BLASTX nr result

ID: Bupleurum21_contig00015506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015506
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   318   6e-85
emb|CBI23583.3| unnamed protein product [Vitis vinifera]              316   2e-84
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   312   4e-83
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]   307   1e-81
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   301   1e-79

>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Vitis vinifera]
          Length = 1224

 Score =  318 bits (815), Expect = 6e-85
 Identities = 162/233 (69%), Positives = 186/233 (79%), Gaps = 2/233 (0%)
 Frame = +1

Query: 1    YASFYIHRSLFTEVSTASWKLDAPSNIDSTIYPLLTLFKLLKIKAYQEADFTPDELQSRK 180
            Y SFYIH+S+FTE + +SW+LDA  NIDST+YPL TLFKLL+IK +QEA+FTP+EL SRK
Sbjct: 433  YVSFYIHQSVFTEGNKSSWRLDAAPNIDSTVYPLPTLFKLLQIKPFQEAEFTPEELDSRK 492

Query: 181  RGLNLDCDANEFVGMLPVLKQGKGCQI--NQDKDEQAVLESSLNKLVGAADVYNLEEMEP 354
            R LNL+ D +E   MLP++KQ KGCQ    Q+ DEQA+ ESSLNKLVGAAD YNLEEME 
Sbjct: 493  RKLNLEGDTDEAPSMLPIVKQKKGCQQYPEQNNDEQALSESSLNKLVGAADQYNLEEMES 552

Query: 355  PSTLMCDLRPYQKQALYWMTELEKGIDAEKATKTLHPCWAAYRICDGRASSIHVNVFSGE 534
            PSTLMCDLRPYQKQALYWM+ELEKG DAE+A KTLHPCWAAY+ICD RAS+I+VN+FSGE
Sbjct: 553  PSTLMCDLRPYQKQALYWMSELEKGSDAEQAPKTLHPCWAAYQICDERASAIYVNIFSGE 612

Query: 535  XXXXXXXXXXXXRGGILADAMGLGKTVMTIALILARPGRGIPDAKNNVPKAAD 693
                        RGGILADAMGLGKTVMTIALILARPGR        + +AAD
Sbjct: 613  ATTQLPTAIHMARGGILADAMGLGKTVMTIALILARPGRRSSGVHKLLTEAAD 665


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  316 bits (810), Expect = 2e-84
 Identities = 159/219 (72%), Positives = 181/219 (82%), Gaps = 2/219 (0%)
 Frame = +1

Query: 1    YASFYIHRSLFTEVSTASWKLDAPSNIDSTIYPLLTLFKLLKIKAYQEADFTPDELQSRK 180
            Y SFYIH+S+FTE + +SW+LDA  NIDST+YPL TLFKLL+IK +QEA+FTP+EL SRK
Sbjct: 433  YVSFYIHQSVFTEGNKSSWRLDAAPNIDSTVYPLPTLFKLLQIKPFQEAEFTPEELDSRK 492

Query: 181  RGLNLDCDANEFVGMLPVLKQGKGCQI--NQDKDEQAVLESSLNKLVGAADVYNLEEMEP 354
            R LNL+ D +E   MLP++KQ KGCQ    Q+ DEQA+ ESSLNKLVGAAD YNLEEME 
Sbjct: 493  RKLNLEGDTDEAPSMLPIVKQKKGCQQYPEQNNDEQALSESSLNKLVGAADQYNLEEMES 552

Query: 355  PSTLMCDLRPYQKQALYWMTELEKGIDAEKATKTLHPCWAAYRICDGRASSIHVNVFSGE 534
            PSTLMCDLRPYQKQALYWM+ELEKG DAE+A KTLHPCWAAY+ICD RAS+I+VN+FSGE
Sbjct: 553  PSTLMCDLRPYQKQALYWMSELEKGSDAEQAPKTLHPCWAAYQICDERASAIYVNIFSGE 612

Query: 535  XXXXXXXXXXXXRGGILADAMGLGKTVMTIALILARPGR 651
                        RGGILADAMGLGKTVMTIALILARPGR
Sbjct: 613  ATTQLPTAIHMARGGILADAMGLGKTVMTIALILARPGR 651


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1051

 Score =  312 bits (800), Expect = 4e-83
 Identities = 156/227 (68%), Positives = 181/227 (79%), Gaps = 2/227 (0%)
 Frame = +1

Query: 1   YASFYIHRSLFTEVSTASWKLDAPSNIDSTIYPLLTLFKLLKIKAYQEADFTPDELQSRK 180
           Y SFYIH S+FTE+  ++W+L+A SN DSTIYPLLTLFKLLKI  YQ+A+FTP+EL SRK
Sbjct: 282 YVSFYIHSSIFTELDKSTWRLEAHSNADSTIYPLLTLFKLLKIGPYQKAEFTPEELDSRK 341

Query: 181 RGLNLDCDANEFVGMLPVLKQGKGCQ--INQDKDEQAVLESSLNKLVGAADVYNLEEMEP 354
           R LNL  +A     MLP++K+  GCQ  + Q+KDEQA+LESSLNKLVGA D YNLEEMEP
Sbjct: 342 RSLNLQDEAG---AMLPIVKRRMGCQQYLEQNKDEQAILESSLNKLVGAVDTYNLEEMEP 398

