BLASTX nr result
ID: Bupleurum21_contig00015896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00015896
(2886 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus commu... 763 0.0
ref|XP_003593480.1| Katanin p80 WD40-containing subunit B1 [Medi... 695 0.0
ref|XP_004146637.1| PREDICTED: katanin p80 WD40 repeat-containin... 660 0.0
ref|XP_002889852.1| hypothetical protein ARALYDRAFT_471250 [Arab... 610 e-172
ref|NP_172582.2| WD40 domain-containing protein [Arabidopsis tha... 589 e-165
>ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus communis]
gi|223539311|gb|EEF40902.1| katanin P80 subunit, putative
[Ricinus communis]
Length = 936
Score = 763 bits (1971), Expect = 0.0
Identities = 435/965 (45%), Positives = 574/965 (59%), Gaps = 6/965 (0%)
Frame = -3
Query: 2878 LFITGGDDQVVNLWSIGKPAPLVSLSGHTSPVESVAFDPGEAFVVAGASAGAIKLWDMEQ 2699
++ITGGDD VNLW+IGKP L+SL GHTSPVES+AFD E V+ GAS G IKLWD+E+
Sbjct: 41 MYITGGDDYKVNLWAIGKPTSLMSLCGHTSPVESLAFDTAEVLVLGGASTGVIKLWDLEE 100
Query: 2698 AKMVSNFGGHRSYCTAVEFHQSGDFFASGSKDTNIKIWDIRKKERIHMYKGHVRGISTLR 2519
AKMV GHRS CTA+EFH G+FFASGS DTN+K+WDIRKK +H YKGH RGIST+R
Sbjct: 101 AKMVRTLTGHRSNCTAIEFHPFGEFFASGSADTNLKLWDIRKKGTLHTYKGHTRGISTIR 160
Query: 2518 FTPDGRWLVSGGLDNVVKIWDLTAGKLLHDLKFHQGHIRSIDFHPMELLMATGSADKTVK 2339
FTPDGRW+VSGGLDNVVK+WDLTAGKLLHD KFH+GHIRS+DFHP+E L+ATGSAD+TVK
Sbjct: 161 FTPDGRWVVSGGLDNVVKVWDLTAGKLLHDFKFHEGHIRSLDFHPLEFLLATGSADRTVK 220
Query: 2338 FWDLETFELIGSSKTESAGVRSIAFHPEGKTLCSGLDDCLKVYSWEPVVCHDTIDMGWST 2159
FWDLETFELIGS++ E+ GVR+I+FHP+G+TL GLDD LKVYSWEPV+CHD++D+GWST
Sbjct: 221 FWDLETFELIGSARPEATGVRAISFHPDGRTLFCGLDDSLKVYSWEPVICHDSVDIGWST 280
Query: 2158 LRDICIQDGKLLGGSYYQNLVGIWMTETLLVEPYKSSVAEPNSKCEQVHDKF---QDISL 1988
L D+CI + KLLG SYY+N V +W+ + L+EPY S C + KF + S
Sbjct: 281 LGDLCIHEEKLLGCSYYRNSVAVWVADVSLIEPYGVGFIPEESDC--IEKKFSIPKSDSP 338
Query: 1987 KKAGSFRRSTSSSTLQCISPDDEDKDIKNIYVDTAGENPVPARKARSIKSSKIVSLSNTN 1808
K S RSTS L+ +SPD E K+IKNIYVD+A PV ++K S+ S K V ++
Sbjct: 339 DKVRSGMRSTSH--LRSLSPDYESKEIKNIYVDSADGKPVSSQKVGSLTSPKRVLPLDSK 396
Query: 1807 EINDCRTQGEVPAVYSHVKPVGQTTANSFVLPTVVPQDSSDEKEGSRSWRESLTSTKAAL 1628
E+++ + ++P + K G+ SFV+PTVVP+D+ EK S S RE++T ++
Sbjct: 397 EMSNPPSDKKIPVTGGNAKADGEAFNKSFVVPTVVPRDNPIEKNSSNSGRETVTFSRTRP 456
Query: 1627 CMPDKTSHVSRATNTTLDVKSPPVVALS--FNDMKSSIESTKDLKTHCRVVADYDSKEPS 1454
M + +H+ R +N+ DV+ V S F++M S S DLK V + ++
Sbjct: 457 GMLLRPAHMQRLSNSKNDVEKLSVALESETFSNMPSEKVSAMDLKLQSLNVLEEGVQKSY 516
Query: 1453 QEKPQT-RIVAENSEKQLSSRTLSDHKKCNELLTGSKGVKPVRYVNGVAVVHGRTRSLVE 1277
