKD 1011
            S  S++PSA+EILE WK+SR++D
Sbjct: 441  SHGSNLPSANEILETWKKSRERD 463


>emb|CBI35741.3| unnamed protein product [Vitis vinifera]
          Length = 437

 Score =  194 bits (494), Expect(2) = 1e-61
 Identities = 94/140 (67%), Positives = 112/140 (80%)
 Frame = +2

Query: 2   ELFEDIKKNNFGSKTCISEHSSSLNPDSYTYSAMLEASAAAHQWEYFEIVYKEMVLSGFQ 181
           ELFE+ K++ F S TC+ + S SL PD YTYS+MLEASA+AHQWE+FE VYKEM LSG+Q
Sbjct: 30  ELFEETKRSTFASNTCMDDGSISLVPDLYTYSSMLEASASAHQWEFFEYVYKEMTLSGYQ 89

Query: 182 LDQRRHAHLLVKASRNGKCDVLEHAFDTILEAGEIPHVSFFTEMVCQATAKRDYVRAVAI 361
           LDQ +HA LL KASR GK  +LEHAFDTILEAGEIPH S FTEM+CQATA+ +Y RAV +
Sbjct: 90  LDQSKHALLLGKASRAGKWHLLEHAFDTILEAGEIPHPSIFTEMICQATAQHNYERAVTL 149

Query: 362 VNTVGYAPFQVSETQWMRLF 421
           +N + +APF VSE QW  LF
Sbjct: 150 INAMAHAPFVVSEKQWTDLF 169



 Score = 69.3 bits (168), Expect(2) = 1e-61
 Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
 Frame = +1

Query: 442  DRINEDILKELFDSLCNRELTEEVSVSNLIRVLQSLCGTTSTSCNSNFINPGEEIIGESL 621
            DRI+   L++L DSL N ++ EE +VSNL + LQSLCG+ ++   S+     E +I   L
Sbjct: 173  DRISRVNLEKLLDSLHNCDVAEEATVSNLYKSLQSLCGSGTSMDQSSVAFGDEAMIRTPL 232

Query: 622  SEAYSNISEVDANVEL-----PADA--TTLNSCDDFQFNNDEVSND-----KPRNDREDS 765
            +    N  E+D N ++      ADA  + L+  ++    N +V+ D       R++ ED 
Sbjct: 233  N---GNSGELDDNKKVFFQKFSADARGSDLSPHENPPVKNSDVTFDIFSVNLTRSEEEDD 289

Query: 766  AYPEDGMARHTSMDGLSSDFAFKESVDTLLDNNYEGNEL-GESDLFQMLDDDMPATEVGA 942
                      T  + +S  F +  + D +  N  E N L G S+    ++ +M A E   
Sbjct: 290  ---------DTDGETISEAFNYACNGDEVASN--EPNTLDGNSEGINKIELNMRAKE-DD 337

Query: 943  SQRSDVPSAHEILEKWKESRKKD 1011
            S  S++PSA+EILE WK+SR++D
Sbjct: 338  SHGSNLPSANEILETWKKSRERD 360


>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
            gi|223535436|gb|EEF37106.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 1010

 Score =  167 bits (424), Expect(2) = 1e-52
 Identities = 85/149 (57%), Positives = 108/149 (72%)
 Frame = +2

Query: 2    ELFEDIKKNNFGSKTCISEHSSSLNPDSYTYSAMLEASAAAHQWEYFEIVYKEMVLSGFQ 181
            ELF +IK  N           + L PD +TYS+MLEASA+A QWEYFE+VYKEM   G+Q
Sbjct: 667  ELFGEIKGTN--------NDGTYLVPDEFTYSSMLEASASALQWEYFELVYKEMTFCGYQ 718

