BLASTX nr result

ID: Bupleurum21_contig00015837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015837
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592857.1| AP2 domain-containing transcription factor [...   127   3e-27
ref|XP_002894269.1| hypothetical protein ARALYDRAFT_474200 [Arab...   122   1e-25
ref|NP_175524.1| RAV-like factor [Arabidopsis thaliana] gi|75268...   119   1e-24
ref|XP_002891618.1| hypothetical protein ARALYDRAFT_474227 [Arab...   117   3e-24
ref|XP_002276492.1| PREDICTED: AP2/ERF and B3 domain-containing ...   117   4e-24

>ref|XP_003592857.1| AP2 domain-containing transcription factor [Medicago truncatula]
           gi|355481905|gb|AES63108.1| AP2 domain-containing
           transcription factor [Medicago truncatula]
          Length = 298

 Score =  127 bits (320), Expect = 3e-27
 Identities = 61/142 (42%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
 Frame = -2

Query: 680 VLALSNTQKQASIESAIARNNDNTNLSSPVNA-LQMHGNQNFECTRL-FEKVLTASDTSN 507
           ++ + N    ++  +   RNN+    +      + +   + F CT+L F+K LT SD   
Sbjct: 114 MIMIRNGTYPSNFATTFLRNNERRQGAGKEGVVIGVKDEEQFSCTQLLFQKELTPSDVGK 173

Query: 506 LNRFLVPKLHA-SHFPCICGDNDAELTFYDRSMTLWTFRYCYWKSSHSRVFSKGWSKFLH 330
           LNR +VPK HA ++FP +CG ND E+ FYD+ M LW FRYCYWKSS S VF++GW++F+ 
Sbjct: 174 LNRLVVPKKHAVTYFPLVCG-NDVEVVFYDKLMRLWKFRYCYWKSSQSYVFTRGWNRFVK 232

Query: 329 DKSLRSKDKVVFYECKRLEATN 264
           DK L++KD +VFY C+ +  TN
Sbjct: 233 DKKLKAKDTIVFYRCEPINLTN 254


>ref|XP_002894269.1| hypothetical protein ARALYDRAFT_474200 [Arabidopsis lyrata subsp.
           lyrata] gi|297340111|gb|EFH70528.1| hypothetical protein
           ARALYDRAFT_474200 [Arabidopsis lyrata subsp. lyrata]
          Length = 337

 Score =  122 bits (307), Expect = 1e-25
 Identities = 77/195 (39%), Positives = 105/195 (53%), Gaps = 22/195 (11%)
 Frame = -2

Query: 560 FECTRLFEKVLTASDTSNLNRFLVPKLHA-SHFPCICGDN-------------DAELTFY 423
           F CT+LF+K LT SD   LNR ++PK +A  + P I  D              D E+ FY
Sbjct: 151 FSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKEDGEIGGSVEDVEVVFY 210

Query: 422 DRSMTLWTFRYCYWKSSHSRVFSKGWSKFLHDKSLRSKDKVVFYEC------KRLEATNV 261
           DR+M  W FRYCYWKSS S VF++GW+ F+ +K+L+ KD +VFY C      K LE  + 
Sbjct: 211 DRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIVFYTCDVPNNVKTLEGQS- 269

Query: 260 VHTYFMIVVEYYVNG--VWVEEVDANVRVNDDDKDNGVETSSVRGDMASKAVKQLGSNES 87
             T+ MI V Y+ +   V  EEV   V    D  + G++T +    ++SK+  +    E 
Sbjct: 270 -KTFLMIDVHYFSDNGTVVAEEVSMTVH---DSSEEGMKTENF---VSSKSKDKETKTEE 322

Query: 86  EKAPATGFKLFGVNI 42
            K    GF LFGV I
Sbjct: 323 NKG---GFMLFGVRI 334


>ref|NP_175524.1| RAV-like factor [Arabidopsis thaliana]
           gi|75268188|sp|Q9C688.1|RAVL3_ARATH RecName:
           Full=AP2/ERF and B3 domain-containing transcription
           factor At1g51120; AltName: Full=RAV1-like
           ethylene-responsive transcription factor At1g51120
           gi|12320776|gb|AAG50531.1|AC079828_2 DNA-binding protein
           RAV1, putative [Arabidopsis thaliana]
           gi|48479358|gb|AAT44950.1| putative AP2/EREBP
           transcription factor [Arabidopsis thaliana]
           gi|332194503|gb|AEE32624.1| RAV-like factor [Arabidopsis
           thaliana]
          Length = 352