+EK + VAE EK LS S + C+E + ++ + V+ +NGVAVV GRTRSLVE
Sbjct: 517 EEKSSDFKNVAEKFEKDLSPEKPSSQEHCDESVNNNRAIPSVKIINGVAVVAGRTRSLVE 576
Query: 1276 RFERKENLSMETQLHDPAPQGLSETSQAPMVVVDTPLKVIPDASKGSIPVVDSTPQVLPD 1097
RFER+E S E Q Q T+ P + + +P+A + + TP+++P+
Sbjct: 577 RFERREKFSNEDQSTSMESQTAGLTNSTPTMSTNVTPLSLPEAGRKPPIAISMTPRIVPE 636
Query: 1096 TAKLSTIVADSPLRMVHDTAKEPTIVVDVPSRITPNTRTSTSTVDLPPKLISNRARASSI 917
T I + + + + PT+ V R+ +D P +N
Sbjct: 637 TKTKPEIATNMSPHVFPEMDRTPTVATVVTPRV----------MDRIPVTATNMI----- 681
Query: 916 MADSPPRVTPESAKLSTIVADSPPRRNDTAKESTIVVDLPSRITPDTKASNTIVDLPPKL 737
P V PE+ + + I A + RR +
Sbjct: 682 -----PLVIPETDR-TPIAATNMTRR---------------------------------V 702
Query: 736 IPNRARASTILADSPPRAIPDTAKASTTAVNSPPLRPNRARASTIGVDAPPRVSNTTRLS 557
I R R+ D P AI + ++ +TA N T +
Sbjct: 703 ISERNRSPIATTDMTPEAISERGRSPSTATNM-----------------------TCHVV 739
Query: 556 TSVKRSSRPTSAPRLVTETLDASSMNSRPQLIRREPMFHSDDNVPEDLMKNHDVFLSNLR 377
+ R + P D++S N R +V E+LM+ HDVFLS ++
Sbjct: 740 HEMDRRTLPAMKEEPQISGRDSNSSNYR--------------DVSEELMQAHDVFLSTIK 785
Query: 376 SRLTKLQVVRHFLERNDIKGAINAMQKLPDHSVQAELISLLAEKMDIXXXXXXXXXXXXX 197
SRLTKLQVVRHF ERNDIKGAINA++KLPDHSVQA++IS+L EKM+I
Sbjct: 786 SRLTKLQVVRHFWERNDIKGAINALRKLPDHSVQADIISVLMEKMEILTLDLFSCLLPVL 845
Query: 196 XXXLDSKAERHVNIALEMLLKLVAVFGPVIRSTISAPPAVGVNLQAERRLECCSKCSILL 17
LDSK ERH ++LEMLLKLVAVFGPVIRSTIS PP VGVNL AE+RLECC +C + L
Sbjct: 846 VGLLDSKMERHTGVSLEMLLKLVAVFGPVIRSTISGPPLVGVNLHAEQRLECCKQCFVQL 905
Query: 16 QQIQK 2
Q+IQ+
Sbjct: 906 QKIQQ 910
>ref|XP_003593480.1| Katanin p80 WD40-containing subunit B1 [Medicago truncatula]
gi|355482528|gb|AES63731.1| Katanin p80 WD40-containing
subunit B1 [Medicago truncatula]
Length = 1131
Score = 695 bits (1793), Expect = 0.0
Identities = 424/1073 (39%), Positives = 600/1073 (55%), Gaps = 115/1073 (10%)
Frame = -3
Query: 2878 LFITGGDDQVVNLWSIGKPAPLVSLSGHTSPVESVAFDPGEAFVVAGASAGAIKLWDMEQ 2699
LF+TGGDD VNLW+IGKP L SLSGHTSPVESV FD GE V+AG+++G I+LWD+E+
Sbjct: 50 LFVTGGDDHKVNLWTIGKPTSLSSLSGHTSPVESVTFDSGEVLVLAGSTSGVIRLWDLEE 109
Query: 2698 AKMVSNFGGHRSYCTAVEFHQSGDFFASGSKDTNIKIWDIRKKERIHMYKGHVRGISTLR 2519
+KMV GHRS CT+VEFH G+FFASGS DTN+KIWD RKK IH YKGH +GIST++
Sbjct: 110 SKMVRTVAGHRSNCTSVEFHPFGEFFASGSMDTNLKIWDNRKKGCIHTYKGHSQGISTIK 169
Query: 2518 FTPDGRWLVSGGLDNVVKIWDLTAGKLLHDLKFHQGHIRSIDFHPMELLMATGSADKTVK 2339
FTPDGRW+VSGG DNVVK+WDLTAGKLLHD FH GHI S+DFHP+E L+ATGSAD+TVK
Sbjct: 170 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFNFHDGHITSLDFHPLEFLLATGSADRTVK 229
Query: 2338 FWDLETFELIGSSKTESAGVRSIAFHPEGKTLCSGLDDCLKVYSWEPVVCHDTIDMGWST 2159
