BLASTX nr result
ID: Bupleurum21_contig00015779
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00015779
(863 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15512.3| unnamed protein product [Vitis vinifera] 157 3e-36
emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera] 157 4e-36
ref|XP_002521455.1| pentatricopeptide repeat-containing protein,... 156 5e-36
ref|XP_002324003.1| predicted protein [Populus trichocarpa] gi|2... 152 7e-35
ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containi... 149 8e-34
>emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 157 bits (397), Expect = 3e-36
Identities = 79/170 (46%), Positives = 115/170 (67%), Gaps = 8/170 (4%)
Frame = -2
Query: 862 SIDDHETIVKVLNEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRN 683
S D H+ +++ NE+I C+CD + EAL LK EMV+K IKP+L TYRA+I CL RLSR+
Sbjct: 460 SKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRS 519
Query: 682 AEGEFMMRKMMEYDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVI 503
EGE ++ +M+ +LPD+EI RAL G+C E ++ KAE+LLSFFA E ++ DTE +N +
Sbjct: 520 MEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNAL 579
Query: 502 LKVLSEYGEMDNLMEIQDRMLKLGISPN--------VTTFRLMIDALSRN 377
+++ S G++ +EIQD MLK+G+ PN + T RL +D + N
Sbjct: 580 IRITSAKGDIARSLEIQDMMLKMGLLPNPLTCNPFAILTSRLRVDVKAAN 629
Score = 66.2 bits (160), Expect = 9e-09
Identities = 40/149 (26%), Positives = 66/149 (44%)
Frame = -2
Query: 826 NEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMME 647
N + H LCK + +M +G P +VTY +I CR R + ++ + M
Sbjct: 262 NILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYR 321
Query: 646 YDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYGEMDN 467
V+PD+ AL+NG C EG V +A L D YN ++ + G+M
Sbjct: 322 RGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQE 381
Query: 466 LMEIQDRMLKLGISPNVTTFRLMIDALSR 380
+ M+ GISP+ T ++++ +
Sbjct: 382 SRSLLHDMIWNGISPDSFTCWVLVEGYGK 410
Score = 61.2 bits (147), Expect = 3e-07
Identities = 36/144 (25%), Positives = 65/144 (45%)
Frame = -2
Query: 826 NEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMME 647
N +++ L K +Y + + EM GI P+L T+ + LC+ + + KM E
Sbjct: 227 NYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEE 286
Query: 646 YDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYGEMDN 467
PDI L+N +C +G + A L + D Y ++ L + G +
Sbjct: 287 EGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVRE 346
Query: 466 LMEIQDRMLKLGISPNVTTFRLMI 395
++ RM+ G+SP++ T+ +I
Sbjct: 347 AHQLFHRMVHRGLSPDIVTYNTLI 370
Score = 60.5 bits (145), Expect = 5e-07
Identities = 36/149 (24%), Positives = 74/149 (49%)
Frame = -2
Query: 826 NEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMME 647
N +I+ C+ +++A L M +G+ P LV+Y A++ LC+ R E + +M+
Sbjct: 297 NTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVH 356
Query: 646 YDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYGEMDN 467
+ PDI L++G+C EG + ++ +LL D+ V+++ + G+ +
Sbjct: 357 RGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLS 416
Query: 466 LMEIQDRMLKLGISPNVTTFRLMIDALSR 380
+ + + + G+S + + +I AL R
Sbjct: 417 ALNLVVELQRFGVSISQDIYSYLIVALCR 445
>emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 157 bits (396), Expect = 4e-36
Identities = 76/159 (47%), Positives = 111/159 (69%)
Frame = -2
Query: 862 SIDDHETIVKVLNEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRN 683
S D H+ +++ NE+I C+CD + EAL LK EMV+K IKP+L TYRA++ CL RLSR+
Sbjct: 505 SQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRS 564
Query: 682 AEGEFMMRKMMEYDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVI 503
EGE ++ +M+ LPD+EI RAL G+C E ++ KAE+LLSF A E ++ DTE +N +
Sbjct: 565 MEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNAL 624
Query: 502 LKVLSEYGEMDNLMEIQDRMLKLGISPNVTTFRLMIDAL 386
+++ S G++ +EIQD MLK+G+ PN T + +ID L
Sbjct: 625 IRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGL 663
Score = 66.2 bits (160), Expect = 9e-09