Query: 182  LDQRRHAHLLVKASRNGKCDVLEHAFDTILEAGEIPHVSFFTEMVCQATAKRDYVRAVAI 361
            LDQ++HA LLV+ASR GK  +LEHAFD  LEAGEIPH   FTEMV QATA+++Y RAV +
Sbjct: 719  LDQKKHASLLVEASRVGKYHLLEHAFDAALEAGEIPHHLLFTEMVFQATAQQNYERAVVL 778

Query: 362  VNTVGYAPFQVSETQWMRLFEDNAELLIE 448
            VNT+  APF++SE QW+ LF+ N + + +
Sbjct: 779  VNTLALAPFKISEKQWIDLFQKNGDKITQ 807



 Score = 66.6 bits (161), Expect(2) = 1e-52
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
 Frame = +1

Query: 442  DRINEDILKELFDSLCNRELTEEVSVSNLIRVLQSLCGTTSTSCNSNFINPGEEIIGESL 621
            D+I +D L++L D+L + ++  E +V+NL R L SLCG   +   S   + G ++   S 
Sbjct: 803  DKITQDGLEKLLDALRSSDVASEPTVANLSRTLHSLCGRGRSEYLSGSTSLGIDVTNSSY 862

Query: 622  SEAYSNISEVDANVELPADATTLNSCDDFQFNNDEVSNDKPRNDREDSAYPEDGMARH-- 795
             ++ S     D   E+  D  TL    D  + +  V+      +  D         R+  
Sbjct: 863  LDSGSRKIMGDKGPEMHED--TLIDKTDIAYGDLSVTRSNTGGEGSDDTDEASSSPRNYS 920

Query: 796  TSMDGLSSDFAFKESVDTLLDNNYEGNELGESDLFQMLDDDMPATEVGASQRSDVPSAHE 975
            T  DG++S      +V    D+   G      D F  ++  +P  +V  S  + +PSA E
Sbjct: 921  TDRDGIAS---ICTNVKIFGDDEASGASTDCLD-FDEMEYGIPINQVDDSCGTKLPSADE 976

Query: 976  ILEKWKESRKKDGILFSFQL 1035
            IL+ WKESR K  + F FQL
Sbjct: 977  ILDIWKESR-KGRLFFPFQL 995


>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
           chloroplastic-like [Glycine max]
          Length = 865

 Score =  163 bits (413), Expect(2) = 1e-50
 Identities = 81/144 (56%), Positives = 105/144 (72%)
 Frame = +2

Query: 5   LFEDIKKNNFGSKTCISEHSSSLNPDSYTYSAMLEASAAAHQWEYFEIVYKEMVLSGFQL 184
           LFE++K              SS+ PD Y+Y++MLEASA A QWEYFE VY+EM++SG+QL
Sbjct: 521 LFEEVKVAKSEFYATPEGGYSSVVPDVYSYNSMLEASATAQQWEYFEHVYREMIVSGYQL 580

Query: 185 DQRRHAHLLVKASRNGKCDVLEHAFDTILEAGEIPHVSFFTEMVCQATAKRDYVRAVAIV 364
           DQ +H  LLVKASR GK  +LEHAFD ILEAGEIPH  FF E+V QA A+ +Y RAV ++
Sbjct: 581 DQDKHLSLLVKASRAGKLHLLEHAFDMILEAGEIPHHLFFFELVIQAIAQHNYERAVILI 640

Query: 365 NTVGYAPFQVSETQWMRLFEDNAE 436
           NT+ YAPF+V+E QW  LF+++ +
Sbjct: 641 NTMAYAPFRVTEKQWTNLFKESED 664



 Score = 63.9 bits (154), Expect(2) = 1e-50
 Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
 Frame = +1

Query: 442  DRINEDILKELFDSLCNRELTEEVSVSNLIRVLQSLCGTTSTSCNSNFINPGEEIIGESL 621
            DRI+ + L+ L D+L N ++  E++VSNL R L  LCG  ++   S+ I  G E     L
Sbjct: 664  DRISLENLERLLDALGNCDIVSELTVSNLTRSLHVLCGLGTSRNFSSIIPFGSENSVNGL 723

