BLASTX nr result

ID: Bupleurum21_contig00015565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015565
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853...   111   7e-23
emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]   111   7e-23
gb|ADL36701.1| GRF domain class transcription factor [Malus x do...   110   2e-22
ref|XP_002320668.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_004143409.1| PREDICTED: growth-regulating factor 1-like [...    98   6e-19

>ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853530 [Vitis vinifera]
          Length = 597

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/106 (53%), Positives = 74/106 (69%), Gaps = 9/106 (8%)
 Frame = -3

Query: 295 PLHRFMDDWPKNQSERLTVGWSEELKSDWTQLSMSIPKNST-FSSCSNSP-REKFTVTP- 125
           P  +F+DDWPK+QS R  + W EELKSDWTQLS+SIP +S+ FSS S+SP +EK   +P 
Sbjct: 407 PFRQFIDDWPKDQSNRSDIAWPEELKSDWTQLSISIPMSSSDFSSSSSSPTQEKLAFSPL 466

Query: 124 ---SELDPTNMNLALQYDRS---EKQKSWIPVTWENSLGGPLGEAL 5
               ELDP  M L +  D S   +KQ +WIP++W +S+GGPLGE L
Sbjct: 467 RLSRELDPVQMGLGVSSDLSAPTQKQTNWIPISWGSSMGGPLGEVL 512


>emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]
          Length = 497

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/106 (53%), Positives = 74/106 (69%), Gaps = 9/106 (8%)
 Frame = -3

Query: 295 PLHRFMDDWPKNQSERLTVGWSEELKSDWTQLSMSIPKNST-FSSCSNSP-REKFTVTP- 125
           P  +F+DDWPK+QS R  + W EELKSDWTQLS+SIP +S+ FSS S+SP +EK   +P 
Sbjct: 307 PFRQFIDDWPKDQSNRSDIAWPEELKSDWTQLSISIPMSSSDFSSSSSSPTQEKLAFSPL 366

Query: 124 ---SELDPTNMNLALQYDRS---EKQKSWIPVTWENSLGGPLGEAL 5
               ELDP  M L +  D S   +KQ +WIP++W +S+GGPLGE L
Sbjct: 367 RLSRELDPVQMGLGVSSDLSAPTQKQTNWIPISWGSSMGGPLGEVL 412


>gb|ADL36701.1| GRF domain class transcription factor [Malus x domestica]
          Length = 600

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/106 (54%), Positives = 70/106 (66%), Gaps = 9/106 (8%)
 Frame = -3

Query: 295 PLHRFMDDWPKNQSERLTVGWSEELKSDWTQLSMSIP-KNSTFSSCSNSP-REKFTVTPS 122
           PL +FMDDWPK+QS      W EE+KSDWTQLSMSIP  +S FSS S+SP  EK  ++P 
Sbjct: 408 PLRQFMDDWPKDQSSHSVSTWPEEIKSDWTQLSMSIPMASSEFSSSSSSPTHEKLALSPL 467

Query: 121 ELD----PTNMNLALQYDRSE---KQKSWIPVTWENSLGGPLGEAL 5
            L     P  MNL +  D SE   KQ +WIP+ W NS+GGPLGE +
Sbjct: 468 RLSREFVPAQMNLGMSNDLSESIQKQTNWIPIPWGNSMGGPLGEVI 513


>ref|XP_002320668.1| predicted protein [Populus trichocarpa] gi|222861441|gb|EEE98983.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 9/106 (8%)
 Frame = -3

Query: 295 PLHRFMDDWPKNQSERLTVGWSEELKSDWTQLSMSIP-KNSTFSSCSNSP-REKFTVTP- 125
           PL +F+D+WPK+QS    + W EELKSDWTQLSMSIP  +S FSS S+SP +EK  ++P 
Sbjct: 417 PLRQFIDEWPKDQSNCSVISWPEELKSDWTQLSMSIPMASSDFSSSSSSPTQEKLALSPM 476

Query: 124 ---SELDPTNMNLALQYDR---SEKQKSWIPVTWENSLGGPLGEAL 5
               E DP  M L +  D    S+KQ +WIP++W  S+GGPLGE L
Sbjct: 477 SLSCEFDPVQMGLRVSVDHNESSQKQTNWIPISWGTSIGGPLGEVL 522


>ref|XP_004143409.1| PREDICTED: growth-regulating factor 1-like [Cucumis sativus]
           gi|449499844|ref|XP_004160932.1| PREDICTED:
           growth-regulating factor 1-like [Cucumis sativus]
          Length = 572

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/105 (52%), Positives = 69/105 (65%), Gaps = 8/105 (7%)
 Frame = -3

Query: 295 PLHRFMDDWPKNQSERLTVGWSEELKSDWTQLSMSIPKNSTFSSCSNSP-REKFTVTP-- 125
           PL +F +DWPK+QS R  + W EE KSDWTQLSMSIP  S FSS S+SP  EK   +P  
Sbjct: 421 PLRQFFEDWPKDQSSRSVMTWPEEFKSDWTQLSMSIPM-SDFSSSSSSPTHEKLAQSPLR 479

Query: 124 --SELDPTNMNLALQYDRSE---KQKSWIPVTWENSLGGPLGEAL 5
              EL+P  MNL +  +  E   KQ + I ++W +S+GGPLGEAL
Sbjct: 480 LSRELEPIQMNLGVSRNDGELVQKQGNQITMSWGSSMGGPLGEAL 524


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