BLASTX nr result

ID: Bupleurum21_contig00015618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015618
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAK50799.1| inwardly rectifying potassium channel subunit [D...   287   2e-75
ref|XP_002275549.1| PREDICTED: potassium channel KAT1 [Vitis vin...   152   9e-35
gb|AAL24466.1|AF359522_1 inward rectifying potassium channel [Vi...   152   9e-35
gb|AAL09479.1|AF359521_1 inward rectifying shaker-like K+ channe...   150   3e-34
emb|CAC87141.1| K+ channel protein [Populus tremula x Populus tr...   137   4e-30

>emb|CAK50799.1| inwardly rectifying potassium channel subunit [Daucus carota]
          Length = 766

 Score =  287 bits (734), Expect = 2e-75
 Identities = 149/232 (64%), Positives = 179/232 (77%)
 Frame = -3

Query: 718  HFC*ELENSGLQCHKHPGSVFREHLDVRAEGESFYHSSQQHNQSEISLIQERKSVITDKE 539
            +F  +LENSGLQ HK PGS++ E LDVRAEGE++YH++Q ++ S   LIQ   SV  + +
Sbjct: 492  NFYKDLENSGLQSHKRPGSIYSEQLDVRAEGENYYHANQIYDLSGEPLIQGN-SVAAEND 550

Query: 538  ATATTGYEMEMKPTTDDDQTALHFAVRRGHPETVRILLEGGANVNKPDAKGMTPITLAEH 359
             T + GY ME+K   +DDQTALH AVR GHPE VRILLEGGANVNK DAKG TPI+LAE+
Sbjct: 551  RTKS-GYGMEVKSIAEDDQTALHVAVRTGHPENVRILLEGGANVNKLDAKGRTPISLAEN 609

Query: 358  QGNKCIYDLLLSYEDTKSTNEHKIQFLAESCYGTRNSQRKQTRDGVITSYISDLKDSTCS 179
            QGNKCIYDLLLSY++T+STNE KI+ L ES Y TRN Q K+T  GV T   S  KDS CS
Sbjct: 610  QGNKCIYDLLLSYQNTRSTNEQKIELLEESSYETRNKQFKETHTGVTTCSSSYQKDSLCS 669

Query: 178  SSKTLNHPVQTEVKKMNARRVTIHVNNASQKQFGKLINLPGSVEELFRIAGK 23
            SS+ LNH  + EV+K+N  RVTIH+NNASQKQ  KLINLPGS++ELFRIAG+
Sbjct: 670  SSEALNHSAEAEVRKINTIRVTIHMNNASQKQLAKLINLPGSIDELFRIAGQ 721


>ref|XP_002275549.1| PREDICTED: potassium channel KAT1 [Vitis vinifera]
          Length = 791

 Score =  152 bits (384), Expect = 9e-35
 Identities = 106/245 (43%), Positives = 135/245 (55%), Gaps = 18/245 (7%)
 Frame = -3

Query: 703  LENSGL-QCHKHPGSVFREHLDVRAEGESFYHSSQQHNQS---EISLIQERKSVITDKEA 536
            LE+SG    H  P S+ RE +D    G S  H+   H+QS   + S+ + R   +   EA
Sbjct: 500  LESSGFTDPHMDPESILREWIDGVPPGGSLSHAGC-HDQSPHGDPSIQEARDIGLLGSEA 558

Query: 535  TA---------TTGYEMEMKPTTDDDQTALHFAVRRGHPETVRILLEGGANVNKPDAKGM 383
            T          +TG  ++     +D QTALH AV  GH E VRILLE GANVNK DA+G 
Sbjct: 559  TKKSKADKAHESTGCGIDANSAAEDGQTALHVAVCNGHLEMVRILLERGANVNKKDARGW 618

Query: 382  TPITLAEHQGNKCIYDLLLSYEDTKSTNEHKIQFLAESCYGTRNSQRKQTRDGVITSYIS 203
            TP  LAE +G K IYDLLLSYE+ +  +EHKI F+         SQ   TR G    + S
Sbjct: 619  TPKALAEQEGKKSIYDLLLSYENRRLLDEHKIHFIGSGAADCCTSQGLHTRTGGPNFHNS 678

Query: 202  DLKD-STCSSSKTLNHPVQTEVKKMNARRVTIHVN----NASQKQFGKLINLPGSVEELF 38
              K  ST S+S + + P   +V  +  RRVTIH      + SQ QFGKLI LP S+EEL 
Sbjct: 679  QFKKVSTNSNSGSPSPPGNKDVMTLTKRRVTIHRQFQNASTSQGQFGKLIILPDSIEELL 738

Query: 37   RIAGK 23
            +IAG+
Sbjct: 739  QIAGQ 743


>gb|AAL24466.1|AF359522_1 inward rectifying potassium channel [Vitis vinifera]
          Length = 791

 Score =  152 bits (384), Expect = 9e-35
 Identities = 106/245 (43%), Positives = 135/245 (55%), Gaps = 18/245 (7%)
 Frame = -3

Query: 703  LENSGL-QCHKHPGSVFREHLDVRAEGESFYHSSQQHNQS---EISLIQERKSVITDKEA 536
            LE+SG    H  P S+ RE +D    G S  H+   H+QS   + S+ + R   +   EA
Sbjct: 500  LESSGFTDPHMDPESILREWIDGVPPGGSLSHAGC-HDQSPHGDPSIQEARDIDLLGSEA 558

