BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015641
         (2717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   704   0.0  
ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|2...   697   0.0  
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   655   0.0  
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   632   e-178
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi...   628   e-177

>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic [Vitis vinifera]
            gi|302143555|emb|CBI22116.3| unnamed protein product
            [Vitis vinifera]
          Length = 533

 Score =  704 bits (1816), Expect = 0.0
 Identities = 332/514 (64%), Positives = 426/514 (82%)
 Frame = +1

Query: 4    KFISDNTYLTMLDTKCTTMKDLQKLHAQLIKTGLIKDAVAASRVLFFCATSPAADISYAY 183
            KFISD+ +L++L+  CTTMKDLQK+HA L+KTGL K  +A S VL FCATSP  DI+YAY
Sbjct: 19   KFISDHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAY 78

Query: 184  QVFDQMTDPNIFCWNTIIRGFCQSSRPQIAISLFVDMLVGSTIEPDRLTYPSLFKAYGQL 363
             VF Q+  PN+F WNTIIRGF QSS P  AISLF+DML+ S+++P RLTYPS+FKAY QL
Sbjct: 79   LVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQL 138

Query: 364  GLAHDGAQLHGRIIKLGLQFDGFIRNSLLSMYVNCGFLGQAWRLFGEDGNSDVVAWNSMI 543
            GLAH GAQLHGR+IKLGLQFD FIRN+++ MY NCGFL + W+ F E  + D+VAWNSMI
Sbjct: 139  GLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMI 198

Query: 544  IGLAKCGEIYDSRRLFDKMPLKNTVSWNSMISGYVRNGMWNEAMDLFGKMQGVKIKPSEF 723
            +GLAKCGE+ +SR+LFD+MPL+NTVSWNSMISGYVRNG   EA+DLFG+MQ  +IKPSEF
Sbjct: 199  MGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEF 258

Query: 724  TLVSLLNACSCLGSLRQGEWIHDYIKKNSIKMNVIVITAIIDMYYKCGNIDMALEVFEMS 903
            T+VSLLNA + LG+L+QGEWIHDYI+KN+ ++NVIV  +IIDMY KCG+I  A +VFEM+
Sbjct: 259  TMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMA 318

Query: 904  PIKGLSCWNSIIFGLAVNGREEEAIEFFTRLVSSNVKPDDVSFIGVLTACSHSGMVDTAK 1083
            P+KGLS WN++I GLA+NG E EAI+ F+RL  SN++PDDV+F+GVLTAC++SG+VD AK
Sbjct: 319  PLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAK 378

Query: 1084 YYFSLMTQSYGIEPSIKHYGCMVDVLSRAELIQQARELIESMPMTPDPIIWGSFLSACRT 1263
             YFSLM+++Y IEPSIKHY CMVD L RA L+++A ELI +MP+ PD IIW S LSACR 
Sbjct: 379  EYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRK 438

Query: 1264 YGNIEMAQWAIDYLREFDLDEASGHILVSNVYASMAQFGKSVEERIFMKKKKMQKIPGCS 1443
            +GN+E+A+ A  ++ + D +++ G++L+SN+YA+  QF +++E+R+ MK+K+++K PGCS
Sbjct: 439  HGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCS 498

Query: 1444 LIEVNGEVHEFVAGGRLHPQVSEIYALLNILRFM 1545
            LIEVNGE+HEFVAGGRLHPQ  E+Y+LLN L  M
Sbjct: 499  LIEVNGEIHEFVAGGRLHPQAQEVYSLLNELGMM 532


>ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|222856190|gb|EEE93737.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  697 bits (1799), Expect = 0.0
 Identities = 346/508 (68%), Positives = 416/508 (81%), Gaps = 1/508 (0%)
 Frame = +1

Query: 34   MLDTKCTTMKDLQKLHAQLIKTGLIKDAVAASRVLFFCATSPAADISYAYQVFDQMTDPN 213
            MLD  CT+MKDLQK+HAQLIKTGL KD +AASRVL FC TSPA DI+YAY VF Q+ +PN
Sbjct: 1    MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFC-TSPAGDINYAYLVFTQIRNPN 59