FWDLE+FELIGS++ E+ GVRS+AFHP+G+TL SG +D LKV+SWEPV+CHDT+DMGW+
Sbjct: 230 FWDLESFELIGSARREATGVRSMAFHPDGRTLFSGHEDGLKVFSWEPVICHDTVDMGWTK 289
Query: 2158 LRDICIQDGKLLGGSYYQNLVGIWMTETLLVEPYKSSV-AEPNSKCEQVH----DKFQDI 1994
L D+CI DGKLLG SYY+N VG+W+ + L+EPY + + + EQ H K +++
Sbjct: 290 LGDLCIHDGKLLGCSYYRNSVGVWVADISLIEPYGDGLDLKKDIGTEQKHSLKGSKLENV 349
Query: 1993 SLKKAGSFRRSTSSSTLQCISPDDEDKDIKNIYVDTAGENPVPARKARSIKSSKIVSLSN 1814
+ ++ + ISP DE K+IKNIY+D++G PV +++ S S+K+
Sbjct: 350 EVDVG-------PTAGFRSISP-DESKEIKNIYIDSSGGKPVSLQRSASYHSAKVDLAEE 401
Query: 1813 TNEINDCRTQGEVPAVYSHVKPVGQTTANSFVLPTVVPQDSSDEKEGSRSWRESLTSTKA 1634
+ EI D T + PA HVK Q T S ++P + D K+ ++ +E++T +K
Sbjct: 402 SKEIYDLETLKQNPATKVHVKSNEQETRKSIIVPNI-----PDSKDSAKPVKETITFSKT 456
Query: 1633 ALCMPDKTSHVSRATNTTLDV-KSPPVVALSFNDMKSSIESTKDLKTHCRVVADYDSKEP 1457
M K +HV RA+ DV + V + +F D S ++S K K V + + KE
Sbjct: 457 KPGMLLKPAHVRRASTGRFDVDRFSDVNSRTFCDTASKLDSAKFPKFESYVGSQNEVKES 516
Query: 1456 SQEKPQTRIVAENSEKQLSSRTLSDHKKCNELLTGSKGVKPVRYVNGVAVVHGRTRSLVE 1277
++K + V + S K +S + + K E T ++ + PV+YVNGVAVV GRTRSLVE
Sbjct: 517 CEDKHPIKNVTDKSNKTVSPYKIFNLAKRVESSTCNEEITPVKYVNGVAVVRGRTRSLVE 576
Query: 1276 RFERKENLSM-ETQLHDPAPQ------------------------------GLSETSQAP 1190
RFER+E + + E +++ P P +TS+ P
Sbjct: 577 RFERREIVQVNEDEINAPLPTINEAGVNIHNEDQTNSYPTSVFERKEIIPCNEDQTSETP 636
Query: 1189 MVVVDTPLKV------IPDASKGSIPVVDSTPQVLPDTAKLSTIVADSPLRMVHD---TA 1037
VV + K+ ++ + + P+ T +V + ++ D T
Sbjct: 637 SVVFERKEKIPRNEDQTSESPSTAFERKERIPRNEVQTNAYPPMVFERKEKLPRDEDQTN 696
Query: 1036 KEPTIVVDVPSRITPNTRTSTSTVDLPPKLISNRARASSIMADSPPRVT---PESAKLST 866
+ P+ V + +I P T+ + R S + ++PP V + +
Sbjct: 697 ESPSSVFERKEKI-PRDEGQTNASPSTVFEMKERIPRSEVQTNAPPSVVFERKDRIPRTE 755
Query: 865 IVADSPP-----RRNDTAKESTIVVDLPS----------RITPDTKASNTIVDLPPKLIP 731
+ ++PP R+ ++ PS RI T AS+++V + IP
Sbjct: 756 VQTNAPPSTVFERKERIPRDEVQTNASPSTVFERKERIPRIEVQTNASSSVVFERKERIP 815
Query: 730 NRARASTILADSPPRAI---PDTAKASTTAVNSPPL----RPNRARASTIGVDAPPRVSN 572
+ + A++PP + + S N+ P R R S + +APP +
Sbjct: 816 R----NEVQANAPPSTVFERKERIPRSEGQTNASPSMVFERKERIPRSEVQTNAPPSLER 871
Query: 571 TTRLSTSV------------------------------------------KRSSRPT--S 524
R+ +V R++ P+ +
Sbjct: 872 KERIPRNVVQTNASLTLVSERKERISRNGVQANASLAMVSERKERIPRNEDRNNFPSIPN 931
Query: 523 APRLVTETLDASSMNSRPQLIRREPMFHSDDNVPEDLMKNHDVFLSNLRSRLTKLQVVRH 344
P + E+ + PQ+ +R+ ++ + E LM+ HDV LSNLRSRLTKLQVVRH
Sbjct: 932 TPSDIDESPSPNIPKLEPQVSQRDSSSPNEMAIIEGLMETHDVTLSNLRSRLTKLQVVRH 991
Query: 343 FLERNDIKGAINAMQKLPDHSVQAELISLLAEKMDIXXXXXXXXXXXXXXXXLDSKAERH 164
