BLASTX nr result

ID: Bupleurum21_contig00015909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015909
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vit...   167   6e-40
emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]   167   6e-40
ref|XP_002526369.1| Auxin response factor, putative [Ricinus com...   164   5e-39
ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana] ...   151   6e-35
ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arab...   150   8e-35

>ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
           gi|297746231|emb|CBI16287.3| unnamed protein product
           [Vitis vinifera]
          Length = 798

 Score =  167 bits (424), Expect = 6e-40
 Identities = 83/121 (68%), Positives = 93/121 (76%)
 Frame = +2

Query: 5   SGIVTGLSDLDPYRWPKSKWRCLMVRWDENDASNHQDRVSPWEIDLSVSPPTLSIQPSPR 184
           SG+VTG+ DLDPYRWP SKWRCLMVRWD++  S+ Q+RVSPWEID SVS P LSIQ SPR
Sbjct: 352 SGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLPPLSIQSSPR 411

Query: 185 MKKQRICLQANQTNNPINARVGFLDFEESIRSSKVLQGQENVRQTPPLNGYDTRNCALNV 364
           +KK R  LQA   NNPIN   GFLDFEES+RSSKVLQGQENV    PL G D  N +L+ 
Sbjct: 412 LKKLRTSLQATPPNNPINGGGGFLDFEESVRSSKVLQGQENVGFVSPLYGCDKVNRSLDF 471

Query: 365 E 367
           E
Sbjct: 472 E 472


>emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
          Length = 744

 Score =  167 bits (424), Expect = 6e-40
 Identities = 83/121 (68%), Positives = 93/121 (76%)
 Frame = +2

Query: 5   SGIVTGLSDLDPYRWPKSKWRCLMVRWDENDASNHQDRVSPWEIDLSVSPPTLSIQPSPR 184
           SG+VTG+ DLDPYRWP SKWRCLMVRWD++  S+ Q+RVSPWEID SVS P LSIQ SPR
Sbjct: 347 SGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLPPLSIQSSPR 406

Query: 185 MKKQRICLQANQTNNPINARVGFLDFEESIRSSKVLQGQENVRQTPPLNGYDTRNCALNV 364
           +KK R  LQA   NNPIN   GFLDFEES+RSSKVLQGQENV    PL G D  N +L+ 
Sbjct: 407 LKKLRTSLQATPPNNPINGGGGFLDFEESVRSSKVLQGQENVGFVSPLYGCDKVNRSLDF 466

Query: 365 E 367
           E
Sbjct: 467 E 467


>ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
           gi|223534328|gb|EEF36040.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 810

 Score =  164 bits (416), Expect = 5e-39
 Identities = 81/115 (70%), Positives = 90/115 (78%)
 Frame = +2

Query: 5   SGIVTGLSDLDPYRWPKSKWRCLMVRWDENDASNHQDRVSPWEIDLSVSPPTLSIQPSPR 184
           SG+VTG+SDL+PYRWP SKWRCLMVRWDE+  ++HQ+RVSPWEID SVS P LSIQ SPR
Sbjct: 344 SGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDPSVSLPPLSIQSSPR 403

Query: 185 MKKQRICLQANQTNNPINARVGFLDFEESIRSSKVLQGQENVRQTPPLNGYDTRN 349
           +KK R  LQA   +NPI    GFLDFEES RSSKVLQGQENV    PL G DT N
Sbjct: 404 LKKLRTSLQATPPDNPITGGGGFLDFEESGRSSKVLQGQENVGFVSPLYGCDTMN 458


>ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
           gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin
           response factor 4 gi|12744969|gb|AAK06864.1|AF344313_1
           auxin response factor 4 [Arabidopsis thaliana]
           gi|4102598|gb|AAD01512.1| auxin response factor 4
           [Arabidopsis thaliana] gi|9757747|dbj|BAB08228.1| auxin
           response factor 4 [Arabidopsis thaliana]
           gi|19424051|gb|AAL87308.1| auxin response factor ARF4
           [Arabidopsis thaliana] gi|21280887|gb|AAM45025.1| auxin
           response factor ARF4 [Arabidopsis thaliana]
           gi|332009949|gb|AED97332.1| auxin response factor 4
           [Arabidopsis thaliana]
          Length = 788

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/116 (62%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
 Frame = +2

Query: 5   SGIVTGLSDLDPYRWPKSKWRCLMVRWDENDASNHQDRVSPWEIDLSVSPPTLSIQPSPR 184
           +G+VTG+ DLDPYRWP SKWRCL+VRWDE+  S+HQ+RVSPWEID SVS P LSIQ SPR
Sbjct: 361 AGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPR 420

Query: 185 MKKQRI-CLQANQTNNPINARVGFLDFEESIRSSKVLQGQENVRQTPPLNGYDTRN 349
            K+     L      NPI  R GFLDFEES+R SKVLQGQEN+    P  G+D  N
Sbjct: 421 PKRPWAGLLDTTPPGNPITKRGGFLDFEESVRPSKVLQGQENIGSASPSQGFDVMN 476


>ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
           lyrata] gi|297312216|gb|EFH42640.1| hypothetical protein
           ARALYDRAFT_496192 [Arabidopsis lyrata subsp. lyrata]
          Length = 791

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/116 (62%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
 Frame = +2

Query: 5   SGIVTGLSDLDPYRWPKSKWRCLMVRWDENDASNHQDRVSPWEIDLSVSPPTLSIQPSPR 184
           +G+VTG+ DLDPYRWP SKWRCL+VRWDE+  S+HQ+RVSPWEID S+S P LSIQ SPR
Sbjct: 356 AGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSISLPHLSIQSSPR 415

Query: 185 MKKQRI-CLQANQTNNPINARVGFLDFEESIRSSKVLQGQENVRQTPPLNGYDTRN 349
            K+     L      NPI  R GFLDFEES+R SKVLQGQEN+    P  G+D  N
Sbjct: 416 PKRPWAGLLDTTPPGNPITERGGFLDFEESVRPSKVLQGQENIGSASPSQGFDVMN 471


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