BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015544
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis prot...   364   2e-98
ref|XP_002528990.1| conserved hypothetical protein [Ricinus comm...   354   2e-95
gb|AAZ67589.1| 80A08_4 [Brassica rapa subsp. pekinensis]              353   3e-95
ref|XP_004163491.1| PREDICTED: ribosome biogenesis protein TSR3 ...   343   5e-92
ref|XP_004149142.1| PREDICTED: ribosome biogenesis protein TSR3 ...   341   2e-91

>ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
            [Vitis vinifera]
          Length = 302

 Score =  364 bits (935), Expect = 2e-98
 Identities = 195/326 (59%), Positives = 223/326 (68%), Gaps = 15/326 (4%)
 Frame = -3

Query: 1145 MGHNKPRRFKSNNSHRAAGQSSRTHDISRDAESLPIEPET-----------EEQPMVPKI 999
            MGHNK RRFK + SHR  GQSSR  +  R+ +SLP +              EE+  VPK+
Sbjct: 1    MGHNKARRFKGHQSHR--GQSSRFQEPLREYDSLPTDQVAMGFNFCAVAAEEEELSVPKV 58

Query: 998  QLAMWDFGQCDSKKCTGRKLSRFGFLKE----LRVXXXXXXXXXXXXXXXXXXXXNGFGG 831
            QLAMWDFGQCD+K+CTGRKLSRFG LKE    LRV                    +GFGG
Sbjct: 59   QLAMWDFGQCDAKRCTGRKLSRFGLLKESIRLLRVT-------------------SGFGG 99

Query: 830  IVLSPAGTQCVSKEDHTLMNHRGLAVVDCSWARLDDVPFTKLRCVAPRLLPWLVAANPIN 651
            I LSP G QCVSKED+ L+  +GLAVVDCSWARL DVPFTKLRC APRLLPWLVAANP+N
Sbjct: 100  IALSPVGNQCVSKEDYILIKRKGLAVVDCSWARLSDVPFTKLRCAAPRLLPWLVAANPVN 159

Query: 650  YGRPCQLSCVEALSAALIICGEKETAELLLGKFSWGHAFLSLNRELLKSYSKCESSADII 471
            YGRPC+LSCVEALSAAL ICGE+ETA LLLGKF WGHAFLSLNRELLK+YSKCE+ A+II
Sbjct: 160  YGRPCELSCVEALSAALFICGEEETANLLLGKFKWGHAFLSLNRELLKAYSKCENGAEII 219

Query: 470  LVQNAWLSQQSPRVSKGLPDALEADVSRNXXXXXXXXXXXGLPPLEKNSNHIXXXXXXXX 291
             VQNAWLSQQ  +V K LPD      S+N           GLPPLEKN NH+        
Sbjct: 220  SVQNAWLSQQRLQVQKALPDDEAGVSSQNDDEGSCDDSEDGLPPLEKNLNHL-----NLE 274

Query: 290  XXXXXSGLPPLEKNLNRISLDESEDE 213
                  GLPPLEKNLN ++L++ ++E
Sbjct: 275  ESDSEDGLPPLEKNLNHLNLEKGDEE 300


>ref|XP_002528990.1| conserved hypothetical protein [Ricinus communis]
            gi|223531580|gb|EEF33409.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 285

 Score =  354 bits (909), Expect = 2e-95
 Identities = 182/278 (65%), Positives = 214/278 (76%), Gaps = 1/278 (0%)
 Frame = -3

Query: 1145 MGHNKPRRFKSNNSHRAAGQSSRTHDISRDAESLPIEPETEEQP-MVPKIQLAMWDFGQC 969
            MGHNKPRR KS++S+R  GQSSRT+ + R+ ESLP +   EE     P++QLAMWDFGQC
Sbjct: 1    MGHNKPRRSKSHHSNR--GQSSRTNLLEREDESLPSDQVPEEDTNSTPRVQLAMWDFGQC 58

