BLASTX nr result

ID: Bupleurum21_contig00015572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015572
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853...   291   4e-76
emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]   290   5e-76
emb|CBI33069.3| unnamed protein product [Vitis vinifera]              289   1e-75
ref|XP_002320668.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-66
gb|ADL36701.1| GRF domain class transcription factor [Malus x do...   252   2e-64

>ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853530 [Vitis vinifera]
          Length = 597

 Score =  291 bits (744), Expect = 4e-76
 Identities = 165/338 (48%), Positives = 198/338 (58%), Gaps = 10/338 (2%)
 Frame = -2

Query: 986  MHSLFTRCREPFTPSQWLDLELQALIYKYIVANVPVPSHLLYQIRKSLNPFLYVGSS-TS 810
            MH  F   R PFTPSQW++LE QALIYKYI ANVPVPS+LL  IRKSLNPF   GSS TS
Sbjct: 145  MHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNPFGLSGSSSTS 204

Query: 809  YAPYSFGWAPFRLGLSGSNDPEPGRCRRTDGKKWRCAKEAVPDQKYCERHINRGRHRSRK 630
             A  S  W  F LG SG+ DPEPGRCRRTDGKKWRC+++AV DQKYCERHINRGRHRSRK
Sbjct: 205  LAHNSLSWGSFHLGFSGNTDPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRK 264

Query: 629  PVESRKDLVLAGTNNAMEXXXXXXXXXXXXXXSNGTXXXXXXXXXXXXXXXSNAANPSAN 450
            PVE +    ++G  N+ +              S G                  AANPSA+
Sbjct: 265  PVEGQTGHAVSGPTNS-KVVPMPSTMSASVMSSGGASNSLAIAQNQFKSLQPVAANPSAD 323

Query: 449  VVLERV---QGQTIKSPTVDIKSEDTRLSFLPQHVGTEGPPMQEFGLVSSTSLLYTSDKS 279
             ++ R+   QG ++ SPTVD+KS DT  S     +  E  P  EFG VSS SLL  S++ 
Sbjct: 324  TLVNRLQEPQGLSMISPTVDLKSRDTPFSISKLPIPFEESPQSEFGFVSSDSLLNPSERG 383

Query: 278  SYTDSRNRDVFLSFNKQDAQNEQPLHRFMDDWPKNQSERL-TGWSEEFKSDWTQL-XXXX 105
            SY +SRN   FL F+ Q+ Q++ P  +F+DDWPK+QS R    W EE KSDWTQL     
Sbjct: 384  SYMNSRNYTPFLDFSDQETQDQHPFRQFIDDWPKDQSNRSDIAWPEELKSDWTQLSISIP 443

Query: 104  XXXXXXXXXXXXXPREKFTVTP----SELDPTNMNLAL 3
                          +EK   +P     ELDP  M L +
Sbjct: 444  MSSSDFSSSSSSPTQEKLAFSPLRLSRELDPVQMGLGV 481


>emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]
          Length = 497

 Score =  290 bits (743), Expect = 5e-76
 Identities = 164/338 (48%), Positives = 198/338 (58%), Gaps = 10/338 (2%)
 Frame = -2

Query: 986  MHSLFTRCREPFTPSQWLDLELQALIYKYIVANVPVPSHLLYQIRKSLNPFLYVGSS-TS 810
            MH  F   R PFTPSQW++LE QALIYKYI ANVPVPS+LL  IRKSLNPF   GSS TS
Sbjct: 45   MHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNPFGLSGSSSTS 104

Query: 809  YAPYSFGWAPFRLGLSGSNDPEPGRCRRTDGKKWRCAKEAVPDQKYCERHINRGRHRSRK 630
             A  S  W  F LG SG+ DPEPGRCRRTDGKKWRC+++AV DQKYCERHINRGRHRSRK
Sbjct: 105  LAHNSLSWGSFHLGFSGNTDPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRK 164

Query: 629  PVESRKDLVLAGTNNAMEXXXXXXXXXXXXXXSNGTXXXXXXXXXXXXXXXSNAANPSAN 450
            PVE +    ++G  N+ +              S G                  AANPSA+
Sbjct: 165  PVEGQTGHAVSGPTNS-KVVPMPSTMSASVMSSGGASNSLAIAQNQFKSLQPVAANPSAD 223