F ERNDIKGAI+A++KLPD SVQA++IS+L EKM+I LDSK ERH
Sbjct: 992 FWERNDIKGAISALRKLPDQSVQADVISVLMEKMEILTLDLLASLLPVLTGLLDSKTERH 1051
Query: 163 VNIALEMLLKLVAVFGPVIRSTISAPPAVGVNLQAERRLECCSKCSILLQQIQ 5
V ++L+MLLK AVFG I +TISAPP+VGV+L E+R ECC++C + LQ++Q
Sbjct: 1052 VKVSLDMLLKFAAVFGSTITATISAPPSVGVDLHREQRRECCNECFMELQKVQ 1104
Score = 64.7 bits (156), Expect = 1e-07
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Frame = -3
Query: 2503 RWLVSGGLDNVVKIWDLTAGKLLHDLKFHQGHIRSIDFHPMELLMATGSADKTVKFWDLE 2324
R V+GG D+ V +W + L L H + S+ F E+L+ GS ++ WDLE
Sbjct: 49 RLFVTGGDDHKVNLWTIGKPTSLSSLSGHTSPVESVTFDSGEVLVLAGSTSGVIRLWDLE 108
Query: 2323 TFELIGSSKTESAGVRSIAFHPEGKTLCSG-LDDCLKVYSWEPVVCHDTI---DMGWSTL 2156
+++ + + S+ FHP G+ SG +D LK++ C T G ST+
Sbjct: 109 ESKMVRTVAGHRSNCTSVEFHPFGEFFASGSMDTNLKIWDNRKKGCIHTYKGHSQGISTI 168
Query: 2155 RDICIQDGKLLGGSYYQNLVGIW 2087
+ DG+ + + N+V +W
Sbjct: 169 K--FTPDGRWVVSGGFDNVVKVW 189
>ref|XP_004146637.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Cucumis sativus]
Length = 922
Score = 660 bits (1702), Expect = 0.0
Identities = 399/969 (41%), Positives = 548/969 (56%), Gaps = 10/969 (1%)
Frame = -3
Query: 2878 LFITGGDDQVVNLWSIGKPAPLVSLSGHTSPVESVAFDPGEAFVVAGASAGAIKLWDMEQ 2699
LFITGGDD VNLW+IGKP L+SL GHT+PVESVAFD E V+AGAS+GAIKLWD+E+
Sbjct: 30 LFITGGDDYKVNLWAIGKPNSLMSLCGHTNPVESVAFDSAEVLVLAGASSGAIKLWDLEE 89
Query: 2698 AKMVSNFGGHRSYCTAVEFHQSGDFFASGSKDTNIKIWDIRKKERIHMYKGHVRGISTLR 2519
AKMV GHRS CTAVEFH G+FFASGS+DTN+KIWDIRKK IH YKGH +GIST++
Sbjct: 90 AKMVRTLSGHRSNCTAVEFHPFGEFFASGSRDTNLKIWDIRKKGCIHTYKGHTQGISTIK 149
Query: 2518 FTPDGRWLVSGGLDNVVKIWDLTAGKLLHDLKFHQGHIRSIDFHPMELLMATGSADKTVK 2339
FTPDGRW+VSGG D+ VK+WDLTAGKL+HD KFH+G IRSIDFHP+E L+ATGSADKTVK
Sbjct: 150 FTPDGRWVVSGGFDSAVKVWDLTAGKLMHDFKFHEGPIRSIDFHPLEFLLATGSADKTVK 209
Query: 2338 FWDLETFELIGSSKTESAGVRSIAFHPEGKTLCSGLDDCLKVYSWEPVVCHDTIDMGWST 2159
FWDLETFELIGS++ E+AGVR+I FHP+G+TL SGLD+ LKVYSWEPV+CHD++DMGWST
Sbjct: 210 FWDLETFELIGSTRPEAAGVRAITFHPDGRTLFSGLDESLKVYSWEPVICHDSVDMGWST 269
Query: 2158 LRDICIQDGKLLGGSYYQNLVGIWMTETLLVEPYKSSVA--EPNSKCEQVHDKFQD-ISL 1988
L D+CI GKLL S Y+N VG+W+ + L+EPY +S + K + + F++ ++
Sbjct: 270 LGDLCIHAGKLLSCSSYRNSVGVWVADVALIEPYGASSVSGQKEPKEQNLGSAFKNSLAS 329
Query: 1987 KKAGSFRRSTSSSTLQCISPDDEDKDIKNIYVDTAGENPVPARKARSIKSSKIVSLSNTN 1808
K GS +S LQ +SPD E K+IKNIY+DT G PV +KA S+ S KIV ++
Sbjct: 330 KSTGS---DLVTSNLQSLSPDYETKEIKNIYIDTTGGKPVSPQKAESLSSPKIVFALDSK 386
Query: 1807 EINDCRTQGEVPAVYSHVKPVGQTTANSFVLPTVVPQDSSDEKEGSRSWRESLTSTKAAL 1628
EI+ ++ + A VK ++ S P V+P DS + K+ S RES+T +K
