BLASTX nr result

ID: Bupleurum21_contig00015648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015648
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis...   357   1e-96
ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyr...   355   3e-96
ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana] ...   355   4e-96
ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [...   353   1e-95
ref|XP_002526048.1| protein with unknown function [Ricinus commu...   353   1e-95

>ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
           gi|296087576|emb|CBI34832.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  357 bits (916), Expect = 1e-96
 Identities = 174/189 (92%), Positives = 187/189 (98%)
 Frame = +1

Query: 64  MAYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIEGRPIKLQIW 243
           M+YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI+GRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 244 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 423
           DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 424 TDLAHRRAVSKEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAARVLQKIQEGVYDVSN 603
            DLAHRRAVSKEEGEQFAKE+GL+F+EASA+TAQNVEEAFI+TAAR+LQ IQEGV+D+SN
Sbjct: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFDLSN 180

Query: 604 EASGIKLGY 630
           E+SGIK+GY
Sbjct: 181 ESSGIKVGY 189


>ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297312886|gb|EFH43309.1| GTP-binding 2 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 211

 Score =  355 bits (912), Expect = 3e-96
 Identities = 171/189 (90%), Positives = 187/189 (98%)
 Frame = +1

Query: 64  MAYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIEGRPIKLQIW 243
           M+YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT++GRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 244 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 423
           DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 424 TDLAHRRAVSKEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAARVLQKIQEGVYDVSN 603
            DLAH+RAVSKEEGEQFAKEHGL+F+EASA+TAQNVEEAFI+TAA++LQ IQ+GV+DVSN
Sbjct: 121 CDLAHKRAVSKEEGEQFAKEHGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180

Query: 604 EASGIKLGY 630
           E+SGIK+GY
Sbjct: 181 ESSGIKVGY 189


>ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
           gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName:
           Full=Ras-related protein RABB1b; Short=AtRABB1b;
           AltName: Full=Ras-related protein GB2; Short=AtGB2;
           AltName: Full=Ras-related protein Rab2C; Short=AtRab2C
           gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
           gi|3805852|emb|CAA21472.1| GTP-binding protein GB2
           [Arabidopsis thaliana] gi|7270538|emb|CAB81495.1|
           GTP-binding protein GB2 [Arabidopsis thaliana]
           gi|17529056|gb|AAL38738.1| putative GTP-binding protein
           GB2 [Arabidopsis thaliana] gi|21436445|gb|AAM51423.1|
           putative GTP-binding protein GB2 [Arabidopsis thaliana]
           gi|21553875|gb|AAM62968.1| GTP-binding protein GB2
           [Arabidopsis thaliana] gi|332661181|gb|AEE86581.1|
           GTP-binding protein GB2 [Arabidopsis thaliana]
          Length = 211

 Score =  355 bits (911), Expect = 4e-96
 Identities = 170/189 (89%), Positives = 187/189 (98%)
 Frame = +1

Query: 64  MAYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIEGRPIKLQIW 243
           M+YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT++GRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 244 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 423
           DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 424 TDLAHRRAVSKEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAARVLQKIQEGVYDVSN 603
            DLAH+RAVSKEEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA++LQ IQ+GV+DVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 604 EASGIKLGY 630
           E+SGIK+GY
Sbjct: 181 ESSGIKIGY 189


>ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
           gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related
           protein RABB1b-like [Cucumis sativus]
          Length = 211

 Score =  353 bits (906), Expect = 1e-95
 Identities = 171/189 (90%), Positives = 186/189 (98%)
 Frame = +1

Query: 64  MAYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIEGRPIKLQIW 243
           M+YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI+ RPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIW 60

Query: 244 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 423
           DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNM+IML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 424 TDLAHRRAVSKEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAARVLQKIQEGVYDVSN 603
            DLAHRRAVSKEEGEQFAKE+GL+F+EASA+TAQNVEEAFI+TAA++LQ IQEGV+DVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 604 EASGIKLGY 630
           E+SGIK+GY
Sbjct: 181 ESSGIKVGY 189


>ref|XP_002526048.1| protein with unknown function [Ricinus communis]
           gi|223534629|gb|EEF36325.1| protein with unknown
           function [Ricinus communis]
          Length = 211

 Score =  353 bits (906), Expect = 1e-95
 Identities = 172/189 (91%), Positives = 185/189 (97%)
 Frame = +1

Query: 64  MAYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIEGRPIKLQIW 243
           M+YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI+ RPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIW 60

Query: 244 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 423
           DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 424 TDLAHRRAVSKEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAARVLQKIQEGVYDVSN 603
            DLAHRRAVSKEEGEQFAKE+GL+F+EASA+TAQNVEEAFI+TA ++LQ IQEGV+DVSN
Sbjct: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGVFDVSN 180

Query: 604 EASGIKLGY 630
           E+SGIK+GY
Sbjct: 181 ESSGIKVGY 189


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