BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015911
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   266   2e-95
ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2...   272   5e-95
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   266   5e-94
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              257   6e-93
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [...   257   2e-90

>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis
           vinifera] gi|359491114|ref|XP_002280549.2| PREDICTED:
           RNA pseudourine synthase 7-like isoform 1 [Vitis
           vinifera]
          Length = 386

 Score =  266 bits (679), Expect(2) = 2e-95
 Identities = 133/209 (63%), Positives = 155/209 (74%), Gaps = 4/209 (1%)
 Frame = +1

Query: 238 ARTASKADFFRQQIESGVVEKKYIAKVRGVFPEDEKIVNANVHFNAREGNSTVEVAENCG 417
           AR+ASKAD FRQQIE+G+V+K+YIAKV GVFP+DE++VN NV++NAREG STVEV   CG
Sbjct: 177 ARSASKADSFRQQIEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCG 236

Query: 418 NGVTALKGKVACTKFNRISTDGKHSIVSCQPFTGRTHQIRVHLQYIGYPIANDTMYLSES 597
           N  T LKGK ACTKF RIST+G HSIV C+P TGRTHQIRVHLQY G+PIAND +YLSE 
Sbjct: 237 N--TPLKGKSACTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEF 294

Query: 598 VDTGSTKGI---RSTRESRLFSKSNSDGESGDA-SGKGSKNNFDIDPMCTNCPDLAPKGY 765
               STKG+   R+   S     S+S     D      S  +F IDPMCTNCP+L PKGY
Sbjct: 295 SVDRSTKGLSADRAAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGY 354

Query: 766 DGYEEGLWLHCVQYTGPGWAYECPLPDWA 852
           D  EEGLWLHC++Y GP W YECP P+WA
Sbjct: 355 DEDEEGLWLHCIRYCGPDWVYECPHPEWA 383



 Score =  110 bits (276), Expect(2) = 2e-95
 Identities = 51/56 (91%), Positives = 54/56 (96%)
 Frame = +2

Query: 2   ILQKEPDVLTVSKPASVPVHPCGQYRKNTIVGILQAEHDLAPLFPIHRLDRLVSGL 169
           +LQKEPDVLT+ KPASVPVHPCGQYRKNT+VGILQAEH LAPLFPIHRLDRLVSGL
Sbjct: 118 VLQKEPDVLTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGL 173


>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  272 bits (696), Expect(2) = 5e-95
 Identities = 127/209 (60%), Positives = 161/209 (77%), Gaps = 3/209 (1%)
 Frame = +1

Query: 238 ARTASKADFFRQQIESGVVEKKYIAKVRGVFPEDEKIVNANVHFNAREGNSTVEVAENCG 417
           AR A++AD FRQ+IE+G V+K+Y+AKV GVFPEDE+IV+ NV++NAREG STVEV  +C 
Sbjct: 182 ARNATRADLFRQEIEAGKVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSCD 241

Query: 418 NGVTALKGKVACTKFNRISTDGKHSIVSCQPFTGRTHQIRVHLQYIGYPIANDTMYLSES 597
              + +KGK ACTKF RI T+G HSIV C+P TGRTHQIRVHLQY G+PIAND +YLSE+
Sbjct: 242 G--SPIKGKTACTKFTRIGTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSEN 299

Query: 598 VDTGSTKGIRSTRESRLFSKSNS---DGESGDASGKGSKNNFDIDPMCTNCPDLAPKGYD 768
           V   S++G+ + R +   S +N    +  S D     ++ +FDIDPMCTNCP+L PKGYD
Sbjct: 300 VTNRSSEGVNADRAAH--SPNNCLVPENNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGYD 357

Query: 769 GYEEGLWLHCVQYTGPGWAYECPLPDWAI 855
           G+EEGLWLHCVQY+G GW Y+CP PDWA+
Sbjct: 358 GHEEGLWLHCVQYSGSGWVYQCPYPDWAV 386



 Score =  102 bits (255), Expect(2) = 5e-95
 Identities = 47/56 (83%), Positives = 52/56 (92%)
 Frame = +2

Query: 2   ILQKEPDVLTVSKPASVPVHPCGQYRKNTIVGILQAEHDLAPLFPIHRLDRLVSGL 169
           IL KE DV+TV KPA+VPVHPCGQYRKNT+VG+LQAEH LAPLFP+HRLDRLVSGL
Sbjct: 123 ILDKEDDVVTVWKPATVPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGL 178


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 385

 Score =  266 bits (680), Expect(2) = 5e-94
 Identities = 128/209 (61%), Positives = 156/209 (74%), Gaps = 1/209 (0%)
 Frame = +1

Query: 238 ARTASKADFFRQQIESGVVEKKYIAKVRGVFPEDEKIVNANVHFNAREGNSTVEVAENCG 417
           AR A KAD FRQ+IE+G+V+K+Y+AKV GVFPEDE++V  N+++NAREG ST EV  +C 
Sbjct: 179 ARNALKADLFRQEIEAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCV 238

Query: 418 NGVTALKGKVACTKFNRISTDGKHSIVSCQPFTGRTHQIRVHLQYIGYPIANDTMYLSES 597
           +     KGK ACTKF RIST+G HSIV C+P TGRTHQIRVHLQY G+PIAND +YLSE 
Sbjct: 239 DSPP--KGKTACTKFTRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEH 296