Sbjct: 387 EISYNASKKQNLASRVEVK----SSELSKDKPPVIPCDSPEVKDPPSSVRESITFSKTRR 442
Query: 1627 CMPDKTSHVSRATNTTLDVKSPPVVALSFNDMKSSIESTKDLKTHCRVVADYDSKEPSQE 1448
M + +H+ + +N+ +D++ V S D C D + K P Q
Sbjct: 443 GMLLRPAHIRKPSNSKIDLEKLSVSVDSSRKTDLERLPVVDSVNVCNTTNDLN-KAPVQN 501
Query: 1447 KPQTRIVAENSEKQLSSRTLSDHKKCNELLTGSKGVKPVRYVNGVAVVH----GRTRSLV 1280
+T +V+E V+H G L+
Sbjct: 502 L-KTSVVSE-------------------------------------VIHVDPCGTNSDLI 523
Query: 1279 --ERFERKENLSMETQLHDPAPQGLSETSQ-APMVVVDTPLKVIPDASKGSIPVVDSTPQ 1109
E+FE+ ++S ET E S+ A V + V+P ++ + + +
Sbjct: 524 SIEKFEKIPSVSAETTSEQETCNKSVENSEGANSVKFVNGVAVVPGRTRTLVERFERREK 583
Query: 1108 VLPDTAKLSTIVADSPLRMVHDTAKEPTIVVDVPSRITPNTRTSTSTVDLPPKLISNRAR 929
T + T ++ PS + +T T L ++++ +
Sbjct: 584 ----TNDVQTTIS--------------------PSNVLEPEKTREQTNSLEVQVVTPQIL 619
Query: 928 ASSIMADSPPRVTPESAKLSTIVADSPPRRNDTAKESTIVVDLPSRITPDTKASNTIVDL 749
+ + + + V+++ R T+ V +PS ++
Sbjct: 620 ETEKTHEQTNDFRVHEVTMPSHVSETETRCERTSNYEVQAVAIPSHVSE----------- 668
Query: 748 PPKLIPNRARASTILADSPPRAIPDTAKASTTAVNSPPLRPNRARASTIGVDAPPRVSNT 569
P +AR T + IP T + +N +A PR +
Sbjct: 669 -----PEKAREQTNNYEVRAMVIPRTPETKRMGIN---------------YEAKPRSNYE 708
Query: 568 TRLSTSVKRSSRPTSAPRLVTETLDASSMNSRPQLIRREPMFHSDDNVPEDLMKNHDVFL 389
+ + + S S+ T+ D + PQ+ R+ +D +V EDLM++HDVFL
Sbjct: 709 AKTRNNYEAKSTLISSHVPETDKTD-NLQKGEPQISGRDSTSANDRDVIEDLMQSHDVFL 767
Query: 388 SNLRSRLTKLQVVRHFLERNDIKGAINAMQKLPDHSVQAELISLLAEKMDIXXXXXXXXX 209
S LRSRLTKLQVVRHF ERND+KGAINAM KLPDHSVQA++IS+L +KMD+
Sbjct: 768 STLRSRLTKLQVVRHFWERNDMKGAINAMTKLPDHSVQADVISVLVDKMDVLTLDLFSCL 827
Query: 208 XXXXXXXLDSKAERHVNIALEMLLKLVAVFGPVIRSTISAPPAVGVNLQAERRLECCSKC 29
LDSK ERH ++++E+L+KLVAVFG VI S +SAPP VGV+L AE+R++CC +C
Sbjct: 828 LPVLVGLLDSKIERHASLSMEILVKLVAVFGHVISSAVSAPPVVGVDLHAEQRVQCCKQC 887
Query: 28 SILLQQIQK 2
LQ++QK
Sbjct: 888 FTQLQKVQK 896
Score = 58.5 bits (140), Expect = 1e-05
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Frame = -3
Query: 2503 RWLVSGGLDNVVKIWDLTAGKLLHDLKFHQGHIRSIDFHPMELLMATGSADKTVKFWDLE 2324
R ++GG D V +W + L L H + S+ F E+L+ G++ +K WDLE
Sbjct: 29 RLFITGGDDYKVNLWAIGKPNSLMSLCGHTNPVESVAFDSAEVLVLAGASSGAIKLWDLE 88
Query: 2323 TFELIGSSKTESAGVRSIAFHPEGKTLCSGLDDC-LKVYSWEPVVCHDTI---DMGWSTL 2156
+++ + + ++ FHP G+ SG D LK++ C T G ST+
Sbjct: 89 EAKMVRTLSGHRSNCTAVEFHPFGEFFASGSRDTNLKIWDIRKKGCIHTYKGHTQGISTI 148
Query: 2155 RDICIQDGKLLGGSYYQNLVGIW-MTETLLVEPYK 2054
+ DG+ + + + V +W +T L+ +K
Sbjct: 149 K--FTPDGRWVVSGGFDSAVKVWDLTAGKLMHDFK 181
>ref|XP_002889852.1| hypothetical protein ARALYDRAFT_471250 [Arabidopsis lyrata subsp.
