BLASTX nr result

ID: Bupleurum21_contig00015811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015811
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531855.1| conserved hypothetical protein [Ricinus comm...   341   3e-91
ref|XP_002283688.1| PREDICTED: uncharacterized protein LOC100264...   330   7e-88
ref|XP_004148700.1| PREDICTED: uncharacterized protein LOC101214...   316   8e-84
ref|XP_002324063.1| predicted protein [Populus trichocarpa] gi|2...   315   1e-83
ref|XP_002306030.1| predicted protein [Populus trichocarpa] gi|2...   311   3e-82

>ref|XP_002531855.1| conserved hypothetical protein [Ricinus communis]
            gi|223528505|gb|EEF30533.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 321

 Score =  341 bits (874), Expect = 3e-91
 Identities = 175/314 (55%), Positives = 225/314 (71%), Gaps = 9/314 (2%)
 Frame = +3

Query: 291  NQFDIFMIYSKFCDIKARTSEKEDD-SRNDELQKIEYSKMALAQLFNLVESQFHPRVSII 467
            N  DIF IY ++CDI++  +   D   + D++Q+ + S+ ALAQL   VE + H R+SI+
Sbjct: 7    NWADIFEIYHRYCDIRSGKAYDTDRYEQEDDVQQGKTSRDALAQLLKFVELRVHTRISIV 66

Query: 468  DELFKLMTRLDFAVDYSEFSRFYSFVFFICRENGQKSITVSRAVAAWRLVLAGRFRLLNE 647
            DEL KLM++L+F VD+SEFSRFY FVFFICRENGQK+ITVS+AV AWRLVLAGRFRLLN+
Sbjct: 67   DELVKLMSKLEFMVDFSEFSRFYDFVFFICRENGQKNITVSKAVTAWRLVLAGRFRLLNQ 126

Query: 648  WCNFVENNRRHNISDDTWRQVLSFSRCVHENLEGYDPEGAWPVLIDEFVEHMYRLKGSND 827
            WC FV+ N+RHNIS+DTW+QVL+FSRCVHENLEGYDPEGAWPVLID+FVEHMYR+ GSN 
Sbjct: 127  WCEFVQENQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSNK 186

Query: 828  PPYLYCSCGDSDGQ--LSEDSLPGLKTFPGLKRKSSNLHEQVME-LDKNFASFNTCKKMH 998
                +C+CGDS+ Q  + ED LPGLK  PGLKRK   L ++ M+  D +   +     M 
Sbjct: 187  DSNFFCNCGDSESQSCVFEDPLPGLKVTPGLKRKLPILQDEEMDSSDYHLPDYADLNHMP 246

Query: 999  IDNADKIMTPAEYALLDTP-----NESMESTKQDNSAMRGAKSQCAVEGCLVKGFAQLFS 1163
                ++++ P   +  D P     ++ ME  KQ NS +   KS CAVEGCL KGFA LFS
Sbjct: 247  NSKRNRVIFPRPLSQEDNPPGNSSSDCMEIIKQ-NSPLGSTKSLCAVEGCLSKGFAGLFS 305

Query: 1164 TQSKMQLGQESKAS 1205
            T++ +QL +E + S
Sbjct: 306  TRTYLQLDRERRVS 319


>ref|XP_002283688.1| PREDICTED: uncharacterized protein LOC100264659 [Vitis vinifera]
            gi|296082930|emb|CBI22231.3| unnamed protein product
            [Vitis vinifera]
          Length = 324

 Score =  330 bits (845), Expect = 7e-88
 Identities = 172/316 (54%), Positives = 218/316 (68%), Gaps = 13/316 (4%)
 Frame = +3

Query: 297  FDIFMIYSKFCDI---KARTSEKEDDSRNDELQKIEYSKMALAQLFNLVESQFHPRVSII 467
            FD+F IY  +CDI    A    +E    ++ELQ+ ++ +  LAQL  LVES+ +  VSI 
Sbjct: 9    FDVFEIYRSYCDIISGNAYICVEEGCQGDEELQRAKFLREGLAQLLKLVESRVYTGVSIF 68

Query: 468  DELFKLMTRLDFAVDYSEFSRFYSFVFFICRENGQKSITVSRAVAAWRLVLAGRFRLLNE 647
            DEL +LM RLD  VD+SEFSRFY FVFF+CREN QK+ITVSRA+ AWR+ LAGRFRLLN+
Sbjct: 69   DELLRLMLRLDLTVDFSEFSRFYDFVFFMCRENSQKNITVSRAITAWRIALAGRFRLLNQ 128

