BLASTX nr result

ID: Bupleurum21_contig00015903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015903
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24303.3| unnamed protein product [Vitis vinifera]              268   5e-70
ref|XP_002266622.1| PREDICTED: THO complex subunit 7 homolog iso...   268   5e-70
emb|CAN73310.1| hypothetical protein VITISV_018158 [Vitis vinifera]   268   5e-70
gb|AAT40503.2| RIKEN cDNA 1500006O09, related [Solanum demissum]      257   1e-66
ref|XP_003543006.1| PREDICTED: THO complex subunit 7 homolog [Gl...   256   3e-66

>emb|CBI24303.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  268 bits (685), Expect = 5e-70
 Identities = 135/190 (71%), Positives = 154/190 (81%)
 Frame = +2

Query: 20  MLAKSRKVASRGDAISSHYAFGQHEDDTIIKHXXXXXXXXXXGEPPLKKLQKKFTSFALE 199
           ML K RKV+ RG+A+++HYAFG  EDDTIIKH          GEPPLKKLQKKFTSF LE
Sbjct: 28  MLVKGRKVSGRGEAMAAHYAFGP-EDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSFTLE 86

Query: 200 VEKDADNYSDCERLAKAFLQELTTFELPLLKSKAVIDANLREKENFNELKAEINRQIIQA 379
           +EKD DN+SDCERL+KAFLQE+TTFE+PLLKSKAVIDANLREKENFNELK +INR I+QA
Sbjct: 87  IEKDTDNFSDCERLSKAFLQEMTTFEIPLLKSKAVIDANLREKENFNELKDDINRMILQA 146

Query: 380 EDDIEDLKKQLEESKVERQHKEECETIRKLIAMEPPRSETQKVXXXXXXXXXXXXXXNVS 559
           + DIEDLKKQLEESK+ERQHKEECE IR+LIAM+PPRSET+K+              N +
Sbjct: 147 QADIEDLKKQLEESKIERQHKEECEAIRRLIAMQPPRSETEKIISELENEIAALEAENTA 206

Query: 560 GSRTLELRKK 589
           GSRTLELRKK
Sbjct: 207 GSRTLELRKK 216


>ref|XP_002266622.1| PREDICTED: THO complex subunit 7 homolog isoform 1 [Vitis vinifera]
           gi|359479144|ref|XP_003632225.1| PREDICTED: THO complex
           subunit 7 homolog isoform 2 [Vitis vinifera]
           gi|359479146|ref|XP_003632226.1| PREDICTED: THO complex
           subunit 7 homolog isoform 3 [Vitis vinifera]
          Length = 240

 Score =  268 bits (685), Expect = 5e-70
 Identities = 135/190 (71%), Positives = 154/190 (81%)
 Frame = +2

Query: 20  MLAKSRKVASRGDAISSHYAFGQHEDDTIIKHXXXXXXXXXXGEPPLKKLQKKFTSFALE 199
           ML K RKV+ RG+A+++HYAFG  EDDTIIKH          GEPPLKKLQKKFTSF LE
Sbjct: 1   MLVKGRKVSGRGEAMAAHYAFGP-EDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSFTLE 59

Query: 200 VEKDADNYSDCERLAKAFLQELTTFELPLLKSKAVIDANLREKENFNELKAEINRQIIQA 379
           +EKD DN+SDCERL+KAFLQE+TTFE+PLLKSKAVIDANLREKENFNELK +INR I+QA
Sbjct: 60  IEKDTDNFSDCERLSKAFLQEMTTFEIPLLKSKAVIDANLREKENFNELKDDINRMILQA 119

Query: 380 EDDIEDLKKQLEESKVERQHKEECETIRKLIAMEPPRSETQKVXXXXXXXXXXXXXXNVS 559
           + DIEDLKKQLEESK+ERQHKEECE IR+LIAM+PPRSET+K+              N +
Sbjct: 120 QADIEDLKKQLEESKIERQHKEECEAIRRLIAMQPPRSETEKIISELENEIAALEAENTA 179

Query: 560 GSRTLELRKK 589
           GSRTLELRKK
Sbjct: 180 GSRTLELRKK 189


>emb|CAN73310.1| hypothetical protein VITISV_018158 [Vitis vinifera]
          Length = 216

 Score =  268 bits (685), Expect = 5e-70
 Identities = 135/190 (71%), Positives = 154/190 (81%)
 Frame = +2

Query: 20  MLAKSRKVASRGDAISSHYAFGQHEDDTIIKHXXXXXXXXXXGEPPLKKLQKKFTSFALE 199
           ML K RKV+ RG+A+++HYAFG  EDDTIIKH          GEPPLKKLQKKFTSF LE
Sbjct: 1   MLVKGRKVSGRGEAMAAHYAFGP-EDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSFTLE 59

