BLASTX nr result

ID: Bupleurum21_contig00015508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015508
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234184.1| auxin efflux facilitator SlPIN4 [Solanum lyc...   182   2e-44
dbj|BAJ09455.1| auxin efflux carrier [Solanum lycopersicum]           182   2e-44
ref|XP_002526018.1| Auxin efflux carrier component, putative [Ri...   178   4e-43
emb|CBI26909.3| unnamed protein product [Vitis vinifera]              177   8e-43
ref|XP_002284319.1| PREDICTED: auxin efflux carrier component 3 ...   177   8e-43

>ref|NP_001234184.1| auxin efflux facilitator SlPIN4 [Solanum lycopersicum]
           gi|312983228|gb|ADR30410.1| auxin efflux facilitator
           SlPIN4 [Solanum lycopersicum]
          Length = 653

 Score =  182 bits (463), Expect = 2e-44
 Identities = 94/117 (80%), Positives = 101/117 (86%)
 Frame = -3

Query: 502 GAKDNNNGDHEEREKDGPHGLSKLGSSSTTELHPKGAAGAHDIGAGKHMPPASVMTRLIL 323
           G KD   GD E+ EK+GP GL+KLGSSST+ELHPK  AG  D G GK MPPASVMTRLIL
Sbjct: 442 GGKD---GDEEKGEKEGPTGLTKLGSSSTSELHPK-LAGVQDAGMGKQMPPASVMTRLIL 497

Query: 322 IMVWRKLIRNPNTYSSLVGLIWSLVSFKWDVAMPKIIEKSISILSDAGLGMAMFSLG 152
           IMVWRKLIRNPNTYSSL+GLIWSL+SF+W V MPKIIEKSISILSDAGLGMAMFSLG
Sbjct: 498 IMVWRKLIRNPNTYSSLIGLIWSLISFRWHVHMPKIIEKSISILSDAGLGMAMFSLG 554


>dbj|BAJ09455.1| auxin efflux carrier [Solanum lycopersicum]
          Length = 653

 Score =  182 bits (463), Expect = 2e-44
 Identities = 94/117 (80%), Positives = 101/117 (86%)
 Frame = -3

Query: 502 GAKDNNNGDHEEREKDGPHGLSKLGSSSTTELHPKGAAGAHDIGAGKHMPPASVMTRLIL 323
           G KD   GD E+ EK+GP GL+KLGSSST+ELHPK  AG  D G GK MPPASVMTRLIL
Sbjct: 442 GGKD---GDEEKGEKEGPTGLTKLGSSSTSELHPK-LAGVQDAGMGKQMPPASVMTRLIL 497

Query: 322 IMVWRKLIRNPNTYSSLVGLIWSLVSFKWDVAMPKIIEKSISILSDAGLGMAMFSLG 152
           IMVWRKLIRNPNTYSSL+GLIWSL+SF+W V MPKIIEKSISILSDAGLGMAMFSLG
Sbjct: 498 IMVWRKLIRNPNTYSSLIGLIWSLISFRWHVHMPKIIEKSISILSDAGLGMAMFSLG 554


>ref|XP_002526018.1| Auxin efflux carrier component, putative [Ricinus communis]
           gi|223534665|gb|EEF36358.1| Auxin efflux carrier
           component, putative [Ricinus communis]
          Length = 646

 Score =  178 bits (452), Expect = 4e-43
 Identities = 87/111 (78%), Positives = 99/111 (89%)
 Frame = -3

Query: 484 NGDHEEREKDGPHGLSKLGSSSTTELHPKGAAGAHDIGAGKHMPPASVMTRLILIMVWRK 305
           +G+ +EREKDGP GL+KLGSSST ELHPK   GA + G  K MPPASVMTRLILIMVWRK
Sbjct: 438 DGEDDEREKDGPTGLNKLGSSSTAELHPK-VVGAPETGVNKQMPPASVMTRLILIMVWRK 496

Query: 304 LIRNPNTYSSLVGLIWSLVSFKWDVAMPKIIEKSISILSDAGLGMAMFSLG 152
           LIRNPNTYSSL+GL+WSL++F+WDVAMP II++SISILSDAGLGMAMFSLG
Sbjct: 497 LIRNPNTYSSLIGLVWSLIAFRWDVAMPAIIKQSISILSDAGLGMAMFSLG 547


>emb|CBI26909.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/107 (82%), Positives = 98/107 (91%)
 Frame = -3

Query: 472 EEREKDGPHGLSKLGSSSTTELHPKGAAGAHDIGAGKHMPPASVMTRLILIMVWRKLIRN 293
           EEREK+GP GLSKLGSSST ELHPK   GA + GAGK MPPASVMTRLILIMVWRKLIRN
Sbjct: 83  EEREKEGPIGLSKLGSSSTAELHPK-MLGAPESGAGKQMPPASVMTRLILIMVWRKLIRN 141

Query: 292 PNTYSSLVGLIWSLVSFKWDVAMPKIIEKSISILSDAGLGMAMFSLG 152
           PNTYSSL+GL+WSL++++WDVAMP II++SISILSDAGLGMAMFSLG
Sbjct: 142 PNTYSSLIGLVWSLIAYRWDVAMPTIIKQSISILSDAGLGMAMFSLG 188


>ref|XP_002284319.1| PREDICTED: auxin efflux carrier component 3 isoform 4 [Vitis
           vinifera]
          Length = 629

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/107 (82%), Positives = 98/107 (91%)
 Frame = -3

Query: 472 EEREKDGPHGLSKLGSSSTTELHPKGAAGAHDIGAGKHMPPASVMTRLILIMVWRKLIRN 293
           EEREK+GP GLSKLGSSST ELHPK   GA + GAGK MPPASVMTRLILIMVWRKLIRN
Sbjct: 425 EEREKEGPIGLSKLGSSSTAELHPK-MLGAPESGAGKQMPPASVMTRLILIMVWRKLIRN 483

Query: 292 PNTYSSLVGLIWSLVSFKWDVAMPKIIEKSISILSDAGLGMAMFSLG 152
           PNTYSSL+GL+WSL++++WDVAMP II++SISILSDAGLGMAMFSLG
Sbjct: 484 PNTYSSLIGLVWSLIAYRWDVAMPTIIKQSISILSDAGLGMAMFSLG 530


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