Query: 449  VVLERV---QGQTIKSPTVDIKSEDTRLSFLPQHVGTEGPPMQEFGLVSSTSLLYTSDKS 279
             ++ R+   QG ++ SPT+D+KS DT  S     +  E  P  EFG VSS SLL  S++ 
Sbjct: 224  TLVNRLQEPQGLSMISPTIDLKSRDTPFSISKLPIPFEESPQSEFGFVSSDSLLNPSERG 283

Query: 278  SYTDSRNRDVFLSFNKQDAQNEQPLHRFMDDWPKNQSERL-TGWSEEFKSDWTQL-XXXX 105
            SY +SRN   FL F+ Q+ Q++ P  +F+DDWPK+QS R    W EE KSDWTQL     
Sbjct: 284  SYMNSRNYTPFLDFSDQETQDQHPFRQFIDDWPKDQSNRSDIAWPEELKSDWTQLSISIP 343

Query: 104  XXXXXXXXXXXXXPREKFTVTP----SELDPTNMNLAL 3
                          +EK   +P     ELDP  M L +
Sbjct: 344  MSSSDFSSSSSSPTQEKLAFSPLRLSRELDPVQMGLGV 381


>emb|CBI33069.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  289 bits (740), Expect = 1e-75
 Identities = 156/295 (52%), Positives = 186/295 (63%), Gaps = 5/295 (1%)
 Frame = -2

Query: 986  MHSLFTRCREPFTPSQWLDLELQALIYKYIVANVPVPSHLLYQIRKSLNPFLYVGSS-TS 810
            MH  F   R PFTPSQW++LE QALIYKYI ANVPVPS+LL  IRKSLNPF   GSS TS
Sbjct: 156  MHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNPFGLSGSSSTS 215

Query: 809  YAPYSFGWAPFRLGLSGSNDPEPGRCRRTDGKKWRCAKEAVPDQKYCERHINRGRHRSRK 630
             A  S  W  F LG SG+ DPEPGRCRRTDGKKWRC+++AV DQKYCERHINRGRHRSRK
Sbjct: 216  LAHNSLSWGSFHLGFSGNTDPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRK 275

Query: 629  PVESRKDLVLAGTNNAMEXXXXXXXXXXXXXXSNGTXXXXXXXXXXXXXXXSNAANPSAN 450
            PVE +    ++G  N+ +              S G                  AANPSA+
Sbjct: 276  PVEGQTGHAVSGPTNS-KVVPMPSTMSASVMSSGGASNSLAIAQNQFKSLQPVAANPSAD 334

Query: 449  VVLERV---QGQTIKSPTVDIKSEDTRLSFLPQHVGTEGPPMQEFGLVSSTSLLYTSDKS 279
             ++ R+   QG ++ SPTVD+KS DT  S     +  E  P  EFG VSS SLL  S++ 
Sbjct: 335  TLVNRLQEPQGLSMISPTVDLKSRDTPFSISKLPIPFEESPQSEFGFVSSDSLLNPSERG 394

Query: 278  SYTDSRNRDVFLSFNKQDAQNEQPLHRFMDDWPKNQSERL-TGWSEEFKSDWTQL 117
            SY +SRN   FL F+ Q+ Q++ P  +F+DDWPK+QS R    W EE KSDWTQL
Sbjct: 395  SYMNSRNYTPFLDFSDQETQDQHPFRQFIDDWPKDQSNRSDIAWPEELKSDWTQL 449


>ref|XP_002320668.1| predicted protein [Populus trichocarpa] gi|222861441|gb|EEE98983.1|
            predicted protein [Populus trichocarpa]
          Length = 607

 Score =  258 bits (659), Expect = 3e-66
 Identities = 147/337 (43%), Positives = 192/337 (56%), Gaps = 11/337 (3%)
 Frame = -2

Query: 986  MHSLFTRCREPFTPSQWLDLELQALIYKYIVANVPVPSHLLYQIRKSLNPFLYVGSSTSY 807
            MH   T  R PFTPSQW++LE QALIYKYI A VPVPS+L+  ++KS+ P+   GSST  
Sbjct: 153  MHGPLTGVRGPFTPSQWMELEHQALIYKYITARVPVPSNLIIPLKKSVYPYSLPGSSTGS 212

