BLASTX nr result

ID: Bupleurum21_contig00015248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015248
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321070.1| predicted protein [Populus trichocarpa] gi|2...    61   7e-08
ref|XP_003599925.1| Actin-related protein 2/3 complex subunit [M...    61   7e-08
gb|AFP72374.1| actin-related protein component 1 [Lotus japonicus]     60   2e-07
ref|XP_003551905.1| PREDICTED: actin-related protein 2/3 complex...    60   2e-07
ref|NP_001242474.1| uncharacterized protein LOC100789138 [Glycin...    60   2e-07

>ref|XP_002321070.1| predicted protein [Populus trichocarpa] gi|222861843|gb|EEE99385.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 60.8 bits (146), Expect(2) = 7e-08
 Identities = 25/29 (86%), Positives = 29/29 (100%)
 Frame = -3

Query: 289 ILFVSERMVIGVGYDCNPMVFAADERGLW 203
           +LFVSE+MVIGVG+DCNPMVFAADERG+W
Sbjct: 253 VLFVSEKMVIGVGFDCNPMVFAADERGIW 281



 Score = 20.4 bits (41), Expect(2) = 7e-08
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 314 RDLPLRDV 291
           RDLPLRDV
Sbjct: 246 RDLPLRDV 253


>ref|XP_003599925.1| Actin-related protein 2/3 complex subunit [Medicago truncatula]
           gi|355488973|gb|AES70176.1| Actin-related protein 2/3
           complex subunit [Medicago truncatula]
          Length = 375

 Score = 60.8 bits (146), Expect(2) = 7e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -3

Query: 289 ILFVSERMVIGVGYDCNPMVFAADERGLW 203
           +LFVSER VIGVGYDCNPMVFAADERG+W
Sbjct: 252 VLFVSERTVIGVGYDCNPMVFAADERGVW 280



 Score = 20.4 bits (41), Expect(2) = 7e-08
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 314 RDLPLRDV 291
           RDLPLRDV
Sbjct: 245 RDLPLRDV 252


>gb|AFP72374.1| actin-related protein component 1 [Lotus japonicus]
          Length = 376

 Score = 59.7 bits (143), Expect(2) = 2e-07
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = -3

Query: 289 ILFVSERMVIGVGYDCNPMVFAADERGLW 203
           +LFVSER VIGVG+DCNPMVFAADERG+W
Sbjct: 253 VLFVSERTVIGVGFDCNPMVFAADERGIW 281



 Score = 20.4 bits (41), Expect(2) = 2e-07
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 314 RDLPLRDV 291
           RDLPLRDV
Sbjct: 246 RDLPLRDV 253


>ref|XP_003551905.1| PREDICTED: actin-related protein 2/3 complex subunit 1-like
           [Glycine max]
          Length = 376

 Score = 59.7 bits (143), Expect(2) = 2e-07
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = -3

Query: 289 ILFVSERMVIGVGYDCNPMVFAADERGLW 203
           +LFVSER VIGVG+DCNPMVFAADERG+W
Sbjct: 253 VLFVSERKVIGVGFDCNPMVFAADERGIW 281



 Score = 20.4 bits (41), Expect(2) = 2e-07
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 314 RDLPLRDV 291
           RDLPLRDV
Sbjct: 246 RDLPLRDV 253


>ref|NP_001242474.1| uncharacterized protein LOC100789138 [Glycine max]
           gi|255636878|gb|ACU18772.1| unknown [Glycine max]
          Length = 376

 Score = 59.7 bits (143), Expect(2) = 2e-07
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = -3

Query: 289 ILFVSERMVIGVGYDCNPMVFAADERGLW 203
           +LFVSER VIGVG+DCNPMVFAADERG+W
Sbjct: 253 VLFVSERKVIGVGFDCNPMVFAADERGIW 281



 Score = 20.4 bits (41), Expect(2) = 2e-07
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 314 RDLPLRDV 291
           RDLPLRDV
Sbjct: 246 RDLPLRDV 253


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