BLASTX nr result

ID: Bupleurum21_contig00015540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015540
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18352.3| unnamed protein product [Vitis vinifera]              205   4e-51
ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   205   4e-51
ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   204   8e-51
ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   204   8e-51
ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   204   8e-51

>emb|CBI18352.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  205 bits (521), Expect = 4e-51
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = +1

Query: 1   KAVDRAGYYAPSPIQMAAIPLGLQQRDVIGVADTGSGKTSAYVLPMLTYITRLPPISEEN 180
           KAV+RAGY  PSPIQMAAIPLGLQQRDVIG+A+TGSGKT+A+VLPMLTYI+RLPPISEEN
Sbjct: 223 KAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEEN 282

Query: 181 VADGPYAVVMAPTTVVAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFKIRQGC 345
            A+GPYAVVMAPT  +AQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGF+IRQGC
Sbjct: 283 EAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGC 337


>ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 709

 Score =  205 bits (521), Expect = 4e-51
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = +1

Query: 1   KAVDRAGYYAPSPIQMAAIPLGLQQRDVIGVADTGSGKTSAYVLPMLTYITRLPPISEEN 180
           KAV+RAGY  PSPIQMAAIPLGLQQRDVIG+A+TGSGKT+A+VLPMLTYI+RLPPISEEN
Sbjct: 302 KAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEEN 361

Query: 181 VADGPYAVVMAPTTVVAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFKIRQGC 345
            A+GPYAVVMAPT  +AQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGF+IRQGC
Sbjct: 362 EAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGC 416


>ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           21-like [Cucumis sativus]
          Length = 715

 Score =  204 bits (518), Expect = 8e-51
 Identities = 100/115 (86%), Positives = 110/115 (95%)
 Frame = +1

Query: 1   KAVDRAGYYAPSPIQMAAIPLGLQQRDVIGVADTGSGKTSAYVLPMLTYITRLPPISEEN 180
           KAV+RAGY +PSPIQMAAIPLGLQQRDVIG+A+TGSGKT+A+VLPML YITRLPPI+EEN
Sbjct: 308 KAVERAGYKSPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLPPINEEN 367

Query: 181 VADGPYAVVMAPTTVVAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFKIRQGC 345
            A+GPYAVVMAPT  +AQQIEDETVKF+HYLGIKVVSIVGGQSIEEQGFKIRQGC
Sbjct: 368 EAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQGC 422


>ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cucumis
           sativus]
          Length = 715

 Score =  204 bits (518), Expect = 8e-51
 Identities = 100/115 (86%), Positives = 110/115 (95%)
 Frame = +1

Query: 1   KAVDRAGYYAPSPIQMAAIPLGLQQRDVIGVADTGSGKTSAYVLPMLTYITRLPPISEEN 180
           KAV+RAGY +PSPIQMAAIPLGLQQRDVIG+A+TGSGKT+A+VLPML YITRLPPI+EEN
Sbjct: 308 KAVERAGYKSPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLPPINEEN 367

Query: 181 VADGPYAVVMAPTTVVAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFKIRQGC 345
            A+GPYAVVMAPT  +AQQIEDETVKF+HYLGIKVVSIVGGQSIEEQGFKIRQGC
Sbjct: 368 EAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQGC 422


>ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 712

 Score =  204 bits (518), Expect = 8e-51
 Identities = 100/115 (86%), Positives = 110/115 (95%)
 Frame = +1

Query: 1   KAVDRAGYYAPSPIQMAAIPLGLQQRDVIGVADTGSGKTSAYVLPMLTYITRLPPISEEN 180
           KAV+RAGY  PSPIQMAAIPLGLQQRDVIG+A+TGSGKT+A+VLPMLTYI+RLPP+SEEN
Sbjct: 305 KAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPMSEEN 364

Query: 181 VADGPYAVVMAPTTVVAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFKIRQGC 345
            A+GPYAVVMAPT  +AQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGF+IRQGC
Sbjct: 365 EAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGC 419


Top