BLASTX nr result

ID: Bupleurum21_contig00015543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015543
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533247.1| ubiquitin-conjugating enzyme E2 C, putative ...   133   1e-29
ref|XP_003536358.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   133   2e-29
ref|XP_002312020.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_002275915.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   132   4e-29
ref|XP_002315296.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28

>ref|XP_002533247.1| ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis]
           gi|223526927|gb|EEF29132.1| ubiquitin-conjugating enzyme
           E2 C, putative [Ricinus communis]
          Length = 188

 Score =  133 bits (335), Expect = 1e-29
 Identities = 74/112 (66%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   KQGKAPISAVDTNSVTQRLQKELMSLMMSG-DVGVSAFPEGESIXXXXXXXXXXXXXXXX 177
           KQ  A  + VDT SV+QRLQKELMSLMMSG D+GVSAFPEGES                 
Sbjct: 26  KQPAATPNPVDTTSVSQRLQKELMSLMMSGGDLGVSAFPEGES----------------- 68

Query: 178 XXXPEGESIFTWIGTIEGGRGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC 333
                   IFTWIGTIEGG+GT YEGLSYKLSLRFPLDYPFKPPQVKFET C
Sbjct: 69  --------IFTWIGTIEGGKGTAYEGLSYKLSLRFPLDYPFKPPQVKFETNC 112


>ref|XP_003536358.1| PREDICTED: ubiquitin-conjugating enzyme E2 19-like [Glycine max]
          Length = 186

 Score =  133 bits (334), Expect = 2e-29
 Identities = 72/112 (64%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   KQGKAPISAVDTNSVTQRLQKELMSLMMSG-DVGVSAFPEGESIXXXXXXXXXXXXXXXX 177
           KQ     +AVDT++V+QRLQKELM+LMMSG D+GVSAFP+GESI                
Sbjct: 24  KQPLPSPTAVDTSAVSQRLQKELMALMMSGGDLGVSAFPDGESI---------------- 67

Query: 178 XXXPEGESIFTWIGTIEGGRGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC 333
                    FTWIGTIEGG+GT YEGLSYKLSLRFPLDYPFKPPQVKFETMC
Sbjct: 68  ---------FTWIGTIEGGKGTQYEGLSYKLSLRFPLDYPFKPPQVKFETMC 110


>ref|XP_002312020.1| predicted protein [Populus trichocarpa] gi|222851840|gb|EEE89387.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  132 bits (333), Expect = 2e-29
 Identities = 73/112 (65%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   KQGKAPISAVDTNSVTQRLQKELMSLMM-SGDVGVSAFPEGESIXXXXXXXXXXXXXXXX 177
           KQ  AP + VDT SV+QRLQKELMSLMM  GD+GVSAFPEGES                 
Sbjct: 25  KQPVAPSNTVDTASVSQRLQKELMSLMMIGGDLGVSAFPEGES----------------- 67

Query: 178 XXXPEGESIFTWIGTIEGGRGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC 333
                   IF WIGTI GG+GT YEGLSYKLSLRFPLDYPFKPPQVKFETMC
Sbjct: 68  --------IFAWIGTIMGGKGTAYEGLSYKLSLRFPLDYPFKPPQVKFETMC 111


>ref|XP_002275915.1| PREDICTED: ubiquitin-conjugating enzyme E2 19 [Vitis vinifera]
           gi|147800943|emb|CAN75562.1| hypothetical protein
           VITISV_032578 [Vitis vinifera]
           gi|296086039|emb|CBI31480.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score =  132 bits (331), Expect = 4e-29
 Identities = 73/112 (65%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   KQGKAPISAVDTNSVTQRLQKELMSLMMSG-DVGVSAFPEGESIXXXXXXXXXXXXXXXX 177
           KQ KA  + VDT+SV+QRLQKELM+LMMSG D+GVSAFPE ESI                
Sbjct: 28  KQLKAAPNPVDTSSVSQRLQKELMALMMSGGDLGVSAFPESESI---------------- 71

Query: 178 XXXPEGESIFTWIGTIEGGRGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC 333
                    FTWIGTI GG GT+YEGLSYKLSLRFPLDYPFKPPQVKFETMC
Sbjct: 72  ---------FTWIGTIMGGNGTVYEGLSYKLSLRFPLDYPFKPPQVKFETMC 114


>ref|XP_002315296.1| predicted protein [Populus trichocarpa] gi|222864336|gb|EEF01467.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  129 bits (324), Expect = 2e-28
 Identities = 70/112 (62%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   KQGKAPISAVDTNSVTQRLQKELMSLMM-SGDVGVSAFPEGESIXXXXXXXXXXXXXXXX 177
           KQ   P + V+T SV+QRLQKELMSLMM  GD+GVSAFPEGES                 
Sbjct: 25  KQPVVPPNTVETTSVSQRLQKELMSLMMIGGDLGVSAFPEGES----------------- 67

Query: 178 XXXPEGESIFTWIGTIEGGRGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC 333
                   IF WIGTI GG GT YEGLSYKLSLRFPLDYPFKPPQ+KFETMC
Sbjct: 68  --------IFAWIGTIAGGEGTAYEGLSYKLSLRFPLDYPFKPPQIKFETMC 111


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