Query: 214  IFCWNTIIRGFCQSSRPQIAISLFVDMLVGS-TIEPDRLTYPSLFKAYGQLGLAHDGAQL 390
            +F WNTIIRGF QSS P  AISLF+DM+  S T +P RLTYPS+FKAY QLGLAH+GAQL
Sbjct: 60   LFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQL 119

Query: 391  HGRIIKLGLQFDGFIRNSLLSMYVNCGFLGQAWRLFGEDGNSDVVAWNSMIIGLAKCGEI 570
            HGR+IKLGL+ D FI+N++L+MYVNCGFLG+A R+F      DVV WN+MIIGLAKCGEI
Sbjct: 120  HGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEI 179

Query: 571  YDSRRLFDKMPLKNTVSWNSMISGYVRNGMWNEAMDLFGKMQGVKIKPSEFTLVSLLNAC 750
              SRRLFDKM L+NTVSWNSMISGYVR G + EAM+LF +MQ   IKPSEFT+VSLLNAC
Sbjct: 180  DKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNAC 239

Query: 751  SCLGSLRQGEWIHDYIKKNSIKMNVIVITAIIDMYYKCGNIDMALEVFEMSPIKGLSCWN 930
            +CLG+LRQGEWIHDYI KN+  +N IVITAIIDMY KCG+ID AL+VF+ +P KGLSCWN
Sbjct: 240  ACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWN 299

Query: 931  SIIFGLAVNGREEEAIEFFTRLVSSNVKPDDVSFIGVLTACSHSGMVDTAKYYFSLMTQS 1110
            S+I GLA++GR  EA+  F++L SSN+KPD VSFIGVLTAC+H+GMVD AK YF LM+++
Sbjct: 300  SLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSET 359

Query: 1111 YGIEPSIKHYGCMVDVLSRAELIQQARELIESMPMTPDPIIWGSFLSACRTYGNIEMAQW 1290
            Y IEPSIKHY CMVDVL RA L+++A ELI+SMP+ PD IIWGS LS+CR YGNIEMA+ 
Sbjct: 360  YKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQ 419

Query: 1291 AIDYLREFDLDEASGHILVSNVYASMAQFGKSVEERIFMKKKKMQKIPGCSLIEVNGEVH 1470
            A   + E D +E+S  IL+SNVYA+   F +++E+R+ +K+K+M K PGCSLIEVNGEVH
Sbjct: 420  AAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEVH 479

Query: 1471 EFVAGGRLHPQVSEIYALLNILRFMLQE 1554
            EFVAGGRLHP+  +IY  L+ L   L+E
Sbjct: 480  EFVAGGRLHPRSKDIYHALDDLGLTLKE 507


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  655 bits (1691), Expect = 0.0
 Identities = 316/511 (61%), Positives = 409/511 (80%)
 Frame = +1

Query: 4    KFISDNTYLTMLDTKCTTMKDLQKLHAQLIKTGLIKDAVAASRVLFFCATSPAADISYAY 183
            K ISD TYL+MLD  CTTMKDL+K+H+QLIKTGL KD  AASR+L FCA SPA DI+YAY
Sbjct: 17   KLISDQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCA-SPAGDINYAY 75

Query: 184  QVFDQMTDPNIFCWNTIIRGFCQSSRPQIAISLFVDMLVGSTIEPDRLTYPSLFKAYGQL 363
             VF Q+ +PNIF WNTIIRGF +SS PQ +ISL++DML+ S ++P RLTYPS+FKA+ QL
Sbjct: 76   LVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQL 135

Query: 364  GLAHDGAQLHGRIIKLGLQFDGFIRNSLLSMYVNCGFLGQAWRLFGEDGNSDVVAWNSMI 543
             LA +GAQLHG++IKLGL+ D FIRN++L MYVNCGF  +A ++F    + D+VAWN+MI
Sbjct: 136  DLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMI 195

Query: 544  IGLAKCGEIYDSRRLFDKMPLKNTVSWNSMISGYVRNGMWNEAMDLFGKMQGVKIKPSEF 723
            +G+AKCG + +SRRLFDKM L+N VSWNSMISGYVRNG + +A++LF KMQ  +I+PSEF
Sbjct: 196  MGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEF 255