Query: 968  DSKKCTGRKLSRFGFLKELRVXXXXXXXXXXXXXXXXXXXXNGFGGIVLSPAGTQCVSKE 789
            D+K+CTGRKL RFG LKELRV                     GFGGIVLSP G+QCVSK+
Sbjct: 59   DAKRCTGRKLGRFGLLKELRVNC-------------------GFGGIVLSPVGSQCVSKQ 99

Query: 788  DHTLMNHRGLAVVDCSWARLDDVPFTKLRCVAPRLLPWLVAANPINYGRPCQLSCVEALS 609
            DH+L+  +GLAVVDCSWARL+DVPF KLRC APRLLPWLVAANP+NYGRPC+LSCVEALS
Sbjct: 100  DHSLIKRKGLAVVDCSWARLNDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALS 159

Query: 608  AALIICGEKETAELLLGKFSWGHAFLSLNRELLKSYSKCESSADIILVQNAWLSQQSPRV 429
            AALIICGE+ETA+LLL KF WGHAFLSLNRELLK+YS+CE+SADII VQN WLSQQS +V
Sbjct: 160  AALIICGEEETADLLLNKFKWGHAFLSLNRELLKAYSECENSADIISVQNGWLSQQS-KV 218

Query: 428  SKGLPDALEADVSRNXXXXXXXXXXXGLPPLEKNSNHI 315
             K +PD+ EA+ S++           GLPPLE+N NH+
Sbjct: 219  PKAVPDSEEAETSKD--EGSCSDSEDGLPPLERNMNHL 254


>gb|AAZ67589.1| 80A08_4 [Brassica rapa subsp. pekinensis]
          Length = 449

 Score =  353 bits (907), Expect = 3e-95
 Identities = 180/314 (57%), Positives = 223/314 (71%), Gaps = 3/314 (0%)
 Frame = -3

Query: 1145 MGHNKPRRFKSNNSHRAAGQSSRTHDISRDAESLPIEPETEEQPMVPKIQLAMWDFGQCD 966
            MG+ K RR +  NS+   GQ+SRT +I R+ ESLP +P +E++ +VP +QLAMWDFGQCD
Sbjct: 1    MGYGKHRRSRGGNSN--PGQTSRTENIGREDESLPHDPGSEDEAVVPNVQLAMWDFGQCD 58

Query: 965  SKKCTGRKLSRFGFLKELRVXXXXXXXXXXXXXXXXXXXXNGFGGIVLSPAGTQCVSKED 786
            +K+CTGRKL+RF  LKELRV                     GFGG+VLSP G QCVSKED
Sbjct: 59   AKRCTGRKLARFNLLKELRVN-------------------TGFGGVVLSPVGRQCVSKED 99

Query: 785  HTLMNHRGLAVVDCSWARLDDVPFTKLRCVAPRLLPWLVAANPINYGRPCQLSCVEALSA 606
            + L+  RGLAVVDCSWARL DVPF KLRC APRLLPWLVAANP+NYGRPC+LSCVEALSA
Sbjct: 100  YALIKSRGLAVVDCSWARLTDVPFAKLRCTAPRLLPWLVAANPVNYGRPCELSCVEALSA 159

Query: 605  ALIICGEKETAELLLGKFSWGHAFLSLNRELLKSYSKCESSADIILVQNAWLSQQSPRVS 426
            ALI+CGE+ETA LLLGKF WGHAFLSLN+++LK YSKCE+SA+II VQN+WL+QQ+ ++S
Sbjct: 160  ALILCGEEETANLLLGKFKWGHAFLSLNKDILKEYSKCENSAEIISVQNSWLTQQT-QIS 218

Query: 425  KGLPDALEADVSRNXXXXXXXXXXXGLPPLEKNSNHI---XXXXXXXXXXXXXSGLPPLE 255
            K  P  L+  V +            GLPPLE+N NH+                 GLPPLE
Sbjct: 219  K-QPAPLKEHVRKEGDESEDDDEDDGLPPLERNMNHVISEDSEEEDEEEEEEDDGLPPLE 277

Query: 254  KNLNRISLDESEDE 213
            +N+N + L++ E++
Sbjct: 278  RNMNHVKLEDGEED 291


>ref|XP_004163491.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Cucumis sativus]
          Length = 265