Query: 535  TA---------TTGYEMEMKPTTDDDQTALHFAVRRGHPETVRILLEGGANVNKPDAKGM 383
            T          +TG  ++     +D QTALH AV  GH E VRILLE GANVNK DA+G 
Sbjct: 559  TKKSKADKAHESTGCGIDANSAAEDGQTALHVAVCNGHLEMVRILLERGANVNKKDARGW 618

Query: 382  TPITLAEHQGNKCIYDLLLSYEDTKSTNEHKIQFLAESCYGTRNSQRKQTRDGVITSYIS 203
            TP  LAE +G K IYDLLLSYE+ +  +EHKI F+         SQ   TR G    + S
Sbjct: 619  TPKALAEQEGKKSIYDLLLSYENRRLLDEHKIHFIGSGARDCCTSQGLHTRTGGPNFHNS 678

Query: 202  DLKD-STCSSSKTLNHPVQTEVKKMNARRVTIHVN----NASQKQFGKLINLPGSVEELF 38
              K  ST S+S + + P   +V  +  RRVTIH      + SQ QFGKLI LP S+EEL 
Sbjct: 679  QFKKVSTNSNSGSPSPPGNKDVMTLTKRRVTIHRQFQNASTSQGQFGKLIILPDSIEELL 738

Query: 37   RIAGK 23
            +IAG+
Sbjct: 739  QIAGQ 743


>gb|AAL09479.1|AF359521_1 inward rectifying shaker-like K+ channel [Vitis vinifera]
          Length = 791

 Score =  150 bits (379), Expect = 3e-34
 Identities = 105/245 (42%), Positives = 134/245 (54%), Gaps = 18/245 (7%)
 Frame = -3

Query: 703  LENSGL-QCHKHPGSVFREHLDVRAEGESFYHSSQQHNQS---EISLIQERKSVITDKEA 536
            LE+SG    H  P S+ RE +D    G S  H+   H+QS   + S+ + R   +   EA
Sbjct: 500  LESSGFTDPHMDPDSILREWIDGVPPGGSLSHAGC-HDQSPHGDPSIQEARDIGLLGSEA 558

Query: 535  TA---------TTGYEMEMKPTTDDDQTALHFAVRRGHPETVRILLEGGANVNKPDAKGM 383
            T          +TG  ++     +D QTALH AV  GH E VRILLE GANVNK DA+G 
Sbjct: 559  TKKSKADKAHESTGCGIDANSAAEDGQTALHVAVCNGHLEMVRILLERGANVNKKDARGW 618

Query: 382  TPITLAEHQGNKCIYDLLLSYEDTKSTNEHKIQFLAESCYGTRNSQRKQTRDGVITSYIS 203
            TP  LAE +G K IYDLLLSYE+ +  +EHKI F+         SQ   TR G    + S
Sbjct: 619  TPKALAEQEGKKSIYDLLLSYENRRLLDEHKIHFIGSDAADCCTSQGLHTRTGGPNFHNS 678

Query: 202  DLKD-STCSSSKTLNHPVQTEVKKMNARRVTIHVN----NASQKQFGKLINLPGSVEELF 38
              K  ST S+S + + P   +V  +  RRVTIH      + SQ Q GKLI LP S+EEL 
Sbjct: 679  QFKKVSTNSNSGSPSPPGNKDVMTLTKRRVTIHRQFQNASTSQGQLGKLIILPDSIEELL 738

Query: 37   RIAGK 23
            +IAG+
Sbjct: 739  QIAGQ 743


>emb|CAC87141.1| K+ channel protein [Populus tremula x Populus tremuloides]
          Length = 751

 Score =  137 bits (344), Expect = 4e-30
 Identities = 95/250 (38%), Positives = 133/250 (53%), Gaps = 26/250 (10%)
 Frame = -3

Query: 694  SGLQCHKHPGSVFREHLDVRAEGESFYHSSQQ-------------HNQSEISLIQERKSV 554
            S ++ +   G V   HL ++        S  Q             H   ++S+ + R++ 
Sbjct: 477  STIKANPEDGCVIMNHLSMKLRRPESMDSESQNREEWCSKRGCKDHMDGDLSVNKARETD 536

Query: 553  ITDKEATATT----GYEME----MKPTTDDDQTALHFAVRRGHPETVRILLEGGANVNKP 398
                +AT  +    GY+      ++   +D +TALH AV  GH E V+ILLEGGAN+NKP
Sbjct: 537  SQGSKATRKSELGKGYDCTRHEGLETAVEDSETALHAAVCEGHVEMVKILLEGGANINKP 596

Query: 397  DAKGMTPITLAEHQGNKCIYDLLLSYEDTKSTNEHKIQFLAESCYG-TRNSQRKQTRDGV 221
            DA+G TP  LAE QGNK I+DLLL+YE+    NEH+I F+     G T+ SQ K   +  
Sbjct: 597  DARGWTPKALAEQQGNKSIHDLLLNYENRNILNEHRIDFIESETVGDTKKSQEKHEGNKA 656

Query: 220  ITSYISDLKDSTCSSSKTLNHPVQTEVKKMNARRVTIH--VNNAS--QKQFGKLINLPGS 53
            +T+Y      S+C S      P   + KK + +RVTIH  + N S  Q + GKLI LP S
Sbjct: 657  LTNY------SSCIS----RCPHDRDAKK-STKRVTIHRQLQNRSTLQSRLGKLIILPDS 705

Query: 52   VEELFRIAGK 23
            +EEL RIAG+
Sbjct: 706  MEELLRIAGE 715


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