lyrata] gi|297335694|gb|EFH66111.1| hypothetical protein
ARALYDRAFT_471250 [Arabidopsis lyrata subsp. lyrata]
Length = 1024
Score = 610 bits (1573), Expect = e-172
Identities = 400/1036 (38%), Positives = 549/1036 (52%), Gaps = 77/1036 (7%)
Frame = -3
Query: 2878 LFITGGDDQVVNLWSIGKPAPLVSLSGHTSPVESVAFDPGEAFVVAGASAGAIKLWDMEQ 2699
L +TGGDD VNLWSIGK L+SL GHTSPV+SVAF+ GE V+ GAS+G IKLWD+E+
Sbjct: 30 LLLTGGDDYKVNLWSIGKTTSLMSLCGHTSPVDSVAFNSGEILVLGGASSGVIKLWDLEE 89
Query: 2698 AKMVSNFGGHRSYCTAVEFHQSGDFFASGSKDTNIKIWDIRKKERIHMYKGHVRGISTLR 2519
AKMV F GHRS C+AVEFH G+F ASGS DTN+++WD RKK I YKGH GIST+R
Sbjct: 90 AKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTCGISTIR 149
Query: 2518 FTPDGRWLVSGGLDNVVKIWDLTAGKLLHDLKFHQGHIRSIDFHPMELLMATGSADKTVK 2339
F+PDGRW+VSGGLDNVVK+WDLTAGKLLH+ KFH+G IRS+DFHP+E L+ATGSAD+TVK
Sbjct: 150 FSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVK 209
Query: 2338 FWDLETFELIGSSKTESAGVRSIAFHPEGKTLCSGLDDCLKVYSWEPVVCHDTIDMGWST 2159
FWDLETFELIGS++ E+AGVR+IAFHP+G+TL GLDD LKVYSWEPV+C D +DMGWST
Sbjct: 210 FWDLETFELIGSTRPEAAGVRAIAFHPDGQTLFCGLDDGLKVYSWEPVICRDGVDMGWST 269
Query: 2158 LRDICIQDGKLLGGSYYQNLVGIWMTETLLVEPYKSSVAEPNSKCEQVHDKFQDISLKKA 1979
L D CI +GK +G SYY+N VGIW+++ +EPY +V+E ++C + ++
Sbjct: 270 LGDFCINEGKFIGCSYYRNSVGIWVSDISELEPY-GAVSEDKNECMLKRFSVFNDQSERM 328
Query: 1978 GSFRRSTSSSTLQCISPDDEDKDIKNIYVDTAG------ENPVPARKARSIKSSKIVSLS 1817
GS R + +SPD E K+IKNIYVD+ G +NP + ++S K+ +++
Sbjct: 329 GSGPRGS-------VSPDYETKEIKNIYVDSTGGNSNVAQNPGSLKATLPLESGKVATMA 381
Query: 1816 NTNEINDCRTQGEVPAVYSHVKPVGQTTANSFVLPTVVPQDSSDEKEGSRSWRESLTSTK 1637
+ + A Y GQ + TV +DS +E S S RES+T ++
Sbjct: 382 SEKQ----------NATY-----FGQAGDKYSSMHTVASRDSDSGEESSYSERESITFSR 426
Query: 1636 AALCMPDKTSHVSRATNTTLDVKSPPVVALSFNDMKSSIESTKDLKTHCRVVADYDSKEP 1457
M + +HV R T + V S KS + ++ +T ++++ + +P
Sbjct: 427 TKSGMLLRPAHV-RKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQTQNVLLSEQNGSKP 485
Query: 1456 SQEKPQT-RIVAENSEKQLSSRTLSD------------HKKCNELLTGSKGV-------- 1340
+ T + + + EK LSS +D H+ N K V
Sbjct: 486 FDAEDSTIKGITDKFEKGLSSEPPTDETNRMFLKPPRVHRSSNSKYNDLKRVMSADSATF 545
Query: 1339 -------------------------KP------------VRYVNGVAVVHG------RTR 1289
KP R N V +V G RTR
Sbjct: 546 DKGGMEYSGEVEDICSKTERVLSPEKPGDEQKNTEYPSSSRESNPVKIVKGVNVVSGRTR 605
Query: 1288 SLVERFERKENLSMETQLHDPAPQGLSETSQAPMVVVDTPLKVIPDASKGSIPVVDSTPQ 1109
SLVE+FER E ++ H A + +Q V++ P K G PV+ ST +
Sbjct: 606 SLVEKFERGEKIT-----HTEAAS--TTITQNTNAVLEDPRKT--SRQTGETPVI-STRR 655
Query: 1108 VLPDTAKLSTIVADSPLRMVHD----TAKEPTIVVDVPSRITPNTRTSTSTVDLPPKLIS 941
A++ IV + M D T T V +P ++ T + L + +
Sbjct: 656 ARSTPARVMPIVLNRDSNMTSDEPLLTQPARTSVPVMPVILSQATNVTYDEPRLTQESRT 715
Query: 940 NRARASSIMADSPPRVTPESAKLSTIVADSPPRRNDTAKESTIVV---DLPSRITPDTKA 770
+ +R + + +T E A V PRRN A+ + + D+ S P T
Sbjct: 716 SPSRILPVTFNQATNITSEEAS----VTSRRPRRNSAARVRPVSLSQADMTSHECPVTSV 771
Query: 769 SNTIVDLPPKLIPNRARASTILADSPPRAIPDTAKASTTAVNSPPLRPNRARASTIGVDA 590
P R SP R +P S + +R R S