 Score =  343 bits (880), Expect = 5e-92
 Identities = 177/277 (63%), Positives = 198/277 (71%)
 Frame = -3

Query: 1145 MGHNKPRRFKSNNSHRAAGQSSRTHDISRDAESLPIEPETEEQPMVPKIQLAMWDFGQCD 966
            M HNK RRFK  N H   GQS+R H    + E LP++P  EE+P  P IQLAMWDFGQCD
Sbjct: 1    MSHNKTRRFK--NHHPRRGQSTRGHKFIGEDECLPVDPANEEEPTRPNIQLAMWDFGQCD 58

Query: 965  SKKCTGRKLSRFGFLKELRVXXXXXXXXXXXXXXXXXXXXNGFGGIVLSPAGTQCVSKED 786
            +K+CTGRKL+RFG LKELRV                    +GFGGIVLSP G  CVSKED
Sbjct: 59   AKRCTGRKLARFGLLKELRVN-------------------SGFGGIVLSPVGVNCVSKED 99

Query: 785  HTLMNHRGLAVVDCSWARLDDVPFTKLRCVAPRLLPWLVAANPINYGRPCQLSCVEALSA 606
            H+L+  +GLAVVDCSWARL DVPF KLRC APRLLPWLVAANP+NYGRPC+LSCVEAL+A
Sbjct: 100  HSLLKQKGLAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAA 159

Query: 605  ALIICGEKETAELLLGKFSWGHAFLSLNRELLKSYSKCESSADIILVQNAWLSQQSPRVS 426
            ALIICGE ETA+LLLGKF WGHAFLS+NRELLK YS CE+SADII VQNAWLSQQ  R  
Sbjct: 160  ALIICGEGETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQ--RQV 217

Query: 425  KGLPDALEADVSRNXXXXXXXXXXXGLPPLEKNSNHI 315
               P  +E   S +           GLPPLEKN NH+
Sbjct: 218  PKEPHNVEDKSSVSEHDEGSDDSEDGLPPLEKNLNHL 254


>ref|XP_004149142.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Cucumis sativus]
          Length = 265

 Score =  341 bits (875), Expect = 2e-91
 Identities = 176/277 (63%), Positives = 197/277 (71%)
 Frame = -3

Query: 1145 MGHNKPRRFKSNNSHRAAGQSSRTHDISRDAESLPIEPETEEQPMVPKIQLAMWDFGQCD 966
            M HNK RRFK  N H   GQS+R H    + E LP++P  EE+P  P I LAMWDFGQCD
Sbjct: 1    MSHNKTRRFK--NHHPRRGQSTRGHKFIGEDECLPVDPANEEEPTRPNIHLAMWDFGQCD 58

Query: 965  SKKCTGRKLSRFGFLKELRVXXXXXXXXXXXXXXXXXXXXNGFGGIVLSPAGTQCVSKED 786
            +K+CTGRKL+RFG LKELRV                    +GFGGIVLSP G  CVSKED
Sbjct: 59   AKRCTGRKLARFGLLKELRVN-------------------SGFGGIVLSPVGVNCVSKED 99

Query: 785  HTLMNHRGLAVVDCSWARLDDVPFTKLRCVAPRLLPWLVAANPINYGRPCQLSCVEALSA 606
            H+L+  +GLAVVDCSWARL DVPF KLRC APRLLPWLVAANP+NYGRPC+LSCVEAL+A
Sbjct: 100  HSLLKQKGLAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAA 159

Query: 605  ALIICGEKETAELLLGKFSWGHAFLSLNRELLKSYSKCESSADIILVQNAWLSQQSPRVS 426
            ALIICGE ETA+LLLGKF WGHAFLS+NRELLK YS CE+SADII VQNAWLSQQ  R  
Sbjct: 160  ALIICGEGETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQ--RQV 217

Query: 425  KGLPDALEADVSRNXXXXXXXXXXXGLPPLEKNSNHI 315
               P  +E   S +           GLPPLEKN NH+
Sbjct: 218  PKEPHNVEDKSSVSEHDEGSDDSEDGLPPLEKNLNHL 254