BLASTX nr result

ID: Bupleurum21_contig00015829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015829
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF49721.1| centromeric histone H3-like protein-1 [Cardamine...    69   4e-10
dbj|BAF49724.1| centromeric histone H3-like protein-4 [Cardamine...    69   4e-10
dbj|BAF49723.1| centromeric histone H3-like protein-3 [Cardamine...    69   5e-10
dbj|BAF49717.1| putative centromeric histone H3-like protein_1 [...    69   5e-10
dbj|BAF49722.1| centromeric histone H3-like protein-2 [Cardamine...    69   5e-10

>dbj|BAF49721.1| centromeric histone H3-like protein-1 [Cardamine flexuosa]
          Length = 176

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/55 (65%), Positives = 42/55 (76%)
 Frame = -3

Query: 267 KRSSLSFTSGQKQRKPHRFKPGTVALREIRHFQKSFKLLIPAAPFIRTVTSITTL 103
           KR+  +   G  Q+KP+R+KPGTVALREIRHFQKS  LLIPAA FIR V SIT +
Sbjct: 61  KRTRRAMPQGS-QKKPNRYKPGTVALREIRHFQKSTNLLIPAASFIRQVRSITQM 114


>dbj|BAF49724.1| centromeric histone H3-like protein-4 [Cardamine flexuosa]
          Length = 172

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = -3

Query: 267 KRSSLSFTSGQKQRKPHRFKPGTVALREIRHFQKSFKLLIPAAPFIRTVTSITTL 103
           KR+      G  Q+KP+R+KPGTVALREIRHFQKS  LLIPAA FIR V SIT +
Sbjct: 57  KRTRRDMPQGS-QKKPYRYKPGTVALREIRHFQKSTNLLIPAASFIRQVRSITQM 110


>dbj|BAF49723.1| centromeric histone H3-like protein-3 [Cardamine flexuosa]
          Length = 175

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = -3

Query: 267 KRSSLSFTSGQKQRKPHRFKPGTVALREIRHFQKSFKLLIPAAPFIRTVTSITTL 103
           KRS  +   G  Q KP+R++PGTVALREIRHFQKS  LLIPAA FIR V SIT +
Sbjct: 60  KRSRQAMPKGS-QNKPYRYRPGTVALREIRHFQKSTNLLIPAASFIRQVRSITQM 113


>dbj|BAF49717.1| putative centromeric histone H3-like protein_1 [Olimarabidopsis
           pumila]
          Length = 173

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/54 (62%), Positives = 43/54 (79%)
 Frame = -3

Query: 267 KRSSLSFTSGQKQRKPHRFKPGTVALREIRHFQKSFKLLIPAAPFIRTVTSITT 106
           KR+  +   G  Q+KP+R+KPGTVALREIRHFQK+  LL+PAAPFIR V SI++
Sbjct: 58  KRARQAMPRGS-QKKPYRYKPGTVALREIRHFQKTTSLLLPAAPFIRQVRSISS 110


>dbj|BAF49722.1| centromeric histone H3-like protein-2 [Cardamine flexuosa]
          Length = 175

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = -3

Query: 267 KRSSLSFTSGQKQRKPHRFKPGTVALREIRHFQKSFKLLIPAAPFIRTVTSITTL 103
           KRS  +   G  Q KP+R++PGTVALREIRHFQKS  LLIPAA FIR V SIT +
Sbjct: 60  KRSRQAMPKGS-QNKPYRYRPGTVALREIRHFQKSTNLLIPAATFIRQVRSITQM 113


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