BLASTX nr result

ID: Bupleurum21_contig00015745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015745
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304474.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
ref|XP_002283259.1| PREDICTED: inactive rhomboid protein 1 isofo...   382   e-104
ref|XP_002298056.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101
ref|XP_004159491.1| PREDICTED: inactive rhomboid protein 1-like ...   360   3e-97
ref|XP_004147969.1| PREDICTED: inactive rhomboid protein 1-like ...   360   3e-97

>ref|XP_002304474.1| predicted protein [Populus trichocarpa] gi|222841906|gb|EEE79453.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  384 bits (986), Expect = e-104
 Identities = 184/292 (63%), Positives = 212/292 (72%)
 Frame = -3

Query: 1168 ETQWTSWLVPLIVVGNVAMFIVVMYINDCPKKNSGVRGDCVAKFLRRFSFQPLKENPLFG 989
            E QWTSW++P+ VV N+A+FIVVMY+NDCPKK+ G+ G CVAKFL RFSFQPLKENPLFG
Sbjct: 28   EKQWTSWIIPMFVVANIAVFIVVMYVNDCPKKSLGIEGSCVAKFLGRFSFQPLKENPLFG 87

Query: 988  PSSSALEKLGALEWDKVVHGHQAWRLFTCVWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 809
            PS++ LEK+GALEW+KVVHGHQ WRL TC+WLHAGV+H+LANMLSL+FIGIRLEQQFGFV
Sbjct: 88   PSAATLEKMGALEWNKVVHGHQGWRLITCMWLHAGVVHVLANMLSLIFIGIRLEQQFGFV 147

Query: 808  RVGAIYLLSGFGGSILSALFLQRYIXXXXXXXXXXXXXXXXSELLTNWTIYANKXXXXXX 629
            RVG IYL+SGFGGSILS+LF+Q+ I                SELLTNWTIY+NK      
Sbjct: 148  RVGIIYLVSGFGGSILSSLFIQQNISVGASGALFGLLGAMLSELLTNWTIYSNKIAALLT 207

Query: 628  XXXXXXXXXXXXXLPHVDNFAHIXXXXXXXXXXXXXLIRPQFGWLESQHLPSDARVTSKH 449
                         LPHVDNFAHI             L+RPQFGW E++H P+DARV SKH
Sbjct: 208  LVVIIAINLAVGILPHVDNFAHIGGFMSGFLLGFVFLLRPQFGWAENRHSPADARVKSKH 267

Query: 448  TMYQXXXXXXXXXXXXVGFTVGLVMLFKGENGNDHCSWCHNLSCLRTSRWNC 293
              YQ            VGFT+ LVMLFKGENGNDHCSWCH LSC+ TS+WNC
Sbjct: 268  KAYQYVLMLAAAVLLIVGFTLALVMLFKGENGNDHCSWCHYLSCVPTSKWNC 319


>ref|XP_002283259.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
            gi|297742575|emb|CBI34724.3| unnamed protein product
            [Vitis vinifera]
          Length = 328

 Score =  382 bits (982), Expect = e-104
 Identities = 185/293 (63%), Positives = 211/293 (72%)
 Frame = -3

Query: 1168 ETQWTSWLVPLIVVGNVAMFIVVMYINDCPKKNSGVRGDCVAKFLRRFSFQPLKENPLFG 989
            ET WTSWL+P+ VV NVA+F+VVMY+NDCPKKN+G+ G CVAKFLRR SFQPL+ENPLFG
Sbjct: 35   ETHWTSWLIPMFVVANVAVFVVVMYVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFG 94

Query: 988  PSSSALEKLGALEWDKVVHGHQAWRLFTCVWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 809
            PSSS LEKLG LEW+KVV+G Q WRL TC+WLHAGVIHLLANMLSLVFIGIRLEQQFGFV
Sbjct: 95   PSSSTLEKLGGLEWNKVVYGDQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 154