 Score =  119 bits (298), Expect = 1e-24
 Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 18/194 (9%)
 Frame = -2

Query: 569 NQNFECTRLFEKVLTASDTSNLNRFLVPKLHA-SHFPCICGDN----------DAELTFY 423
           N+ F CT+LF+K LT SD   LNR ++PK +A  + P I  D           D E+ FY
Sbjct: 169 NKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFY 228

Query: 422 DRSMTLWTFRYCYWKSSHSRVFSKGWSKFLHDKSLRSKDKVVFYEC------KRLEATNV 261
           DR+M  W FRYCYW+SS S VF++GW+ F+ +K+L+ KD +VFY C      K LE  + 
Sbjct: 229 DRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVFYTCDVPNNVKTLEGQS- 287

Query: 260 VHTYFMIVVEYYVNGVWVEEVDANVRVND-DDKDNGVETSSVRGDMASKAVKQLGSNESE 84
             T+ MI V ++    +V   + N  V++  D++   ET      + +  V++   +E +
Sbjct: 288 -KTFLMIDVHHFSGNGFVVPEEVNKTVHEISDEEMKTET------LFTSKVEEETKSEEK 340

Query: 83  KAPATGFKLFGVNI 42
           K    GF LFGV I
Sbjct: 341 KG---GFMLFGVRI 351


>ref|XP_002891618.1| hypothetical protein ARALYDRAFT_474227 [Arabidopsis lyrata subsp.
           lyrata] gi|297337460|gb|EFH67877.1| hypothetical protein
           ARALYDRAFT_474227 [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score =  117 bits (294), Expect = 3e-24
 Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 19/195 (9%)
 Frame = -2

Query: 569 NQNFECTRLFEKVLTASDTSNLNRFLVPKLHA-SHFPCICGDN----------DAELTFY 423
           N+ F CT+LF+K LT SD   LNR ++PK +A  + P I  D           D E+ FY
Sbjct: 170 NKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFY 229

Query: 422 DRSMTLWTFRYCYWKSSHSRVFSKGWSKFLHDKSLRSKDKVVFYEC------KRLEATNV 261
           DR+M  W FRYCYW+SS S VF++GW+ F+ +K+L+ KD +VFY C      K LE  + 
Sbjct: 230 DRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVFYTCDVPSNVKTLEGQS- 288

Query: 260 VHTYFMIVVEYYV-NGVWV-EEVDANVRVNDDDKDNGVETSSVRGDMASKAVKQLGSNES 87
              + MI V Y+  NG  + EEV+  V  + D++   ++T ++    +SK  ++  S E 
Sbjct: 289 -KNFLMIDVHYFSGNGFNLPEEVNKTVHESSDEE---MKTETL---FSSKLEEETKSEEK 341

Query: 86  EKAPATGFKLFGVNI 42
           +     GF LFGV I
Sbjct: 342 K----GGFMLFGVRI 352


>ref|XP_002276492.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
           At1g51120-like [Vitis vinifera]
          Length = 357

 Score =  117 bits (293), Expect = 4e-24
 Identities = 74/202 (36%), Positives = 101/202 (50%), Gaps = 23/202 (11%)
 Frame = -2

Query: 578 MHGNQNFECTRLFEKVLTASDTSNLNRFLVPKLHAS-HFPCICGDN----------DAEL 432
           +H N  F C  LF+K LT SD   LNR ++PK +A+ HFP I              D +L
Sbjct: 157 VHRNGRFMCRLLFQKELTPSDVGKLNRLVIPKKYATKHFPPISESAEENEVGGAAADMQL 216

Query: 431 TFYDRSMTLWTFRYCYWKSSHSRVFSKGWSKFLHDKSLRSKDKVVFYECKRLEATNVVHT 252
            FYDR M LW FRYCYW+SS S VF++GW++F+ DK L   D V FY C+  + T    T
Sbjct: 217 VFYDRLMRLWKFRYCYWRSSQSYVFTRGWNRFVKDKELNENDIVTFYLCEYGQGTKEGRT 276

Query: 251 YFMIVVEY--------YVNGVWVE----EVDANVRVNDDDKDNGVETSSVRGDMASKAVK 108
           + MI V Y          NG +VE     V   + +  D K N       R   + +  +
Sbjct: 277 FCMIDVAYDRSTDGRDANNGSFVEGPNRYVGLQIELQQDLKQNIGYNKHER--KSQEEEE 334

Query: 107 QLGSNESEKAPATGFKLFGVNI 42
            +G+  + +    G +LFGV I
Sbjct: 335 SVGTEPALEGQKKGLRLFGVQI 356


Top