Query: 806  APY-SFGWAPFRLGLSGSN-DPEPGRCRRTDGKKWRCAKEAVPDQKYCERHINRGRHRSR 633
             P+ S GW+ F LG  G+N DPEPGRCRRTDGKKWRC+++AV DQKYCERHINRGRHRSR
Sbjct: 213  FPHNSLGWSAFHLGYPGNNTDPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSR 272

Query: 632  KPVESRKDLVLAGTNNAMEXXXXXXXXXXXXXXSNGTXXXXXXXXXXXXXXXSNAANPSA 453
            KPVE +      GT ++                   +                 AAN SA
Sbjct: 273  KPVEGQTGHAATGTASSKVVPMSNSMSKLAITSGGASNSIAMTTQQQFKILQPAAANTSA 332

Query: 452  NVVLERVQGQ---TIKSPTVDIKSEDTRLSFLPQHVGTEGPPMQEFGLVSSTSLLYTSDK 282
            +V + R Q     ++ S T++ KS+++      Q +  E     EFG VSS SLL  S K
Sbjct: 333  DVDVNRAQDAQSISMMSSTINRKSDESSFFVPKQDILMEQCSQTEFGFVSSDSLLNPSQK 392

Query: 281  SSYTDSRNRDVFLSFNKQDAQNEQPLHRFMDDWPKNQSE-RLTGWSEEFKSDWTQL-XXX 108
            SSY +S+  + FL+FN +++Q++ PL +F+D+WPK+QS   +  W EE KSDWTQL    
Sbjct: 393  SSYINSKPYESFLNFNDEESQDQHPLRQFIDEWPKDQSNCSVISWPEELKSDWTQLSMSI 452

Query: 107  XXXXXXXXXXXXXXPREKFTVTP----SELDPTNMNL 9
                           +EK  ++P     E DP  M L
Sbjct: 453  PMASSDFSSSSSSPTQEKLALSPMSLSCEFDPVQMGL 489


>gb|ADL36701.1| GRF domain class transcription factor [Malus x domestica]
          Length = 600

 Score =  252 bits (643), Expect = 2e-64
 Identities = 135/296 (45%), Positives = 176/296 (59%), Gaps = 6/296 (2%)
 Frame = -2

Query: 986  MHSLFTRCREPFTPSQWLDLELQALIYKYIVANVPVPSHLLYQIRKSLNPFLYVGSSTSY 807
            MH   T  R PFTPSQW++LE QALIYKY+ +NVPVPS+LL  ++K L P+   G S   
Sbjct: 147  MHGPLTGARGPFTPSQWIELEHQALIYKYMTSNVPVPSNLLIPLKKPLYPYGLSGPSN-- 204

Query: 806  APYSFGWAPFRLGLSGSNDPEPGRCRRTDGKKWRCAKEAVPDQKYCERHINRGRHRSRKP 627
             P S  W  + LG SG+NDPEPGRCRRTDGKKWRC+++AV DQKYCERHINRGRHRSRKP
Sbjct: 205  -PTSIAWGAYHLGFSGNNDPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRKP 263

Query: 626  VESRKDLVLAGTNNAMEXXXXXXXXXXXXXXSNGTXXXXXXXXXXXXXXXSNAANP-SAN 450
            VE +    ++GT+N+                +  +               + AANP SA+
Sbjct: 264  VEGQPGQAVSGTSNSKRVPMNSSMSTSVMASNGASNSITTAPQQFKRLQTAVAANPSSAD 323

Query: 449  VVLERVQG----QTIKSPTVDIKSEDTRLSFLPQHVGTEGPPMQEFGLVSSTSLLYTSDK 282
              + R+Q       + +PT+  KS ++      Q    E     EFG+VS+ SLL  S +
Sbjct: 324  AFVNRMQDPRGLSVMSAPTLKPKSNNSTSKLGKQEFLVEESSQSEFGIVSTYSLLNPSHR 383

Query: 281  SSYTDSRNRDVFLSFNKQDAQNEQPLHRFMDDWPKNQSER-LTGWSEEFKSDWTQL 117
            +SY        FL F+ Q+ Q++ PL +FMDDWPK+QS   ++ W EE KSDWTQL
Sbjct: 384  NSYISKDFGGSFLDFSDQETQDQHPLRQFMDDWPKDQSSHSVSTWPEEIKSDWTQL 439


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