BLASTX nr result

ID: Bupleurum21_contig00015628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015628
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus c...   138   5e-31
ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmi...   135   3e-30
ref|NP_194360.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis ...   133   2e-29
ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
emb|CBI27986.3| unnamed protein product [Vitis vinifera]              128   6e-28

>ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus communis]
           gi|223546662|gb|EEF48160.1| arginyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 592

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/92 (68%), Positives = 78/92 (84%)
 Frame = -3

Query: 277 ATEDEYMGSLKQQLAKLFESSIRTIVPDETEVQPLIAACNPKFGDYQCNNAMSLWTKIKG 98
           A  ++ +G+LK+Q+AKLFE+S+R  VP E +V+PL+AAC  KFGDYQCNNAMSLW+KIKG
Sbjct: 5   AENEDNVGNLKKQIAKLFEASLRETVPSEPDVEPLVAACTAKFGDYQCNNAMSLWSKIKG 64

Query: 97  KSTEFKGPQPVGQAIRSNLPKSEMIESCSIAG 2
           K+TEFKGP  VGQAI  NLP SE+IESCS+AG
Sbjct: 65  KNTEFKGPPAVGQAIMKNLPPSEVIESCSVAG 96


>ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Cucumis
           sativus] gi|449489808|ref|XP_004158422.1| PREDICTED:
           arginine--tRNA ligase, cytoplasmic-like [Cucumis
           sativus]
          Length = 590

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/93 (65%), Positives = 78/93 (83%)
 Frame = -3

Query: 280 MATEDEYMGSLKQQLAKLFESSIRTIVPDETEVQPLIAACNPKFGDYQCNNAMSLWTKIK 101
           MATE++ +G++K+QLAK+F+ S+R  VPDET+V+PL+AAC  KFGDYQCNNAM LW+KIK
Sbjct: 1   MATEEDNVGNIKRQLAKIFDVSLRATVPDETDVEPLVAACAGKFGDYQCNNAMGLWSKIK 60

Query: 100 GKSTEFKGPQPVGQAIRSNLPKSEMIESCSIAG 2
           GK T+F+GP  VGQ I  NLP SE+IES S+AG
Sbjct: 61  GKGTQFRGPPSVGQTIMKNLPPSEIIESSSVAG 93


>ref|NP_194360.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
           gi|2632105|emb|CAB11468.1| arginyl-tRNA synthetase
           [Arabidopsis thaliana] gi|4539426|emb|CAB38959.1|
           arginyl-tRNA synthetase [Arabidopsis thaliana]
           gi|7269482|emb|CAB79485.1| arginyl-tRNA synthetase
           [Arabidopsis thaliana] gi|332659782|gb|AEE85182.1|
           Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
          Length = 642

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/107 (60%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
 Frame = -3

Query: 319 RFLSVTRAKSISIMATEDEYMGSLKQQLAKLFESSIRTIVPDETEVQPLIAACN-PKFGD 143
           RF   +RAKS+  MA  +E+ G+LK+QLAKLF+ S++  VPDE  V+PL+AA    KFGD
Sbjct: 40  RFAFSSRAKSVVAMAANEEFTGNLKRQLAKLFDVSLKLTVPDEPSVEPLVAASALGKFGD 99

Query: 142 YQCNNAMSLWTKIKGKSTEFKGPQPVGQAIRSNLPKSEMIESCSIAG 2
           YQCNNAM LW+ IKGK T+FKGP  VGQA+  +LP SEM+ESCS+AG
Sbjct: 100 YQCNNAMGLWSIIKGKGTQFKGPPAVGQALVKSLPTSEMVESCSVAG 146


>ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|222843225|gb|EEE80772.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/94 (64%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
 Frame = -3

Query: 280 MATEDEYMGSLKQQLAKLFESSIRTIVPDETEVQPLIAACNPKFGDYQCNNAMSLWTKIK 101
           MA E E  G+LKQ+LAKLF+ S+   VP E +++PL+AAC  KFGDYQCNNAM LW+KIK
Sbjct: 1   MAAEQENAGNLKQKLAKLFQLSLEATVPGEPDIEPLVAACTAKFGDYQCNNAMGLWSKIK 60

Query: 100 GK-STEFKGPQPVGQAIRSNLPKSEMIESCSIAG 2
           G+   EF+GP  VGQAI  NLP+SEMIESCS+AG
Sbjct: 61  GRPGIEFRGPPAVGQAIMKNLPQSEMIESCSVAG 94


>emb|CBI27986.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/110 (55%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
 Frame = -3

Query: 328 SSRRFLSVTRAKSISIMATEDEYMGSLKQQLAKLFESSIRTIVPDETEVQPLIAACNPKF 149
           +SRR + +++  SIS M  ++E  G++K+QL+KLFE S+R  VP E++V+PLIAAC PKF
Sbjct: 42  TSRRSVPISKT-SISTMTNDEENAGTVKKQLSKLFEQSLRITVPSESDVEPLIAACAPKF 100

Query: 148 GDYQCNNAMSLWTKIKGKSTE-FKGPQPVGQAIRSNLPKSEMIESCSIAG 2
           GDYQCNNAM LW++IK K    FKGP  +G+ I  NLP +EMIE C++AG
Sbjct: 101 GDYQCNNAMGLWSRIKNKKDNGFKGPPTIGKVIMENLPPTEMIEKCTLAG 150


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