Query: 648  WCNFVENNRRHNISDDTWRQVLSFSRCVHENLEGYDPEGAWPVLIDEFVEHMYRLKGSND 827
            WC+FVE N+RHNIS+DTWRQVL+FSRCVHENLEGYDPEGAWPVLID+FVEHMYR+ GS+D
Sbjct: 129  WCDFVEKNQRHNISEDTWRQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRIAGSDD 188

Query: 828  PPYLYCSCGDSDGQLSE--DSLPGLKTFPGLKRK---SSNLHEQVMELDKNFASFNTCKK 992
                +C+CGDS+GQ  E  DSLPGLK +PGLKRK    S  HE V+   +   S +   K
Sbjct: 189  NAKFFCNCGDSEGQSCEYDDSLPGLKFYPGLKRKLHEDSQRHELVLSDTRFRDSIDLNDK 248

Query: 993  MHIDNADKIMTPAEYALLDTP-----NESMESTKQDNSAMRGAKSQCAVEGCLVKGFAQL 1157
            ++   + + +        + P     ++ ME  K  +S +  +KS CAVEGCL KGFA L
Sbjct: 249  LNSKRSKQSLIAGRSVYSEHPPGAATDDCMEIVK--HSPLSSSKSPCAVEGCLSKGFAGL 306

Query: 1158 FSTQSKMQLGQESKAS 1205
            FST S +   +E + S
Sbjct: 307  FSTPSCLHFDRERRVS 322


>ref|XP_004148700.1| PREDICTED: uncharacterized protein LOC101214663 [Cucumis sativus]
            gi|449517217|ref|XP_004165642.1| PREDICTED:
            uncharacterized LOC101214663 [Cucumis sativus]
          Length = 324

 Score =  316 bits (810), Expect = 8e-84
 Identities = 174/325 (53%), Positives = 220/325 (67%), Gaps = 18/325 (5%)
 Frame = +3

Query: 291  NQFDIFMIYSKFCDIKARTS-EKEDDSRNDELQKIEYSKMALAQLFNLVESQFHPRVSII 467
            N+FDI  IY ++CDI+++      +DS N E Q  + SK ALA+L   V+S      S++
Sbjct: 11   NRFDIVQIYRQYCDIRSQNGYHGNEDSGNAETQMCKSSKQALAELLIYVQSSLQMGNSVV 70

Query: 468  DELFKLMTRLDFAVDYSEFSRFYSFVFFICRENGQKSITVSRAVAAWRLVLAGRFRLLNE 647
             EL KLM+ L+F VD+SEFSRFY FVFF+CRENGQK+ITVS AV AWRLVL GRFRLLN+
Sbjct: 71   YELSKLMSYLNFMVDFSEFSRFYEFVFFVCRENGQKNITVSMAVRAWRLVLDGRFRLLNQ 130

Query: 648  WCNFVENNRRHNISDDTWRQVLSFSRCVHENLEGYDPEGAWPVLIDEFVEHMYRLKGSND 827
            WC+FVENN+RHNIS+DTW+QVL+FSRCVHENLEGYDPEGAWPVLID+FVEHMYR  GSN 
Sbjct: 131  WCDFVENNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRRSGSNK 190

Query: 828  PPYLYCSCGDS-DGQLSEDSLPGLKTFPGLKRK------------SSNLHEQVMEL---- 956
               L C+CGDS +  + EDSL GLK FPGLKRK             S+     ME     
Sbjct: 191  VSKLSCNCGDSEESGVFEDSLSGLKFFPGLKRKLPEDMQMDGIVSPSDPRTSAMEFTPVT 250

Query: 957  DKNFASFNTCKKMHIDNADKIMTPAEYALLDTPNESMESTKQDNSAMRGAKSQCAVEGCL 1136
                + F  C+ ++++    I +P+      T  E++E  + +++   G+KS CAVEGCL
Sbjct: 251  SVKKSRFMACRPVNLE----INSPS-----CTAAENIEMVRHNSTV--GSKSPCAVEGCL 299

Query: 1137 VKGFAQLFSTQSKMQLGQESKASLS 1211
             KGFA LFST+  + L QE KAS +
Sbjct: 300  SKGFAGLFSTRLFLGLDQERKASFT 324


>ref|XP_002324063.1| predicted protein [Populus trichocarpa] gi|222867065|gb|EEF04196.1|
            predicted protein [Populus trichocarpa]
          Length = 299

 Score =  315 bits (808), Expect = 1e-83
 Identities = 165/310 (53%), Positives = 223/310 (71%), Gaps = 3/310 (0%)
 Frame = +3

Query: 285  MDNQFDIFMIYSKFCDIKARTSEKEDDSRNDELQKIEYSKMALAQLFNLVESQFHPRVSI 464
            M +   IF IY ++CDI++  S + ++   DE +K + S+ +LAQL   V+ +FH R+ I
Sbjct: 1    MHSPDSIFEIYRRYCDIRSVKSCQVNEP--DETRKGKSSRDSLAQLLKFVDLKFHSRIKI 58