Query: 622  SEAYSNISEVD--------ANVELPAD---ATTLNSCDDFQFNNDEVS---NDKPRNDRE 759
            +E   +   V           VE   D   A+     +   F+ D+V+   N      R 
Sbjct: 724  NEGIDDDGNVPKISRRMMIEGVESKNDILVASYHTEPETIAFSRDQVNGGDNSDVMVFRP 783

Query: 760  DSAYPEDGMARHTSMDGLSSDFAFKESVDTLLDNNYEGNELGESDLFQMLDDDMPATEVG 939
             ++Y EDG + +      + + A  +S D L +  ++    G S+     DDD       
Sbjct: 784  QNSYIEDGKSLYADSLECTDNLALDKSSDELDEELWDD---GSSE-----DDDGEGV--- 832

Query: 940  ASQRSDVPSAHEILEKWKESRKKDGIL 1020
                 D PSA+EILE WKE R++DG L
Sbjct: 833  ----IDKPSAYEILEVWKEMREEDGNL 855


>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355509586|gb|AES90728.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 877

 Score =  161 bits (407), Expect(2) = 3e-50
 Identities = 74/124 (59%), Positives = 97/124 (78%)
 Frame = +2

Query: 65  SSLNPDSYTYSAMLEASAAAHQWEYFEIVYKEMVLSGFQLDQRRHAHLLVKASRNGKCDV 244
           S L PD+YTY+ MLEAS+  HQWEYFE VYKEM+LSG+ LDQ +H  LLVKASR GK  +
Sbjct: 552 SDLRPDAYTYNLMLEASSRGHQWEYFEHVYKEMILSGYHLDQNKHLPLLVKASRAGKLHL 611

Query: 245 LEHAFDTILEAGEIPHVSFFTEMVCQATAKRDYVRAVAIVNTVGYAPFQVSETQWMRLFE 424
           LEHAFD +LEAGEIPH  FF E+V QA A+ +Y RA+ +++T+ +AP++V+E QW  LF+
Sbjct: 612 LEHAFDMVLEAGEIPHHLFFFELVIQAIAQHNYERAIILLSTMAHAPYRVTEKQWTELFK 671

Query: 425 DNAE 436
           +N +
Sbjct: 672 ENED 675



 Score = 65.1 bits (157), Expect(2) = 3e-50
 Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
 Frame = +1

Query: 442  DRINEDILKELFDSLCNRELTEEVSVSNLIRVLQSLCGTTST--------------SCNS 579
            DRIN + LK L D L N  +  E ++SNL R L  LCG  S+               C +
Sbjct: 675  DRINHENLKRLLDDLGNCNVVSEATISNLSRSLHDLCGLGSSRNISSIIPFRSENVDCLN 734

Query: 580  NFINPGE-----EIIGESLSE-AYSNISEVDANVELPADATTLNSCDDFQFNNDEVSNDK 741
              IN GE        G  + E A S    +    +   D  T N     + NN++V   +
Sbjct: 735  ETINGGENGKAPNFSGRMMIEGAESGNDILFGGDQAEPDMFTFNDDQVDRVNNNDVVVCR 794

Query: 742  PRND--REDSAYPEDGMARHTSMDGLSSDFAFKESVDTLLDN-NYEGNELGESDLFQMLD 912
            P+N    + S++  D   R   +D L+ D +  +S D L D+ +YE ++ G+ ++     
Sbjct: 795  PQNRVIEDKSSFCVD---RPEFLDRLTLDKSSDDSEDELSDDESYEDDDDGDKEVI---- 847

Query: 913  DDMPATEVGASQRSDVPSAHEILEKWKESRKKDGILFSFQL 1035
                          D PSA++ILE WKE R++D  L   ++
Sbjct: 848  --------------DKPSAYQILEAWKEMREEDKSLLHSEI 874