BLASTX nr result

ID: Bupleurum21_contig00015719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015719
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315940.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-41
gb|ABK95116.1| unknown [Populus trichocarpa]                          167   2e-39
ref|XP_002311458.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38
ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   164   1e-38
ref|XP_002531628.1| conserved hypothetical protein [Ricinus comm...   160   2e-37

>ref|XP_002315940.1| predicted protein [Populus trichocarpa] gi|222864980|gb|EEF02111.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  174 bits (440), Expect = 1e-41
 Identities = 95/149 (63%), Positives = 109/149 (73%), Gaps = 10/149 (6%)
 Frame = +2

Query: 179 MISMKKLAGAVGGKTARACDSCIKKRARWYCAADDAFLCQACDSSVHSANLLARRHERVR 358
           MI  K LA AVGG+TARACDSCIKKRA WYCAADDAFLCQACDSSVHSANLLARRHERVR
Sbjct: 1   MICNKSLANAVGGRTARACDSCIKKRASWYCAADDAFLCQACDSSVHSANLLARRHERVR 60

Query: 359 LKTASTEPA-ASSVE---PLWHRGFKTKPRTPR------KSKLKSVEKNLIHLVVPEMGQ 508
           LK+AS + + A S E   P WH GF  K RTPR      +SK++   +N+   +VPE+G 
Sbjct: 61  LKSASLKSSDAGSKENSMPSWHGGFTRKARTPRHGKPVSRSKIEETTRNIPIPLVPEVGS 120

Query: 509 DENYLEANDEHEQLLYQVPILETFADHLC 595
           DE  LE N+E E LLY+VPI + FA  LC
Sbjct: 121 DEISLEDNEE-EHLLYRVPIFDPFAAELC 148


>gb|ABK95116.1| unknown [Populus trichocarpa]
          Length = 444

 Score =  167 bits (422), Expect = 2e-39
 Identities = 91/149 (61%), Positives = 104/149 (69%), Gaps = 10/149 (6%)
 Frame = +2

Query: 179 MISMKKLAGAVGGKTARACDSCIKKRARWYCAADDAFLCQACDSSVHSANLLARRHERVR 358
           MI +K  A AVGGKTARACDSCIKKRARWYCAADDAFLCQACDSSVHSAN LARRHERVR
Sbjct: 1   MICIKSSANAVGGKTARACDSCIKKRARWYCAADDAFLCQACDSSVHSANPLARRHERVR 60

Query: 359 LKTASTEP----AASSVEPLWHRGFKTKPRTPR------KSKLKSVEKNLIHLVVPEMGQ 508
           LKTAS +     +  +  P WH GF  K RTPR      +SK+    +N+   +VPE+G 
Sbjct: 61  LKTASLKSLDLCSKENSVPSWHGGFTRKARTPRHGKPVSQSKIAETIRNIPIPLVPEVGS 120

Query: 509 DENYLEANDEHEQLLYQVPILETFADHLC 595
           DE   E N+E E LLY+VPI + F   LC
Sbjct: 121 DEISHEDNEE-EHLLYRVPIFDPFVADLC 148


>ref|XP_002311458.1| predicted protein [Populus trichocarpa] gi|222851278|gb|EEE88825.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  164 bits (414), Expect = 1e-38
 Identities = 89/146 (60%), Positives = 102/146 (69%), Gaps = 10/146 (6%)
 Frame = +2

Query: 188 MKKLAGAVGGKTARACDSCIKKRARWYCAADDAFLCQACDSSVHSANLLARRHERVRLKT 367
           +K  A AVGGKTARACDSCIKKRARWYCAADDAFLCQACDSSVHSAN LARRHERVRLKT
Sbjct: 1   IKSSANAVGGKTARACDSCIKKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKT 60

Query: 368 ASTEP----AASSVEPLWHRGFKTKPRTPR------KSKLKSVEKNLIHLVVPEMGQDEN 517
           AS +     +  +  P WH GF  K RTPR      +SK+    +N+   +VPE+G DE 
Sbjct: 61  ASLKSLDLCSKENSVPSWHGGFTRKARTPRHGKPVSQSKIAETIRNIPIPLVPEVGSDEI 120

Query: 518 YLEANDEHEQLLYQVPILETFADHLC 595
             E N+E E LLY+VPI + F   LC
Sbjct: 121 SHEDNEE-EHLLYRVPIFDPFVADLC 145


>ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
           gi|297737819|emb|CBI27020.3| unnamed protein product
           [Vitis vinifera]
          Length = 432

 Score =  164 bits (414), Expect = 1e-38
 Identities = 94/150 (62%), Positives = 104/150 (69%), Gaps = 11/150 (7%)
 Frame = +2

Query: 179 MISMKKLAGAVGGKTARACDSCIKKRARWYCAADDAFLCQACDSSVHSANLLARRHERVR 358
           MIS K +A AVGGKTARACDSCI+KRAR+YCAADDAFLCQACD SVHSAN LARRHERVR
Sbjct: 1   MISEKNVANAVGGKTARACDSCIRKRARFYCAADDAFLCQACDMSVHSANPLARRHERVR 60

Query: 359 LKTASTE-PAASSVE---PLWHRGFKTKPRTPRKSK------LKSVEKNLIHL-VVPEMG 505
           LKTAS + P A S+E   P WH+GF  K RTPR  K       KS E     L  VPE+G
Sbjct: 61  LKTASLKLPGADSLENSMPSWHQGFTRKARTPRHGKPAAHPAFKSDELTRNPLPFVPEIG 120

Query: 506 QDENYLEANDEHEQLLYQVPILETFADHLC 595
            DE     +D  EQLLY+VPI + F   LC
Sbjct: 121 ADET--SYDDNEEQLLYRVPIFDPFVAELC 148


>ref|XP_002531628.1| conserved hypothetical protein [Ricinus communis]
           gi|223528746|gb|EEF30756.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 468

 Score =  160 bits (404), Expect = 2e-37
 Identities = 90/157 (57%), Positives = 105/157 (66%), Gaps = 18/157 (11%)
 Frame = +2

Query: 179 MISMKKLAGAVGGKTARACDSCIKKRARWYCAADDAFLCQACDSSVHSANLLARRHERVR 358
           MIS K +A AV GKTARACDSC++KRARWYCAADDAFLCQ+CDSSVHSAN LARRHERVR
Sbjct: 1   MISNKNVANAVAGKTARACDSCVRKRARWYCAADDAFLCQSCDSSVHSANPLARRHERVR 60

Query: 359 LKTASTE-----PAASSV--EPLWHRGFKTKPRTPRKS----------KLKSVEKNLIHL 487
           LK +S +        SSV   P WH+GF  K RTPR            K++   +N I L
Sbjct: 61  LKISSLKSLDIISKGSSVITVPSWHQGFTRKARTPRNGHGNKPLLSLLKIEEKSRNPIPL 120

Query: 488 VVPEMGQDENYL-EANDEHEQLLYQVPILETFADHLC 595
            VPE+G D+    E N+E EQLLY+VPI + F   LC
Sbjct: 121 -VPEVGSDDQISHEDNNEEEQLLYRVPIFDPFVAELC 156


Top