Sbjct: 772 R-----------PART--------SPARVMPTKLNQSVNMTSDTSHIASRHRVS------ 806
Query: 589 PPRVSNTTRLSTSVKRSSRPTSAPRLVTETLDASSMNSRPQLIRREPMFHSDDNVPEDLM 410
P ++ T + V + + + D P + RE +D ++ E+LM
Sbjct: 807 PTQMLTTPTVIDQVADMTLDETHATQIQPACDNLPQKEEPNISERE----NDSDITENLM 862
Query: 409 KNHDVFLSNLRSRLTKLQVVRHFLERNDIKGAINAMQKLPDHSVQAELISLLAEKMDIXX 230
H+ FL+ L+SRLTKLQ+VRHF ER+D+KGAI A++KL D SVQA++IS+L +K++I
Sbjct: 863 LTHNKFLTTLQSRLTKLQIVRHFWERSDVKGAIGALRKLTDQSVQADVISILTDKIEILT 922
Query: 229 XXXXXXXXXXXXXXLDSKAERHVNIALEMLLKLVAVFGPVIRSTISAPPAVGVNLQAERR 50
L S+ ER VN++L+MLLKLVAVFG VIRST+SAP VGV+L A+ R
Sbjct: 923 LDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGTVIRSTVSAPRIVGVDLHADER 982
Query: 49 LECCSKCSILLQQIQK 2
LE C CS L +IQ+
Sbjct: 983 LEICQICSAGLHKIQR 998
Score = 63.2 bits (152), Expect = 4e-07
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 5/179 (2%)
Frame = -3
Query: 2575 KKERIHMYKGHVRGISTLRFTPDGRWLVSGGLDNVVKIWDLTAGKLLHDLKFHQGHIRSI 2396
K + + G+V +S + T R L++GG D V +W + L L H + S+
Sbjct: 7 KLQEFVAHSGNVNCLSIGKKT--SRLLLTGGDDYKVNLWSIGKTTSLMSLCGHTSPVDSV 64
Query: 2395 DFHPMELLMATGSADKTVKFWDLETFELIGSSKTESAGVRSIAFHPEGKTLCSGLDDC-L 2219
F+ E+L+ G++ +K WDLE +++ + + ++ FHP G+ L SG D L
Sbjct: 65 AFNSGEILVLGGASSGVIKLWDLEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNL 124
Query: 2218 KVYSWEPVVCHDTI---DMGWSTLRDICIQDGKLLGGSYYQNLVGIW-MTETLLVEPYK 2054
+V+ C T G ST+R DG+ + N+V +W +T L+ +K
Sbjct: 125 RVWDTRKKGCIQTYKGHTCGISTIR--FSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFK 181
>ref|NP_172582.2| WD40 domain-containing protein [Arabidopsis thaliana]
gi|332190571|gb|AEE28692.1| WD40 domain-containing
protein [Arabidopsis thaliana]
Length = 1021
Score = 589 bits (1518), Expect = e-165
Identities = 380/1005 (37%), Positives = 541/1005 (53%), Gaps = 46/1005 (4%)
Frame = -3
Query: 2878 LFITGGDDQVVNLWSIGKPAPLVSLSGHTSPVESVAFDPGEAFVVAGASAGAIKLWDMEQ 2699
L +TGGDD VNLWSIGK +SL GHTSPV+SVAF+ E V+AGAS+G IKLWD+E+
Sbjct: 30 LLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEE 89
Query: 2698 AKMVSNFGGHRSYCTAVEFHQSGDFFASGSKDTNIKIWDIRKKERIHMYKGHVRGISTLR 2519
+KMV F GHRS C+AVEFH G+F ASGS DTN+++WD RKK I YKGH RGIST+
Sbjct: 90 SKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIE 149
Query: 2518 FTPDGRWLVSGGLDNVVKIWDLTAGKLLHDLKFHQGHIRSIDFHPMELLMATGSADKTVK 2339
F+PDGRW+VSGGLDNVVK+WDLTAGKLLH+ K H+G IRS+DFHP+E L+ATGSAD+TVK
Sbjct: 150 FSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVK 209
Query: 2338 FWDLETFELIGSSKTESAGVRSIAFHPEGKTLCSGLDDCLKVYSWEPVVCHDTIDMGWST 2159
FWDLETFELIG+++ E+ GVR+IAFHP+G+TL GLDD LKVYSWEPV+C D +DMGWST
Sbjct: 210 FWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWEPVICRDGVDMGWST 269
Query: 2158 LRDICIQDGKLLGGSYYQNLVGIWMTETLLVEPYKSSVAEPNSKCEQVHDKFQDISLKKA 1979
L D CI +GK +G SYY+N VGIW+++ +EPY +V+E ++C + ++
Sbjct: 270 LGDFCINEGKFIGCSYYRNSVGIWVSDISELEPY-GAVSEDKNECMVKRFSVLNDQSERM 328
Query: 1978 GSFRRSTSSSTLQCISPDDEDKDIKNIYVDTAGENPVPARKARSIKSSKIVSLSNTNEIN 1799