Identities = 40/149 (26%), Positives = 66/149 (44%)
Frame = -2
Query: 826 NEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMME 647
N + H LCK + +M +G P +VTY +I CR R + ++ + M
Sbjct: 307 NILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYR 366
Query: 646 YDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYGEMDN 467
V+PD+ AL+NG C EG V +A L D YN ++ + G+M
Sbjct: 367 RGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQE 426
Query: 466 LMEIQDRMLKLGISPNVTTFRLMIDALSR 380
+ M+ GISP+ T ++++ +
Sbjct: 427 SRSLLHDMIWNGISPDSFTCWVLVEGYGK 455
Score = 61.2 bits (147), Expect = 3e-07
Identities = 36/144 (25%), Positives = 65/144 (45%)
Frame = -2
Query: 826 NEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMME 647
N +++ L K +Y + + EM GI P+L T+ + LC+ + + KM E
Sbjct: 272 NYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEE 331
Query: 646 YDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYGEMDN 467
PDI L+N +C +G + A L + D Y ++ L + G +
Sbjct: 332 EGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVRE 391
Query: 466 LMEIQDRMLKLGISPNVTTFRLMI 395
++ RM+ G+SP++ T+ +I
Sbjct: 392 AHQLFHRMVHRGLSPDIVTYNTLI 415
Score = 60.5 bits (145), Expect = 5e-07
Identities = 36/149 (24%), Positives = 74/149 (49%)
Frame = -2
Query: 826 NEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMME 647
N +I+ C+ +++A L M +G+ P LV+Y A++ LC+ R E + +M+
Sbjct: 342 NTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVH 401
Query: 646 YDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYGEMDN 467
+ PDI L++G+C EG + ++ +LL D+ V+++ + G+ +
Sbjct: 402 RGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLS 461
Query: 466 LMEIQDRMLKLGISPNVTTFRLMIDALSR 380
+ + + + G+S + + +I AL R
Sbjct: 462 ALNLVVELQRFGVSISQDIYSYLIVALCR 490
>ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539354|gb|EEF40945.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 623
Score = 156 bits (395), Expect = 5e-36
Identities = 73/151 (48%), Positives = 108/151 (71%)
Frame = -2
Query: 838 VKVLNEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMR 659
V++ N++I LCK D + +AL +K+EM ++ IKPS +TY+A+ICCLCR SR+ E E +M
Sbjct: 459 VEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLME 518
Query: 658 KMMEYDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYG 479
+M++ +LPD +I RAL++ +C E ++ KAE LL FA E ++FD+E YN ++K E
Sbjct: 519 EMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDA 578
Query: 478 EMDNLMEIQDRMLKLGISPNVTTFRLMIDAL 386
+ LME+QDRMLK+G +PN+ TFR MI L
Sbjct: 579 DATRLMELQDRMLKVGFAPNIQTFRQMIHGL 609
Score = 72.4 bits (176), Expect = 1e-10
Identities = 41/145 (28%), Positives = 68/145 (46%)
Frame = -2
Query: 826 NEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMME 647
N + H C+ V++ M +G +P +VTY +I C CR R + ++ R M
Sbjct: 253 NILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYR 312
Query: 646 YDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYGEMDN 467
+VLPD+ AL+NG C EG V +A L D +N ++ + G+M
Sbjct: 313 RNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRE 372
Query: 466 LMEIQDRMLKLGISPNVTTFRLMID 392
+ M+ GI P+ T +++I+
Sbjct: 373 SRSLLHEMIGSGICPDKVTCQVLIE 397
Score = 62.4 bits (150), Expect = 1e-07
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Frame = -2
Query: 820 IIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMMEYD 641
+++ LCK V EA L M+++G+ P +V++ +IC C+ + E ++ +M+
Sbjct: 325 LMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSG 384
Query: 640 VLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMF----DTECYNVILKVLSEYGEM 473
+ PD + L+ G+ E + A L+ VEL F T+ Y+ ++ + E G
Sbjct: 385 ICPDKVTCQVLIEGYRKEARIVSALNLV----VELERFGVPISTDIYDYLMVSICEEGRP 440
Query: 472 DNLMEIQDRMLKLGISPNVTTFRLMIDALSRNTS 371
+ R+ + G P V + +I++L ++ S
Sbjct: 441 FAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDS 474
>ref|XP_002324003.1| predicted protein [Populus trichocarpa] gi|222867005|gb|EEF04136.1|
predicted protein [Populus trichocarpa]
