BLASTX nr result

ID: Bupleurum21_contig00015577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015577
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134624.1| PREDICTED: putative germin-like protein 2-1-...    98   2e-34
ref|XP_004134615.1| PREDICTED: putative germin-like protein 2-1-...    97   4e-34
ref|XP_004158658.1| PREDICTED: putative germin-like protein 2-1-...    93   5e-33
ref|XP_004134642.1| PREDICTED: putative germin-like protein 2-1-...    93   9e-33
ref|XP_004171632.1| PREDICTED: putative germin-like protein 2-3-...    89   2e-32

>ref|XP_004134624.1| PREDICTED: putative germin-like protein 2-1-like [Cucumis sativus]
           gi|449490615|ref|XP_004158656.1| PREDICTED: putative
           germin-like protein 2-1-like [Cucumis sativus]
          Length = 215

 Score = 97.8 bits (242), Expect(2) = 2e-34
 Identities = 45/57 (78%), Positives = 50/57 (87%)
 Frame = +1

Query: 376 SGNTSNAVGSRVTPVATTQIPGLNTLGISIVRIDYAPWGINPPHTHPRATEILTVIE 546
           +G+T+N VGS VTP    QIPGLNTLGIS+VRIDYAPWGIN PHTHPRATEILTV+E
Sbjct: 64  AGDTNNFVGSAVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120



 Score = 73.6 bits (179), Expect(2) = 2e-34
 Identities = 33/65 (50%), Positives = 47/65 (72%)
 Frame = +3

Query: 180 MAKLIVLLGLIALSFFVAMAADHSPLQDFCLAESNSQVLLNGFACKNPGTVQASDFSFSG 359
           MA  +  L  +A++  +A+A+D SPLQDFC+A+ NS V +NG  CK+P  V+A DFS SG
Sbjct: 1   MASQLFFLTFLAITCSIALASDPSPLQDFCVADPNSPVKVNGVVCKDPNAVEAKDFSMSG 60

Query: 360 LHIAG 374
           L++AG
Sbjct: 61  LNVAG 65


>ref|XP_004134615.1| PREDICTED: putative germin-like protein 2-1-like [Cucumis sativus]
           gi|449490617|ref|XP_004158657.1| PREDICTED: putative
           germin-like protein 2-1-like [Cucumis sativus]
          Length = 215

 Score = 97.4 bits (241), Expect(2) = 4e-34
 Identities = 45/57 (78%), Positives = 50/57 (87%)
 Frame = +1

Query: 376 SGNTSNAVGSRVTPVATTQIPGLNTLGISIVRIDYAPWGINPPHTHPRATEILTVIE 546
           +G+T+N VGS VTP    QIPGLNTLGIS+VRIDYAPWGIN PHTHPRATEILTV+E
Sbjct: 64  AGDTNNPVGSVVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120



 Score = 72.8 bits (177), Expect(2) = 4e-34
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = +3

Query: 180 MAKLIVLLGLIALSFFVAMAADHSPLQDFCLAESNSQVLLNGFACKNPGTVQASDFSFSG 359
           MA     L   AL+  +A+A+D SPLQDFC+A+ NS V +NGF CK+P  V+A DF  SG
Sbjct: 1   MAASAFFLTFFALTCSIALASDPSPLQDFCVADKNSPVKVNGFVCKDPNVVEAKDFFMSG 60

Query: 360 LHIAG 374
           L++AG
Sbjct: 61  LNVAG 65


>ref|XP_004158658.1| PREDICTED: putative germin-like protein 2-1-like [Cucumis sativus]
          Length = 216

 Score = 92.8 bits (229), Expect(2) = 5e-33
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = +1

Query: 382 NTSNAVGSRVTPVATTQIPGLNTLGISIVRIDYAPWGINPPHTHPRATEILTVIE 546
           +T+   GS+VTPV   QIPGLNTLGIS+ RIDYAPWGIN PHTHPRATEILTV+E
Sbjct: 67  DTNTPTGSQVTPVNVVQIPGLNTLGISLARIDYAPWGINAPHTHPRATEILTVLE 121



 Score = 73.6 bits (179), Expect(2) = 5e-33
 Identities = 32/63 (50%), Positives = 46/63 (73%)
 Frame = +3

Query: 183 AKLIVLLGLIALSFFVAMAADHSPLQDFCLAESNSQVLLNGFACKNPGTVQASDFSFSGL 362
           ++L+  +  + +SF ++ A+D SPLQDFC+A+ NS V +NG  CKNP  V+A DF FSGL
Sbjct: 3   SQLLFSVFFLLISFSISFASDPSPLQDFCVADPNSPVKVNGLVCKNPSLVEAKDFFFSGL 62

Query: 363 HIA 371
           H+A
Sbjct: 63  HVA 65


>ref|XP_004134642.1| PREDICTED: putative germin-like protein 2-1-like [Cucumis sativus]
          Length = 216

 Score = 92.8 bits (229), Expect(2) = 9e-33
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = +1

Query: 382 NTSNAVGSRVTPVATTQIPGLNTLGISIVRIDYAPWGINPPHTHPRATEILTVIE 546
           +T+   GS+VTPV   QIPGLNTLGIS+ RIDYAPWGIN PHTHPRATEILTV+E
Sbjct: 67  DTNTPTGSQVTPVNVVQIPGLNTLGISLARIDYAPWGINAPHTHPRATEILTVLE 121



 Score = 72.8 bits (177), Expect(2) = 9e-33
 Identities = 32/63 (50%), Positives = 45/63 (71%)
 Frame = +3

Query: 183 AKLIVLLGLIALSFFVAMAADHSPLQDFCLAESNSQVLLNGFACKNPGTVQASDFSFSGL 362
           ++L+     + +SF ++ A+D SPLQDFC+A+ NS V +NG  CKNP  V+A DF FSGL
Sbjct: 3   SQLLFSAFFLLISFSISFASDPSPLQDFCVADPNSPVKVNGLVCKNPSLVEAKDFFFSGL 62

Query: 363 HIA 371
           H+A
Sbjct: 63  HVA 65


>ref|XP_004171632.1| PREDICTED: putative germin-like protein 2-3-like [Cucumis sativus]
          Length = 217

 Score = 89.0 bits (219), Expect(2) = 2e-32
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = +1

Query: 376 SGNTSNAVGSRVTPVATTQIPGLNTLGISIVRIDYAPWGINPPHTHPRATEILTVIE 546
           + NTSNA+G  VTPV   ++PGLNTLGISIVRIDYAP GINP HTHPRA+EIL V+E
Sbjct: 66  AANTSNALGCHVTPVTPLEMPGLNTLGISIVRIDYAPQGINPLHTHPRASEILIVLE 122



 Score = 75.5 bits (184), Expect(2) = 2e-32
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = +3

Query: 192 IVLLGLIALSFFVAMAADHSPLQDFCLAESNSQVLLNGFACKNPGTVQASDFSFSGLHIA 371
           I+ +  +A SFFV  A+D +P+QDFC+A++ + VLLNG  CK+P  V A DFSF GLHIA
Sbjct: 7   ILTISFLAFSFFVVFASDQNPIQDFCVADNGTTVLLNGLTCKDPKQVVADDFSFGGLHIA 66


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