Query: 724  TLVSLLNACSCLGSLRQGEWIHDYIKKNSIKMNVIVITAIIDMYYKCGNIDMALEVFEMS 903
            T+VSLLNAC+CLG++RQGEWIHDY+ K   ++N IV+TAIIDMY KCG+ID A++VF+ +
Sbjct: 256  TMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSA 315

Query: 904  PIKGLSCWNSIIFGLAVNGREEEAIEFFTRLVSSNVKPDDVSFIGVLTACSHSGMVDTAK 1083
            P +GLSCWNS+I GLA+NG+E EA++ F+ L SS+++PDDVSFI VLTAC H+GMVD AK
Sbjct: 316  PRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAK 375

Query: 1084 YYFSLMTQSYGIEPSIKHYGCMVDVLSRAELIQQARELIESMPMTPDPIIWGSFLSACRT 1263
             YF LM   Y I+P IKH+ CMVDVL RA L+++A ELI SM + PD IIWGS L +C  
Sbjct: 376  DYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCK 435

Query: 1264 YGNIEMAQWAIDYLREFDLDEASGHILVSNVYASMAQFGKSVEERIFMKKKKMQKIPGCS 1443
            YGNI+MA+ A ++L E +  E+S  +LV+N YA+   F ++++ER+ +K+  + K PGCS
Sbjct: 436  YGNIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCS 495

Query: 1444 LIEVNGEVHEFVAGGRLHPQVSEIYALLNIL 1536
             IEV GEVHEFVAGGR HP++ EIY +L++L
Sbjct: 496  CIEVGGEVHEFVAGGRAHPEIKEIYRVLDVL 526


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Glycine max]
          Length = 534

 Score =  632 bits (1631), Expect = e-178
 Identities = 313/517 (60%), Positives = 402/517 (77%)
 Frame = +1

Query: 4    KFISDNTYLTMLDTKCTTMKDLQKLHAQLIKTGLIKDAVAASRVLFFCATSPAADISYAY 183
            KFISD   LTML T+CT MKDLQK+HA +IKTGL    VAASRVL FCA+S + DI+YAY
Sbjct: 20   KFISDQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASS-SGDINYAY 78

Query: 184  QVFDQMTDPNIFCWNTIIRGFCQSSRPQIAISLFVDMLVGSTIEPDRLTYPSLFKAYGQL 363
             +F  +  PN++CWNTIIRGF +SS P +AISLFVDML  S + P RLTYPS+FKAY QL
Sbjct: 79   LLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVL-PQRLTYPSVFKAYAQL 137

Query: 364  GLAHDGAQLHGRIIKLGLQFDGFIRNSLLSMYVNCGFLGQAWRLFGEDGNSDVVAWNSMI 543
            G  +DGAQLHGR++KLGL+ D FI+N+++ MY N G L +A R+F E  + DVVA NSMI
Sbjct: 138  GAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMI 197

Query: 544  IGLAKCGEIYDSRRLFDKMPLKNTVSWNSMISGYVRNGMWNEAMDLFGKMQGVKIKPSEF 723
            +GLAKCGE+  SRRLFD MP +  V+WNSMISGYVRN    EA++LF KMQG +++PSEF
Sbjct: 198  MGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEF 257

Query: 724  TLVSLLNACSCLGSLRQGEWIHDYIKKNSIKMNVIVITAIIDMYYKCGNIDMALEVFEMS 903
            T+VSLL+AC+ LG+L+ GEW+HDY+K+   ++NVIV+TAIIDMY KCG I  A+EVFE S
Sbjct: 258  TMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEAS 317

Query: 904  PIKGLSCWNSIIFGLAVNGREEEAIEFFTRLVSSNVKPDDVSFIGVLTACSHSGMVDTAK 1083
            P +GLSCWNSII GLA+NG E +AIE+F++L +S++KPD VSFIGVLTAC + G V  A+
Sbjct: 318  PTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKAR 377

Query: 1084 YYFSLMTQSYGIEPSIKHYGCMVDVLSRAELIQQARELIESMPMTPDPIIWGSFLSACRT 1263
             YFSLM   Y IEPSIKHY CMV+VL +A L+++A +LI+ MP+  D IIWGS LS+CR 
Sbjct: 378  DYFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRK 437