Query: 355 PSTLMCDLRPYQKQALYWMTELEKGIDAEKATKTLHPCWAAYRICDGRASSIHVNVFSGE 534
           P TLMC LR YQKQALYWM+E EKGID EKA KTLHPCWAAYRICD RASSI++N+FSGE
Sbjct: 399 PHTLMCSLRSYQKQALYWMSECEKGIDVEKAAKTLHPCWAAYRICDARASSIYLNIFSGE 458

Query: 535 XXXXXXXXXXXXRGGILADAMGLGKTVMTIALILARPGRGIPDAKNN 675
                       RGGILADAMGLGKTVMTI+LILARPG+G  D++ +
Sbjct: 459 ATTQFPTATQMARGGILADAMGLGKTVMTISLILARPGKGSIDSQES 505


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score =  307 bits (786), Expect = 1e-81
 Identities = 161/250 (64%), Positives = 186/250 (74%), Gaps = 19/250 (7%)
 Frame = +1

Query: 1    YASFYIHRSLFTEVSTASWKLDAPSNIDSTIYPLLTLFKLLKIKAYQEADFTPDELQSRK 180
            Y SFYIH+S+FTE + +SW+LDA  NIDST+YPL TLFKLL+IK +QEA+FTP+EL SRK
Sbjct: 433  YVSFYIHQSVFTEGNKSSWRLDAAPNIDSTVYPLPTLFKLLQIKPFQEAEFTPEELDSRK 492

Query: 181  RGLNLDCDANEFVGMLPVLKQGKGCQI--NQDKDEQAVLESSLNKLVGAADVYNLEEMEP 354
            R LNL+ D +E   MLP++KQ KGCQ    Q+ DEQA+ ESSLNKLVGAAD YNLEEME 
Sbjct: 493  RKLNLEGDTDEAPSMLPIVKQKKGCQQYPEQNNDEQALSESSLNKLVGAADQYNLEEMES 552

Query: 355  PSTLMCDLRPYQKQALYWMTELEKGIDAEKATKTLHPCWAAYRICD-------------- 492
            PST+MCDLRPYQKQALYWM+ELEKG DAE+A KTLHPCWAAY+ICD              
Sbjct: 553  PSTJMCDLRPYQKQALYWMSELEKGSDAEQAPKTLHPCWAAYQICDEVWHIGFGEIALTM 612

Query: 493  ---GRASSIHVNVFSGEXXXXXXXXXXXXRGGILADAMGLGKTVMTIALILARPGRGIPD 663
                RAS+I+VN+FSGE            RGGILADAMGLGKTVMTIALILARPGR    
Sbjct: 613  LHGRRASAIYVNIFSGEATTQLPTAIHMARGGILADAMGLGKTVMTIALILARPGRRSSG 672

Query: 664  AKNNVPKAAD 693
                + +AAD
Sbjct: 673  VHKLLTEAAD 682


>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Cucumis sativus]
           gi|449523563|ref|XP_004168793.1| PREDICTED: putative
           SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 3-like
           [Cucumis sativus]
          Length = 1113

 Score =  301 bits (770), Expect = 1e-79
 Identities = 150/223 (67%), Positives = 180/223 (80%), Gaps = 2/223 (0%)
 Frame = +1

Query: 1   YASFYIHRSLFTEVSTASWKLDAPSNIDSTIYPLLTLFKLLKIKAYQEADFTPDELQSRK 180
           Y SFYIH S+F+++ T +WKL+A ++IDSTIYPLLTLFKLLKI  YQ+A+FTP+EL SRK
Sbjct: 329 YVSFYIHNSVFSDIDTVTWKLEA-THIDSTIYPLLTLFKLLKITPYQKAEFTPEELDSRK 387

Query: 181 RGLNLDCDANEFVGMLPVLKQGKGCQ--INQDKDEQAVLESSLNKLVGAADVYNLEEMEP 354
           R L L+ D +E   MLP++K+ KG Q   +Q+KD+Q + ESSL KLVGA D+YNL+EMEP
Sbjct: 388 RLLKLEDDPDESTSMLPLVKRRKGSQQFADQNKDDQTLNESSLTKLVGAVDMYNLDEMEP 447

Query: 355 PSTLMCDLRPYQKQALYWMTELEKGIDAEKATKTLHPCWAAYRICDGRASSIHVNVFSGE 534
           P TL CDLRPYQKQAL+WM+ELEKGID EKA +TLHPCW+AYRICD RA+SI+VN+FSGE
Sbjct: 448 PPTLTCDLRPYQKQALFWMSELEKGIDVEKAAQTLHPCWSAYRICDERATSIYVNIFSGE 507

Query: 535 XXXXXXXXXXXXRGGILADAMGLGKTVMTIALILARPGRGIPD 663
                       RGGILADAMGLGKTVMTIALILAR G+G PD
Sbjct: 508 STTKFPTATQMARGGILADAMGLGKTVMTIALILARMGKGCPD 550


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