Query: 200 VEKDADNYSDCERLAKAFLQELTTFELPLLKSKAVIDANLREKENFNELKAEINRQIIQA 379
           +EKD DN+SDCERL+KAFLQE+TTFE+PLLKSKAVIDANLREKENFNELK +INR I+QA
Sbjct: 60  IEKDTDNFSDCERLSKAFLQEMTTFEIPLLKSKAVIDANLREKENFNELKDDINRMILQA 119

Query: 380 EDDIEDLKKQLEESKVERQHKEECETIRKLIAMEPPRSETQKVXXXXXXXXXXXXXXNVS 559
           + DIEDLKKQLEESK+ERQHKEECE IR+LIAM+PPRSET+K+              N +
Sbjct: 120 QADIEDLKKQLEESKIERQHKEECEAIRRLIAMQPPRSETEKIISELENEIAALEAENTA 179

Query: 560 GSRTLELRKK 589
           GSRTLELRKK
Sbjct: 180 GSRTLELRKK 189


>gb|AAT40503.2| RIKEN cDNA 1500006O09, related [Solanum demissum]
          Length = 271

 Score =  257 bits (656), Expect = 1e-66
 Identities = 130/190 (68%), Positives = 149/190 (78%)
 Frame = +2

Query: 20  MLAKSRKVASRGDAISSHYAFGQHEDDTIIKHXXXXXXXXXXGEPPLKKLQKKFTSFALE 199
           M  K RK A +G+ ++SHYAFG  EDD IIKH          GEPPLKKLQKKFT+FALE
Sbjct: 1   MSTKGRKFAVKGETVASHYAFGPLEDDIIIKHRLLTRTTTTRGEPPLKKLQKKFTTFALE 60

Query: 200 VEKDADNYSDCERLAKAFLQELTTFELPLLKSKAVIDANLREKENFNELKAEINRQIIQA 379
           +EK+ADNY+DCERLAKAFLQEL TFE+PLLKSK VIDAN+REKENFN+LK EIN+QI+QA
Sbjct: 61  IEKEADNYNDCERLAKAFLQELNTFEIPLLKSKVVIDANVREKENFNDLKGEINKQIVQA 120

Query: 380 EDDIEDLKKQLEESKVERQHKEECETIRKLIAMEPPRSETQKVXXXXXXXXXXXXXXNVS 559
           + DIEDLK+QLEESKVER+HKEE E IRKLIAM+PPRSETQKV              N +
Sbjct: 121 QADIEDLKRQLEESKVERKHKEEGEAIRKLIAMQPPRSETQKVITELEKEIAMLEAENTA 180

Query: 560 GSRTLELRKK 589
            SRTL+LRKK
Sbjct: 181 SSRTLDLRKK 190


>ref|XP_003543006.1| PREDICTED: THO complex subunit 7 homolog [Glycine max]
          Length = 242

 Score =  256 bits (653), Expect = 3e-66
 Identities = 127/191 (66%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
 Frame = +2

Query: 20  MLAKSRKVASRGDAISSHYAFGQHEDDTIIKHXXXXXXXXXXGEPPLKKLQKKFTSFALE 199
           ML K+RKV++RG++++++YAFG  EDD IIKH          G+PPLKKLQKKFTSF  E
Sbjct: 1   MLGKTRKVSARGESVAANYAFGPSEDDVIIKHRLLTRTTTTRGDPPLKKLQKKFTSFVSE 60

Query: 200 VEKDADN-YSDCERLAKAFLQELTTFELPLLKSKAVIDANLREKENFNELKAEINRQIIQ 376
           V+KD DN Y++C++LA+AFLQELTTFE+PLLKSKA+++AN+REKENFNELK E+NRQI+Q
Sbjct: 61  VDKDEDNNYNECDKLARAFLQELTTFEIPLLKSKAIVEANIREKENFNELKEEMNRQILQ 120

Query: 377 AEDDIEDLKKQLEESKVERQHKEECETIRKLIAMEPPRSETQKVXXXXXXXXXXXXXXNV 556
           A+DDIEDLKKQLEESKVER+HKEECE IRKLIAM+PPRSET KV              N 
Sbjct: 121 AQDDIEDLKKQLEESKVERRHKEECEAIRKLIAMQPPRSETMKVISELENEIAALDAENT 180

Query: 557 SGSRTLELRKK 589
           +GSR LELRKK
Sbjct: 181 AGSRLLELRKK 191


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