Query: 598 VDTGSTKGIRSTRESRLFSKSNSDGE-SGDASGKGSKNNFDIDPMCTNCPDLAPKGYDGY 774
             + S +G+ + R +   S   +  +   D   + S  +F IDPMCTNCP+LAPKGYD Y
Sbjct: 297 AASRSAEGMSADRAACSSSYCVTPQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVY 356

Query: 775 EEGLWLHCVQYTGPGWAYECPLPDWAILS 861
           EE LWLHCVQY+GPGW YECP PDWAILS
Sbjct: 357 EECLWLHCVQYSGPGWVYECPYPDWAILS 385



 Score =  105 bits (262), Expect(2) = 5e-94
 Identities = 47/56 (83%), Positives = 54/56 (96%)
 Frame = +2

Query: 2   ILQKEPDVLTVSKPASVPVHPCGQYRKNTIVGILQAEHDLAPLFPIHRLDRLVSGL 169
           +L K+PDV+TV KPA+VPVHPCGQYRKNT+VGILQAEH+LAPLFP+HRLDRLVSGL
Sbjct: 120 VLYKDPDVVTVYKPATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGL 175


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  257 bits (657), Expect(2) = 6e-93
 Identities = 131/209 (62%), Positives = 153/209 (73%), Gaps = 4/209 (1%)
 Frame = +1

Query: 238 ARTASKADFFRQQIESGVVEKKYIAKVRGVFPEDEKIVNANVHFNAREGNSTVEVAENCG 417
           AR+ASKAD FRQQIE+G+V+K+YIAKV GVFP+DE++VN NV++NAREG STV     CG
Sbjct: 167 ARSASKADSFRQQIEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTV--GNCCG 224

Query: 418 NGVTALKGKVACTKFNRISTDGKHSIVSCQPFTGRTHQIRVHLQYIGYPIANDTMYLSES 597
           N  T LKGK ACTKF RIST+G HSIV C+P TGRTHQIRVHLQY G+PIAND +YLSE 
Sbjct: 225 N--TPLKGKSACTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEF 282

Query: 598 VDTGSTKGI---RSTRESRLFSKSNSDGESGDA-SGKGSKNNFDIDPMCTNCPDLAPKGY 765
               STKG+   R+   S     S+S     D      S  +F IDPMCTNCP+L PKGY
Sbjct: 283 SVDRSTKGLSADRAAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGY 342

Query: 766 DGYEEGLWLHCVQYTGPGWAYECPLPDWA 852
           D  EEGLWLHC++Y GP W YECP P+WA
Sbjct: 343 DEDEEGLWLHCIRYCGPDWVYECPHPEWA 371



 Score =  110 bits (276), Expect(2) = 6e-93
 Identities = 51/56 (91%), Positives = 54/56 (96%)
 Frame = +2

Query: 2   ILQKEPDVLTVSKPASVPVHPCGQYRKNTIVGILQAEHDLAPLFPIHRLDRLVSGL 169
           +LQKEPDVLT+ KPASVPVHPCGQYRKNT+VGILQAEH LAPLFPIHRLDRLVSGL
Sbjct: 108 VLQKEPDVLTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGL 163


>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
           gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
           pseudourine synthase 7-like [Cucumis sativus]
          Length = 393

 Score =  257 bits (657), Expect(2) = 2e-90
 Identities = 124/210 (59%), Positives = 156/210 (74%), Gaps = 3/210 (1%)
 Frame = +1

Query: 238 ARTASKADFFRQQIESGVVEKKYIAKVRGVFPEDEKIVNANVHFNAREGNSTVEVAENCG 417
           AR ASKAD FRQQIESG+V+K+YIA+V GVFPE+E++V+AN+++N REG ST E+ ++  
Sbjct: 185 ARNASKADLFRQQIESGLVKKQYIARVVGVFPEEEQVVDANINYNPREGRSTAEMVDSST 244

Query: 418 NGVTALKGKVACTKFNRISTDGKHSIVSCQPFTGRTHQIRVHLQYIGYPIANDTMYLSES 597
           +  T  KGK A TKF RIS+DG HSIVSC+P TGRTHQIRVHLQY GYPIAND +YL++ 
Sbjct: 245 D--TRTKGKAAQTKFTRISSDGVHSIVSCEPITGRTHQIRVHLQYTGYPIANDALYLTKE 302

Query: 598 VDTGSTKGIRSTRESRLFSKSNSDGESGDASGKGSKN---NFDIDPMCTNCPDLAPKGYD 768
               S +   + R + +   S +     D +    +N   +F IDPMCTNCP+LAPKGY+
Sbjct: 303 ASGRSVQKTTADRAAAISFCSPARDVQEDCANACKENWSEDFGIDPMCTNCPNLAPKGYE 362

Query: 769 GYEEGLWLHCVQYTGPGWAYECPLPDWAIL 858
           G EEGLWLHCVQY+GPGW YECP P+WA L
Sbjct: 363 GEEEGLWLHCVQYSGPGWIYECPYPEWASL 392



 Score =  102 bits (254), Expect(2) = 2e-90
 Identities = 47/56 (83%), Positives = 53/56 (94%)
 Frame = +2

Query: 2   ILQKEPDVLTVSKPASVPVHPCGQYRKNTIVGILQAEHDLAPLFPIHRLDRLVSGL 169
           +L++E +VLTV KPASVPVHPCGQYRKNT+VGIL+AEH LAPLFPIHRLDRLVSGL
Sbjct: 126 VLKEEEEVLTVCKPASVPVHPCGQYRKNTVVGILEAEHGLAPLFPIHRLDRLVSGL 181