BLASTX nr result

ID: Bupleurum21_contig00015627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015627
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         288   6e-76
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   288   6e-76
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   288   1e-75
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         288   1e-75
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   288   1e-75

>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  288 bits (738), Expect = 6e-76
 Identities = 135/198 (68%), Positives = 164/198 (82%)
 Frame = -2

Query: 601 KMRSLDNVYEATSPVQTTFDYSLFCLMAECDPVTFEEATEESKWNKVMDEEIGAIKKNDT 422
           + RS+  +YE T   +   + +LFCL AEC+P+ F+EA E+  W   MDEEI +I+KNDT
Sbjct: 307 RFRSIQELYEVTENQE---NLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDT 363

Query: 421 WELTSLPEGHKAIGVKWVYKTKTNQDGKVEKYKARLVAKGYKQRYGIDYDEVFAPVARVD 242
           WELTSLP GHKAIGVKWVYK K N  G+VE+YKARLVAKGY QR GIDYDE+FAPVAR++
Sbjct: 364 WELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLE 423

Query: 241 TIRLLTAIAAQNQWKIYQMDVKSAFLNGYLEEEVYIDQPPGYIQKGQEDKVYRLKKALYG 62
           T+RL+ ++AAQN+WKI+QMDVKSAFLNG LEEEVYI+QP GYI KG+EDKV RLKK LYG
Sbjct: 424 TVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYG 483

Query: 61  LKQAPRAWNTRVDDHFQK 8
           LKQAPRAWNTR+D +F++
Sbjct: 484 LKQAPRAWNTRIDKYFKE 501


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  288 bits (738), Expect = 6e-76
 Identities = 135/198 (68%), Positives = 164/198 (82%)
 Frame = -2

Query: 601  KMRSLDNVYEATSPVQTTFDYSLFCLMAECDPVTFEEATEESKWNKVMDEEIGAIKKNDT 422
            + RS+  +YE T   +   + +LFCL AEC+P+ F+EA E+  W   MDEEI +I+KNDT
Sbjct: 810  RFRSIQELYEVTENQE---NLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDT 866

Query: 421  WELTSLPEGHKAIGVKWVYKTKTNQDGKVEKYKARLVAKGYKQRYGIDYDEVFAPVARVD 242
            WELTSLP GHKAIGVKWVYK K N  G+VE+YKARLVAKGY QR GIDYDE+FAPVAR++
Sbjct: 867  WELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLE 926

Query: 241  TIRLLTAIAAQNQWKIYQMDVKSAFLNGYLEEEVYIDQPPGYIQKGQEDKVYRLKKALYG 62
            T+RL+ ++AAQN+WKI+QMDVKSAFLNG LEEEVYI+QP GYI KG+EDKV RLKK LYG
Sbjct: 927  TVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYG 986

Query: 61   LKQAPRAWNTRVDDHFQK 8
            LKQAPRAWNTR+D +F++
Sbjct: 987  LKQAPRAWNTRIDKYFKE 1004


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  288 bits (736), Expect = 1e-75
 Identities = 136/198 (68%), Positives = 164/198 (82%)
 Frame = -2

Query: 601  KMRSLDNVYEATSPVQTTFDYSLFCLMAECDPVTFEEATEESKWNKVMDEEIGAIKKNDT 422
            + RS+  +YE T   +   + +LFCL AEC+P+ F+EA E+  W   MDEEI +I+KNDT
Sbjct: 810  RFRSIQELYEVTENQE---NLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDT 866

Query: 421  WELTSLPEGHKAIGVKWVYKTKTNQDGKVEKYKARLVAKGYKQRYGIDYDEVFAPVARVD 242
            WELTSLP GHK IGVKWVYK K N  G+VE+YKARLVAKGY QR GIDYDEVFAPVAR++
Sbjct: 867  WELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLE 926

Query: 241  TIRLLTAIAAQNQWKIYQMDVKSAFLNGYLEEEVYIDQPPGYIQKGQEDKVYRLKKALYG 62
            T+RL+ ++AAQN+WKI+QMDVKSAFLNG LEEEVYI+QP GYI KG+EDKV RLKKALYG
Sbjct: 927  TVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYG 986

Query: 61   LKQAPRAWNTRVDDHFQK 8
            LKQAPRAWNTR+D +F++
Sbjct: 987  LKQAPRAWNTRIDKYFKE 1004


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  288 bits (736), Expect = 1e-75
 Identities = 135/198 (68%), Positives = 164/198 (82%)
 Frame = -2

Query: 601  KMRSLDNVYEATSPVQTTFDYSLFCLMAECDPVTFEEATEESKWNKVMDEEIGAIKKNDT 422
            + RS+  +YE T   +   + +LFCL AEC+P+ F++A E+  W   MDEEI +I+KNDT
Sbjct: 810  RFRSIQELYEVTENQE---NLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDT 866

Query: 421  WELTSLPEGHKAIGVKWVYKTKTNQDGKVEKYKARLVAKGYKQRYGIDYDEVFAPVARVD 242
            WELTSLP GHKAIGVKWVYK K N  G+VE+YKARLVAKGY QR GIDYDEVFAPVAR++
Sbjct: 867  WELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLE 926

Query: 241  TIRLLTAIAAQNQWKIYQMDVKSAFLNGYLEEEVYIDQPPGYIQKGQEDKVYRLKKALYG 62
            T+RL+ ++AAQN+WKI+QMDVKSAFLNG LEEEVYI+QP GYI KG+EDKV RLKK LYG
Sbjct: 927  TVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYG 986

Query: 61   LKQAPRAWNTRVDDHFQK 8
            LKQAPRAWNTR+D +F++
Sbjct: 987  LKQAPRAWNTRIDKYFKE 1004


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  288 bits (736), Expect = 1e-75
 Identities = 135/198 (68%), Positives = 164/198 (82%)
 Frame = -2

Query: 601  KMRSLDNVYEATSPVQTTFDYSLFCLMAECDPVTFEEATEESKWNKVMDEEIGAIKKNDT 422
            + RS+  +YE T   +   + +LFCL AEC+P+ F++A E+  W   MDEEI +I+KNDT
Sbjct: 810  RFRSIQELYEVTENQE---NLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDT 866

Query: 421  WELTSLPEGHKAIGVKWVYKTKTNQDGKVEKYKARLVAKGYKQRYGIDYDEVFAPVARVD 242
            WELTSLP GHKAIGVKWVYK K N  G+VE+YKARLVAKGY QR GIDYDEVFAPVAR++
Sbjct: 867  WELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLE 926

Query: 241  TIRLLTAIAAQNQWKIYQMDVKSAFLNGYLEEEVYIDQPPGYIQKGQEDKVYRLKKALYG 62
            T+RL+ ++AAQN+WKI+QMDVKSAFLNG LEEEVYI+QP GYI KG+EDKV RLKK LYG
Sbjct: 927  TVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYG 986

Query: 61   LKQAPRAWNTRVDDHFQK 8
            LKQAPRAWNTR+D +F++
Sbjct: 987  LKQAPRAWNTRIDKYFKE 1004


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