Query: 465  IDELFKLMTRLDFAVDYSEFSRFYSFVFFICRENGQKSITVSRAVAAWRLVLAGRFRLLN 644
             DEL KLM++L+   D+SEFSRFY FVFF+CRENGQ++ITV++AV+AW+LVLAGRFRLLN
Sbjct: 59   FDELLKLMSKLELMADFSEFSRFYDFVFFMCRENGQRNITVNKAVSAWKLVLAGRFRLLN 118

Query: 645  EWCNFVENNRRHNISDDTWRQVLSFSRCVHENLEGYDPEGAWPVLIDEFVEHMYRLKGSN 824
            +WC+F E N+RHNIS+DTW+QVL+FSRCVHENLEGYDPEGAWPVLID+FVEHMYR+ GSN
Sbjct: 119  QWCDFQE-NQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRILGSN 177

Query: 825  DPPYLYCSCGDSDGQ--LSEDSLPGLKTFPGLKRKSSNLHEQVMELDKNFASF-NTCKKM 995
              P  +C+CGDS+ +    ED LPGLK  PGLKRK  +  ++  E+D + A F ++ +  
Sbjct: 178  KEPNFFCNCGDSESRPCTFEDPLPGLKVAPGLKRKLPSFQDE--EMDCSDALFPDSTRPN 235

Query: 996  HIDNADKIMTPAEYALLDTPNESMESTKQDNSAMRGAKSQCAVEGCLVKGFAQLFSTQSK 1175
            HI N+             T ++ M+  K +NS M   KS CAVEGCL +GFA +FST+S 
Sbjct: 236  HILNS------------KTTSDCMDINKLNNS-MGSTKSPCAVEGCLSRGFAVVFSTRSC 282

Query: 1176 MQLGQESKAS 1205
            +QL ++ + S
Sbjct: 283  LQLDRDRRVS 292


>ref|XP_002306030.1| predicted protein [Populus trichocarpa] gi|222848994|gb|EEE86541.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  311 bits (796), Expect = 3e-82
 Identities = 172/328 (52%), Positives = 221/328 (67%), Gaps = 21/328 (6%)
 Frame = +3

Query: 285  MDNQFDIFMIYSKFCDIKARTSEKEDDSRNDELQKIEYSKMALAQLFNLVESQFHPRVSI 464
            MD+   IF IY ++ DI++  S + D     E +    S+ ALAQL  +V+ +FH R SI
Sbjct: 1    MDSPGSIFEIYIRYHDIRSLKSCQTDGHDEHEGKT---SRDALAQLSKIVDLKFHSRTSI 57

Query: 465  IDELFKLMTRLDFAVDYSEFSRFYSFVFFICRENGQKSITVSRAVAAWRLVLAGRFRLLN 644
             DEL KLM++L+   D+SEFSRFY FVFF+CRENGQK+ITV++AV AW+L+LAGRFRLLN
Sbjct: 58   FDELLKLMSKLELMADFSEFSRFYDFVFFMCRENGQKNITVNKAVTAWKLILAGRFRLLN 117

Query: 645  EWCNFVENNRRHNISDDTWRQVLSFSRCVHENLEGYDPE-----------GAWPVLIDEF 791
            +WC+FV+ N+RHNIS+DTW+QVL+FSRCVHENLEGYDPE           GAWPVLID+F
Sbjct: 118  QWCDFVQENQRHNISEDTWQQVLAFSRCVHENLEGYDPEEQCLLVCFLFAGAWPVLIDDF 177

Query: 792  VEHMYRLKGSNDPPYLYCSCGDSDGQ--LSEDSLPGLKTFPGLKRKSSNLHEQVMELDKN 965
            VEHMYR+ GSN  P  +C+CGDS+ Q    ED LPGLK  PGLKRK S+   Q+ E+  +
Sbjct: 178  VEHMYRVLGSNREPNFFCNCGDSESQSCTFEDPLPGLKDTPGLKRKLSSF--QMEEMASS 235

Query: 966  FASFNTCKKMHIDNADKIMTPAEYALL---DTP-----NESMESTKQDNSAMRGAKSQCA 1121
             A F      +     K     +Y  L   D P     ++ M+ TKQ+NS +   KS CA
Sbjct: 236  NAVFLDSVSPNFILNSKRSRLIDYRPLNWEDNPPGNSASDGMDITKQNNS-LGSMKSPCA 294

Query: 1122 VEGCLVKGFAQLFSTQSKMQLGQESKAS 1205
            VEGCL +GFA LFST+S +QL +E + S
Sbjct: 295  VEGCLSRGFAGLFSTRSYLQLDRERRVS 322


Top