Query: 808  RVGAIYLLSGFGGSILSALFLQRYIXXXXXXXXXXXXXXXXSELLTNWTIYANKXXXXXX 629
            R+G IYL+SGFGGSILS+LF+Q  I                SEL+TNW+IY NK      
Sbjct: 155  RIGIIYLVSGFGGSILSSLFIQHNISVGASGALFGLLGAMLSELITNWSIYTNKAAALFT 214

Query: 628  XXXXXXXXXXXXXLPHVDNFAHIXXXXXXXXXXXXXLIRPQFGWLESQHLPSDARVTSKH 449
                         LPHVDNFAHI             L+RPQFGW++ QH P+DARV SKH
Sbjct: 215  LVVIIAINLAVGILPHVDNFAHIGGFLTGFLLGFMLLLRPQFGWVKRQHRPADARVKSKH 274

Query: 448  TMYQXXXXXXXXXXXXVGFTVGLVMLFKGENGNDHCSWCHNLSCLRTSRWNCN 290
             +YQ            VGFTVGLVMLF+GENGNDHCSWCH LSC+ TS+W C+
Sbjct: 275  KVYQYAFWLVAMALLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCD 327


>ref|XP_002298056.1| predicted protein [Populus trichocarpa] gi|222845314|gb|EEE82861.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  373 bits (958), Expect = e-101
 Identities = 184/292 (63%), Positives = 204/292 (69%)
 Frame = -3

Query: 1168 ETQWTSWLVPLIVVGNVAMFIVVMYINDCPKKNSGVRGDCVAKFLRRFSFQPLKENPLFG 989
            E QWTSWL+P+ VV N+ +FIVVMY+NDCPKKN G    CVAKFL RFSFQPLKENPLFG
Sbjct: 28   EKQWTSWLIPMFVVANIVVFIVVMYVNDCPKKNLGSERSCVAKFLGRFSFQPLKENPLFG 87

Query: 988  PSSSALEKLGALEWDKVVHGHQAWRLFTCVWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 809
            PSS+ LEK+GALEW+K+V G Q WRL TC+WLHAGVIH+LANMLSLVFIGIRLEQQFGFV
Sbjct: 88   PSSATLEKMGALEWNKIVRGDQGWRLITCMWLHAGVIHVLANMLSLVFIGIRLEQQFGFV 147

Query: 808  RVGAIYLLSGFGGSILSALFLQRYIXXXXXXXXXXXXXXXXSELLTNWTIYANKXXXXXX 629
            RVG IYL+SGFGGSI S+LF+QR I                SELLTNWTIY+NK      
Sbjct: 148  RVGLIYLVSGFGGSIFSSLFIQRNISVGASGALFGLLGAMLSELLTNWTIYSNKIAALLT 207

Query: 628  XXXXXXXXXXXXXLPHVDNFAHIXXXXXXXXXXXXXLIRPQFGWLESQHLPSDARVTSKH 449
                         LPHVDNFAHI             L+RPQFGW+ESQH  +DA V SKH
Sbjct: 208  LMVIIAINLAVGILPHVDNFAHIGGFFTGFLLGFVLLLRPQFGWVESQHFRADAHVKSKH 267

Query: 448  TMYQXXXXXXXXXXXXVGFTVGLVMLFKGENGNDHCSWCHNLSCLRTSRWNC 293
              YQ            VGFT GLVMLFKGENGNDHCSWCH LSC+ TS+W C
Sbjct: 268  KAYQYMFLLAAAVLLIVGFTFGLVMLFKGENGNDHCSWCHYLSCVPTSKWKC 319


>ref|XP_004159491.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
          Length = 322

 Score =  360 bits (925), Expect = 3e-97
 Identities = 177/292 (60%), Positives = 206/292 (70%)
 Frame = -3