GS R + +SPD E ++IKNIYVD+ G N A+ S+K++ + E
Sbjct: 329 GSGPRGS-------VSPDYETREIKNIYVDSTGGNLNVAQNPGSLKATLPL------ESG 375
Query: 1798 DCRTQGEVPAVYSHVKPVGQTTANSFVLPTVVPQDSSDEKEGSRSWRESLTSTKAALCMP 1619
T ++ P G +++ +DS +E S S RES+ ++ M
Sbjct: 376 KVATMVSEKQNAAYFGPAGDKYSST-------SRDSDSGEESSYSERESIPFSRTKSGML 428
Query: 1618 DKTSHVSRATNTTLDVKSPPVVALSFNDMKSSIESTKDLKTHCRVVADYDSKEP-SQEKP 1442
+ +HV R T + V S KS + ++ +T +++ ++ +P E
Sbjct: 429 LRPAHV-RKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQTQNAFLSEQNASKPFDAEDS 487
Query: 1441 QTRIVAENSEKQLSSRTLSD------------HKKCNELLTGSK---GVKPVRYVNGVAV 1307
+ + EK LSS +D H+ N ++ P + G
Sbjct: 488 IIKGITNKFEKALSSEPPTDEANRMFLKPPRIHRSSNSKYNDTRRAMSADPATFGKGGME 547
Query: 1306 VHGRTRSLVERFER--KENLSMETQLHDPAPQGLSETSQAPMVVVDTPLKVIPDASKGSI 1133
G + + ER + Q + P G E + P+ +V+ + V+ ++ +
Sbjct: 548 NSGDVEDIPSKTERVLSREKPGDEQKNTEYPSGSRELN--PVKIVE-GVNVVSGRTRSLV 604
Query: 1132 PVVDSTPQVLPDTAKLSTI------VADSPLRMVHDTAKEPTIVVDVPSRITPNTRTSTS 971
+ + +TI V + P + T + P I +TR + S
Sbjct: 605 EKFERGEKTTHTEGASTTIEQNNNAVQEDPRKTSRQTGETPVI----------STRRARS 654
Query: 970 TVDLPPKLISNRARASSIMADSPPRVTP-ESAKLSTIVADSPPRRNDTAKESTIVVDLPS 794
T ++ N R S++ +D PP P ++ + N T E ++ + S
Sbjct: 655 TPARVMPIVLN--RDSNVTSDEPPLTQPARTSSFPVMPVILNQASNVTYDEPSVALTQES 712
Query: 793 -----RITPDTKASNTIVDLPPKLIPNRARASTILADSPPRAIPDTAKASTTAVNSPPLR 629
RI P T T + + R + A P + + PLR
Sbjct: 713 RTSHARILPVTFNQATNITSEEASVTLRRQRRNSAARVRPVLLSQATSHECPVTSVRPLR 772
Query: 628 PNRARASTIGVDAPPRVSNTTRLSTSVKRSS------RPTSAPRLVTETLDAS------- 488
+ AR ++ +++ T S+ R S PT ++ TLD +
Sbjct: 773 TSPARVMPTKLNQSVNMTSDTSHIASMHRVSPTQMLATPTVIDQVADMTLDETHATQIQP 832
Query: 487 SMNSRPQLIRREPMF---HSDDNVPEDLMKNHDVFLSNLRSRLTKLQVVRHFLERNDIKG 317
+ ++ PQ + EP D ++ E+LM H+ FLS L+SRLTKLQ+VRHF ER+D+KG
Sbjct: 833 ACDNMPQ--KEEPNISDREDDSDITENLMLTHNEFLSTLQSRLTKLQIVRHFWERSDVKG 890
Query: 316 AINAMQKLPDHSVQAELISLLAEKMDIXXXXXXXXXXXXXXXXLDSKAERHVNIALEMLL 137
AI A++KL D SVQA++IS+L EK++I L S+ ER VN++L+MLL
Sbjct: 891 AIGALRKLTDQSVQADVISILTEKIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLL 950
Query: 136 KLVAVFGPVIRSTISAPPAVGVNLQAERRLECCSKCSILLQQIQK 2
KLVAVFG VIRST+SAP VGV+L A RLE C CS L +IQ+
Sbjct: 951 KLVAVFGTVIRSTVSAPRIVGVDLHANERLEICQICSAGLHKIQR 995
Score = 59.3 bits (142), Expect = 6e-06
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 5/179 (2%)
Frame = -3
Query: 2575 KKERIHMYKGHVRGISTLRFTPDGRWLVSGGLDNVVKIWDLTAGKLLHDLKFHQGHIRSI 2396
K + + G+V +S + T R L++GG D V +W + L H + S+
Sbjct: 7 KLQEFVAHSGNVNCLSIGKKT--SRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSV 64
Query: 2395 DFHPMELLMATGSADKTVKFWDLETFELIGSSKTESAGVRSIAFHPEGKTLCSGLDDC-L 2219
F+ E+L+ G++ +K WDLE +++ + + ++ FHP G+ L SG D L
Sbjct: 65 AFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNL 124
Query: 2218 KVYSWEPVVCHDTI---DMGWSTLRDICIQDGKLLGGSYYQNLVGIW-MTETLLVEPYK 2054
+V+ C T G ST+ DG+ + N+V +W +T L+ +K
Sbjct: 125 RVWDTRKKGCIQTYKGHTRGISTIE--FSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFK 181