Query: 1264 YGNIEMAQWAIDYLREFDLDEASGHILVSNVYASMAQFGKSVEERIFMKKKKMQKIPGCS 1443
            +GN+E+A+ A   + E +  +ASG++L+SNV A+  QF +++E+RI M+++  +K PGCS
Sbjct: 438  HGNVEIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCS 497

Query: 1444 LIEVNGEVHEFVAGGRLHPQVSEIYALLNILRFMLQE 1554
             IE+ GEVHEF+AGGRLHP+  EIY LLN   F LQ+
Sbjct: 498  SIELYGEVHEFLAGGRLHPKAREIYYLLNDSSFALQD 534


>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Cucumis sativus]
            gi|449530724|ref|XP_004172343.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Cucumis sativus]
          Length = 543

 Score =  628 bits (1620), Expect = e-177
 Identities = 312/516 (60%), Positives = 399/516 (77%), Gaps = 1/516 (0%)
 Frame = +1

Query: 10   ISDNTYLTMLDTKCTTMKDLQKLHAQLIKTGLIKDAVAASRVLFFCATSPAADISYAYQV 189
            IS+  YL+M+D  CTTM+DLQ+ HA LIK+G   ++ AASR+L FCA SP  ++ YAY V
Sbjct: 21   ISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAFCA-SPLGNMDYAYLV 79

Query: 190  FDQMTDPNIFCWNTIIRGFCQSSRPQIAISLFVDMLVGSTIEPDRLTYPSLFKAYGQLGL 369
            F QM +PN+F WNT+IRGF QSS PQIA+ LF+DMLV S +EP RLTYPS+FKAY QLGL
Sbjct: 80   FLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGL 139

Query: 370  AHDGAQLHGRIIKLGLQFDGFIRNSLLSMYVNCGFLGQAWRLFGEDGNSDVVAWNSMIIG 549
            AHDGAQLHGRIIKLGLQFD FIRN++L MY   GFL +A R+F ++   DVV+WNSMI+G
Sbjct: 140  AHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILG 199

Query: 550  LAKCGEIYDSRRLFDKMPLKNTVSWNSMISGYVRNGMWNEAMDLFGKMQGVKIKPSEFTL 729
            LAKCGEI +SR+LFDKMP+KN +SWNSMI GYVRNGM+ EA+ LF KMQ  +I+PSEFT+
Sbjct: 200  LAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTM 259

Query: 730  VSLLNACSCLGSLRQGEWIHDYIKKNSIKMNVIVITAIIDMYYKCGNIDMALEVFEMSPI 909
            VSLLNA + +G+LRQG WIH+YIKKN++++N IV+TAIIDMY KCG+I  AL+VFE  P 
Sbjct: 260  VSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPC 319

Query: 910  KGLSCWNSIIFGLAVNGREEEAIEFFTRLVSSNVKPDDVSFIGVLTACSHSGMVDTAKYY 1089
            + LS WNS+IFGLAVNG E+EAI  F  L SS++KPD +SF+ VLTAC+H  MVD    +
Sbjct: 320  RSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEF 379

Query: 1090 FSLMTQSYGIEPSIKHYGCMVDVLSRAELIQQARELIESMPMTPDPIIWGSFLSACRTYG 1269
            FS M  +Y IEPSIKHY  MVD++SRA  +++A + I++MP+  D IIWG  LSACR YG
Sbjct: 380  FSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYG 439

Query: 1270 NIEMAQWAIDYLREFDLDEASGHILVSNVYASMAQFGKSVEERIFMKKKKMQKIPGCSLI 1449
            N EMA+ A + + E D +E  G++L++N++A    F  ++E+R+ M+ KK++K PG S I
Sbjct: 440  NTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSFI 499

Query: 1450 EVNGEVHEFVA-GGRLHPQVSEIYALLNILRFMLQE 1554
            EV+ EVHEF+A GGRLH +  EIY +L  L  MLQ+
Sbjct: 500  EVDEEVHEFIAGGGRLHRKAQEIYIVLGQLGVMLQD 535