Length = 626
Score = 152 bits (385), Expect = 7e-35
Identities = 72/160 (45%), Positives = 113/160 (70%)
Frame = -2
Query: 838 VKVLNEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMR 659
V++ N++I LCK D V +ALSLKAE+V I P+L+TY+A+I CLCR+ R+ E E +M
Sbjct: 462 VEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLME 521
Query: 658 KMMEYDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYG 479
+M+ + + PD EI RA+++G+C E + KAE+LL FA E ++FD+E Y+ +++++ E G
Sbjct: 522 EMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDG 581
Query: 478 EMDNLMEIQDRMLKLGISPNVTTFRLMIDALSRNTSSNKK 359
++ ME+Q+RMLK+G +PN T + MID L +N K+
Sbjct: 582 DVAKFMELQERMLKVGFAPNSLTCKYMIDGLRKNVGLVKE 621
Score = 66.6 bits (161), Expect = 7e-09
Identities = 42/144 (29%), Positives = 67/144 (46%)
Frame = -2
Query: 826 NEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMME 647
N + H CK +++ +M +G +P +VTY +I C R ++ ++ R M
Sbjct: 256 NILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYR 315
Query: 646 YDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYGEMDN 467
VLPD+ AL+NG C EG V +A LL D YN ++ + G+M
Sbjct: 316 RCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLE 375
Query: 466 LMEIQDRMLKLGISPNVTTFRLMI 395
+ M+ GI P+ T R++I
Sbjct: 376 SKSLLYEMIGNGIFPDSFTCRVLI 399
Score = 62.4 bits (150), Expect = 1e-07
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Frame = -2
Query: 820 IIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMMEYD 641
+++ LCK V EA L MV++G+ P +V+Y +IC C+ + E + ++ +M+
Sbjct: 328 LMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNG 387
Query: 640 VLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMF----DTECYNVILKVLSEYGEM 473
+ PD R L+ G+ EG + A L+ VEL F + Y+ ++ L E
Sbjct: 388 IFPDSFTCRVLIQGYRKEGWLISALNLV----VELEKFGVSISPDIYDYLVASLCEEDRP 443
Query: 472 DNLMEIQDRMLKLGISPNVTTFRLMIDALSR 380
+ +RM + G P+V + +I++L +
Sbjct: 444 FAAKTLLERMSQRGYIPHVEIYNKLIESLCK 474
>ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 149 bits (376), Expect = 8e-34
Identities = 71/158 (44%), Positives = 107/158 (67%)
Frame = -2
Query: 832 VLNEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKM 653
+ N++I C+ + V EAL LK EM+N+ KP+ TY+++I C+C ++R+ +GE +M +M
Sbjct: 472 IYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEM 531
Query: 652 MEYDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYGEM 473
+E +V+PD EI RALVNG+C EGN KAE+LL FA + + FD+E +N ++KV + G
Sbjct: 532 VESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVGNE 591
Query: 472 DNLMEIQDRMLKLGISPNVTTFRLMIDALSRNTSSNKK 359
LME+QDRMLK G PN T R +I + ++ NK+
Sbjct: 592 TKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNKQ 629
Score = 58.9 bits (141), Expect = 1e-06
Identities = 35/154 (22%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Frame = -2
Query: 838 VKVLNEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMR 659
V N +I + +E+A L M +G+ P LV+Y +++ LCRL R E +
Sbjct: 295 VVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFH 354
Query: 658 KMMEYDVLPDIEILRALVNGFCAEGNVHKAEALL-SFFAVELRMFDTECYNVILKVLSEY 482
+M++ + PD+ + L+ +C +G + +A +LL + + C ++++
Sbjct: 355 RMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTC-RILVEGYGRE 413
Query: 481 GEMDNLMEIQDRMLKLGISPNVTTFRLMIDALSR 380
G + + + + + KLG++ ++ +I +L R
Sbjct: 414 GRLISALNLVVEIQKLGVTVAHDIYKYLIISLCR 447
Score = 58.5 bits (140), Expect = 2e-06
Identities = 35/149 (23%), Positives = 64/149 (42%)
Frame = -2
Query: 826 NEIIHCLCKCDYVEEALSLKAEMVNKGIKPSLVTYRAIICCLCRLSRNAEGEFMMRKMME 647
N + + LC+ V + +M +G P +VTY +I R R + ++ + M
Sbjct: 264 NILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYR 323
Query: 646 YDVLPDIEILRALVNGFCAEGNVHKAEALLSFFAVELRMFDTECYNVILKVLSEYGEMDN 467
V+PD+ +L+ G C G V +A L D YN ++ + G +
Sbjct: 324 RGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQE 383
Query: 466 LMEIQDRMLKLGISPNVTTFRLMIDALSR 380
+ M+ +GI P+ T R++++ R
Sbjct: 384 ARSLLHEMIGIGIHPDSFTCRILVEGYGR 412