BLASTX nr result

ID: Bupleurum21_contig00015875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015875
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534495.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240...   102   3e-20
emb|CAN62996.1| hypothetical protein VITISV_026902 [Vitis vinifera]   102   3e-20
ref|XP_003638559.1| Nuclear receptor corepressor [Medicago trunc...    97   2e-18
ref|XP_003591951.1| Nuclear receptor corepressor [Medicago trunc...    97   2e-18

>ref|XP_002534495.1| conserved hypothetical protein [Ricinus communis]
            gi|223525187|gb|EEF27889.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1651

 Score =  103 bits (258), Expect = 1e-20
 Identities = 58/116 (50%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
 Frame = -2

Query: 346  PTRELGGSKGVADYQTYRNCDGATLQPFAVDLKQQQNRYFSEMQRQRRGGEFDAVSSVPQ 167
            P RE+ GS GV DYQ +R+   + +QPF+V++KQ+Q+   SE+QR      F+ +SS+ Q
Sbjct: 1518 PPREISGSNGVVDYQMFRSNGSSKVQPFSVEMKQRQDM-LSEIQRI---SGFEGISSLQQ 1573

Query: 166  QARGMVGLDVLGRDGVILGSGPRNTVSDPVAAIRRHYA-GEQYNGQIMNIGRKEEA 2
            Q RGMVG++V+GR G+I+G G    VSDPVAA++ HYA  EQY+GQ   I R+EE+
Sbjct: 1574 QGRGMVGVNVVGRGGIIVG-GSCTGVSDPVAALKMHYAKSEQYSGQSGTIVREEES 1628


>ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240985 [Vitis vinifera]
          Length = 1940

 Score =  102 bits (254), Expect = 3e-20
 Identities = 61/118 (51%), Positives = 82/118 (69%), Gaps = 3/118 (2%)
 Frame = -2

Query: 346  PTRELGGSKGVADY-QTYRNCDGATLQPFAVDLKQQQNRYFSEMQRQRRGGEFDAVSSVP 170
            PTR++  S GVADY Q +R  D   LQPF VD+KQ+Q+  FSEMQR  R G F+AVSS+ 
Sbjct: 1745 PTRDMSSSNGVADYHQVFRGRDCTKLQPFTVDMKQRQD-LFSEMQR--RNG-FEAVSSLQ 1800

Query: 169  QQARGMVGLDVLGRDGVILGSGPRNTVSDPVAAIRRHYA--GEQYNGQIMNIGRKEEA 2
               RGMVG++V+GR G+++G     +VSDPVAAI+ HYA   +Q+ GQ  +I R +E+
Sbjct: 1801 APGRGMVGMNVVGRGGILVGGACTPSVSDPVAAIKMHYAKTTDQFGGQGGSIIRDDES 1858


>emb|CAN62996.1| hypothetical protein VITISV_026902 [Vitis vinifera]
          Length = 1971

 Score =  102 bits (254), Expect = 3e-20
 Identities = 61/118 (51%), Positives = 82/118 (69%), Gaps = 3/118 (2%)
 Frame = -2

Query: 346  PTRELGGSKGVADY-QTYRNCDGATLQPFAVDLKQQQNRYFSEMQRQRRGGEFDAVSSVP 170
            PTR++  S GVADY Q +R  D   LQPF VD+KQ+Q+  FSEMQR  R G F+AVSS+ 
Sbjct: 1636 PTRDMSSSNGVADYHQVFRGRDCTKLQPFTVDMKQRQD-LFSEMQR--RNG-FEAVSSLQ 1691

Query: 169  QQARGMVGLDVLGRDGVILGSGPRNTVSDPVAAIRRHYA--GEQYNGQIMNIGRKEEA 2
               RGMVG++V+GR G+++G     +VSDPVAAI+ HYA   +Q+ GQ  +I R +E+
Sbjct: 1692 APGRGMVGMNVVGRGGILVGGACTPSVSDPVAAIKMHYAKTTDQFGGQGGSIIRDDES 1749


>ref|XP_003638559.1| Nuclear receptor corepressor [Medicago truncatula]
            gi|355504494|gb|AES85697.1| Nuclear receptor corepressor
            [Medicago truncatula]
          Length = 1655

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/114 (45%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
 Frame = -2

Query: 340  RELGGSKGVADYQTYRNCDGATLQPFAVDLKQQQNRYFSEMQRQRRGGEFDAVSSVPQQA 161
            R++ GS  + DYQ +R  DG  +QPF VD++ +Q+  FSEMQR+     F+A+SS+ QQ 
Sbjct: 1538 RDVNGSNAMLDYQMFRGRDGPQVQPFMVDVQHRQD-LFSEMQRRH---SFEAISSLQQQG 1593

Query: 160  RGMVGLDVLGRDGVILGSGPRNTVSDPVAAIRRHYA-GEQYNGQIMNIGRKEEA 2
            RGM+G++ +GR G+++G G  + VSDPVAAI+ HY+  E+Y GQ  ++ R +E+
Sbjct: 1594 RGMMGMNSVGRPGILVG-GSCSGVSDPVAAIKMHYSNSEKYGGQNGSVVRDDES 1646


>ref|XP_003591951.1| Nuclear receptor corepressor [Medicago truncatula]
            gi|355480999|gb|AES62202.1| Nuclear receptor corepressor
            [Medicago truncatula]
          Length = 1682

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/114 (45%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
 Frame = -2

Query: 340  RELGGSKGVADYQTYRNCDGATLQPFAVDLKQQQNRYFSEMQRQRRGGEFDAVSSVPQQA 161
            R++ GS  + DYQ +R  DG  +QPF VD++ +Q+  FSEMQR+     F+A+SS+ QQ 
Sbjct: 1565 RDVNGSNAMLDYQMFRGRDGPQVQPFMVDVQHRQD-LFSEMQRRH---SFEAISSLQQQG 1620

Query: 160  RGMVGLDVLGRDGVILGSGPRNTVSDPVAAIRRHYA-GEQYNGQIMNIGRKEEA 2
            RGM+G++ +GR G+++G G  + VSDPVAAI+ HY+  E+Y GQ  ++ R +E+
Sbjct: 1621 RGMMGMNSVGRPGILVG-GSCSGVSDPVAAIKMHYSNSEKYGGQNGSVVRDDES 1673


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