Query: 1168 ETQWTSWLVPLIVVGNVAMFIVVMYINDCPKKNSGVRGDCVAKFLRRFSFQPLKENPLFG 989
            E QWTSWLVP+ VV NVAMFIVVMY+N+CPK + G   +CVA+FL RFSF+PL+ NPLFG
Sbjct: 30   EKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHSLGSE-ECVARFLGRFSFEPLRVNPLFG 88

Query: 988  PSSSALEKLGALEWDKVVHGHQAWRLFTCVWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 809
            PSSS L+KLGALEW+K+VHGHQAWRL T +WLHAGVIHLLANMLSLVFIGIRLEQQFGF+
Sbjct: 89   PSSSTLQKLGALEWEKIVHGHQAWRLITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFI 148

Query: 808  RVGAIYLLSGFGGSILSALFLQRYIXXXXXXXXXXXXXXXXSELLTNWTIYANKXXXXXX 629
            RVG +YLLSG GGSILS+LF+Q  I                SELLTNWTIY +K      
Sbjct: 149  RVGILYLLSGLGGSILSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTDKAAALIT 208

Query: 628  XXXXXXXXXXXXXLPHVDNFAHIXXXXXXXXXXXXXLIRPQFGWLESQHLPSDARVTSKH 449
                         LPHVDNFAHI             L+RPQFGW+E +HLP+++R   KH
Sbjct: 209  LIVIIVINLAVGILPHVDNFAHIGGFLTGFLLGFILLLRPQFGWIERRHLPANSRAVPKH 268

Query: 448  TMYQXXXXXXXXXXXXVGFTVGLVMLFKGENGNDHCSWCHNLSCLRTSRWNC 293
             +YQ            VGFT+GLVMLF+GENGN+HCSWCH LSC+ TS+W C
Sbjct: 269  KLYQYILCFVALALLIVGFTIGLVMLFRGENGNNHCSWCHYLSCVPTSKWEC 320


>ref|XP_004147969.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
          Length = 322

 Score =  360 bits (925), Expect = 3e-97
 Identities = 177/292 (60%), Positives = 206/292 (70%)
 Frame = -3

Query: 1168 ETQWTSWLVPLIVVGNVAMFIVVMYINDCPKKNSGVRGDCVAKFLRRFSFQPLKENPLFG 989
            E QWTSWLVP+ VV NVAMFIVVMY+N+CPK + G   +CVA+FL RFSF+PL+ NPLFG
Sbjct: 30   EKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHSLGSE-ECVARFLGRFSFEPLRVNPLFG 88

Query: 988  PSSSALEKLGALEWDKVVHGHQAWRLFTCVWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 809
            PSSS L+KLGALEW+K+VHGHQAWRL T +WLHAGVIHLLANMLSLVFIGIRLEQQFGF+
Sbjct: 89   PSSSTLQKLGALEWEKIVHGHQAWRLITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFI 148

Query: 808  RVGAIYLLSGFGGSILSALFLQRYIXXXXXXXXXXXXXXXXSELLTNWTIYANKXXXXXX 629
            RVG +YLLSG GGSILS+LF+Q  I                SELLTNWTIY +K      
Sbjct: 149  RVGILYLLSGLGGSILSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTDKAAALIT 208

Query: 628  XXXXXXXXXXXXXLPHVDNFAHIXXXXXXXXXXXXXLIRPQFGWLESQHLPSDARVTSKH 449
                         LPHVDNFAHI             L+RPQFGW+E +HLP+++R   KH
Sbjct: 209  LIVIIVINLAVGILPHVDNFAHIGGFLTGFLLGFILLLRPQFGWIERRHLPANSRAVPKH 268

Query: 448  TMYQXXXXXXXXXXXXVGFTVGLVMLFKGENGNDHCSWCHNLSCLRTSRWNC 293
             +YQ            VGFT+GLVMLF+GENGN+HCSWCH LSC+ TS+W C
Sbjct: 269  KLYQYILCFVALALLIVGFTIGLVMLFRGENGNNHCSWCHYLSCVPTSKWEC 320


Top