BLASTX nr result

ID: Bupleurum21_contig00015173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015173
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling co...   358   1e-96
ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling co...   355   1e-95
ref|NP_001241294.1| chromatin structure-remodeling complex prote...   343   5e-92
gb|ABF85669.1| SNF5 [Pisum sativum]                                   339   7e-91
ref|XP_002519347.1| snf5, putative [Ricinus communis] gi|2235416...   338   9e-91

>ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling complex protein BSH
           [Vitis vinifera] gi|297736833|emb|CBI26034.3| unnamed
           protein product [Vitis vinifera]
          Length = 243

 Score =  358 bits (918), Expect = 1e-96
 Identities = 180/237 (75%), Positives = 198/237 (83%)
 Frame = +3

Query: 102 SSSKTPVKFRIPTADNLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLP 281
           +SSK PVKFR+PTADNLVPIRLDIEIDG RF+DAFTWNPSDPDSEVVVFAKRTVKDLKLP
Sbjct: 7   TSSKNPVKFRMPTADNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLP 66

Query: 282 PAFVTQIAQSIQSQLTDFRSYEGQDMYTGEKIVPIKLDLRVNHTLIKDQFLWDLNNFESD 461
           PAF+TQIAQSIQSQL +FRS+EGQDM TGEKIVPIKLDLRVNHTLIKDQFLWDLNNFESD
Sbjct: 67  PAFITQIAQSIQSQLAEFRSFEGQDMQTGEKIVPIKLDLRVNHTLIKDQFLWDLNNFESD 126

Query: 462 PEQFARTFCKDLGIEDPEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXIAIQNVSTARESR 641
           PE+FARTFCKDLG+EDPEVG                           IAIQ+V++ARE+R
Sbjct: 127 PEEFARTFCKDLGVEDPEVG--------------PAIAVAIREQLYEIAIQSVTSARETR 172

Query: 642 ISKKGRRGFEHSLPSKAGGTGLDLMKLYGFRSSVVRKRKEWEVYEPIVDFLSNEEVD 812
           ISKKGRRG EH   SKA GT LDLMKL+G +SS++RKR+EW+VYEPIVD LSNEEVD
Sbjct: 173 ISKKGRRGAEHIPASKASGTALDLMKLFGNKSSIIRKRREWDVYEPIVDILSNEEVD 229


>ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling complex protein BSH-like
           [Cucumis sativus] gi|449498785|ref|XP_004160633.1|
           PREDICTED: chromatin structure-remodeling complex
           protein BSH-like [Cucumis sativus]
          Length = 240

 Score =  355 bits (910), Expect = 1e-95
 Identities = 176/235 (74%), Positives = 197/235 (83%)
 Frame = +3

Query: 108 SKTPVKFRIPTADNLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPA 287
           SK P KFRIPTA+NLVPIRLDIEIDGQRF+DAFTWNPSDPDSEVVVFAKRTVKDLKLPPA
Sbjct: 9   SKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPA 68

Query: 288 FVTQIAQSIQSQLTDFRSYEGQDMYTGEKIVPIKLDLRVNHTLIKDQFLWDLNNFESDPE 467
           F+TQIAQSIQSQLT+FRS+EGQDMYTGEKI+PIKLDLRVN+TLIKDQFLWDLNN+ESDPE
Sbjct: 69  FITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPE 128

Query: 468 QFARTFCKDLGIEDPEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXIAIQNVSTARESRIS 647
           +F+RT CKDLGI+DPEVG                           IA+QNV++ARESR+S
Sbjct: 129 EFSRTLCKDLGIDDPEVG--------------PAIAVAIREQLYEIAVQNVASARESRMS 174

Query: 648 KKGRRGFEHSLPSKAGGTGLDLMKLYGFRSSVVRKRKEWEVYEPIVDFLSNEEVD 812
           KKGRRGFEH   SK GG  +DL+KL+G RSSVVRKRK+W++YEPIVD LSNEEVD
Sbjct: 175 KKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVD 229


>ref|NP_001241294.1| chromatin structure-remodeling complex protein BSH-like [Glycine
           max] gi|296932945|gb|ADH93593.1| SNF5-type
           chromatin-remodeling complex protein [Glycine max]
           gi|297179845|gb|ADI23919.1| SNF5 [Glycine max]
          Length = 240

 Score =  343 bits (879), Expect = 5e-92
 Identities = 173/234 (73%), Positives = 193/234 (82%)
 Frame = +3

Query: 111 KTPVKFRIPTADNLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF 290
           + PVKFR+PTA+NLVPIRLDIEI+GQR++DAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF
Sbjct: 10  RNPVKFRMPTAENLVPIRLDIEIEGQRYKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF 69

Query: 291 VTQIAQSIQSQLTDFRSYEGQDMYTGEKIVPIKLDLRVNHTLIKDQFLWDLNNFESDPEQ 470
           VTQIAQSIQSQL++FRSYEGQDMY GEKIVPIKLDLRVNHTL+KDQFLWDLNNFESDPE+
Sbjct: 70  VTQIAQSIQSQLSEFRSYEGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDLNNFESDPEE 129

Query: 471 FARTFCKDLGIEDPEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXIAIQNVSTARESRISK 650
           FAR FCKD GIEDPEVG                           IAIQ+V +ARESR+SK
Sbjct: 130 FARIFCKDTGIEDPEVG--------------PAIAFAIREQLYEIAIQSVVSARESRMSK 175

Query: 651 KGRRGFEHSLPSKAGGTGLDLMKLYGFRSSVVRKRKEWEVYEPIVDFLSNEEVD 812
           KGRRG E++  SK G   +DL+KL+G +SSVVRKRKEW+VYEPIVD LSNEEVD
Sbjct: 176 KGRRGAEYTPVSKGGAAAVDLVKLFGPKSSVVRKRKEWDVYEPIVDLLSNEEVD 229


>gb|ABF85669.1| SNF5 [Pisum sativum]
          Length = 240

 Score =  339 bits (869), Expect = 7e-91
 Identities = 167/234 (71%), Positives = 191/234 (81%)
 Frame = +3

Query: 111 KTPVKFRIPTADNLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF 290
           + PVKFR+PT++NLVP+RLDIEIDG R++DAFTWNPSDPDSEVVVFAKRTVKDLKLPP F
Sbjct: 10  RNPVKFRMPTSENLVPVRLDIEIDGHRYKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPPF 69

Query: 291 VTQIAQSIQSQLTDFRSYEGQDMYTGEKIVPIKLDLRVNHTLIKDQFLWDLNNFESDPEQ 470
           VTQIAQSIQSQL +FRSYEGQDMY GEKI+PIKLDLRVNHTL+KDQFLWDLNNF+SDPE+
Sbjct: 70  VTQIAQSIQSQLAEFRSYEGQDMYAGEKIIPIKLDLRVNHTLVKDQFLWDLNNFDSDPEE 129

Query: 471 FARTFCKDLGIEDPEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXIAIQNVSTARESRISK 650
           FARTFC+D+GIEDPEVG                           IAIQ+V +ARESR+SK
Sbjct: 130 FARTFCRDMGIEDPEVG--------------PAVAFAIREQLYEIAIQSVVSARESRLSK 175

Query: 651 KGRRGFEHSLPSKAGGTGLDLMKLYGFRSSVVRKRKEWEVYEPIVDFLSNEEVD 812
           KGRRG + +  SK G   +DL+KL+G +SSVVRKRKEW+VYEPIVD LSNEEVD
Sbjct: 176 KGRRGADFTPVSKGGAVAVDLVKLFGIKSSVVRKRKEWDVYEPIVDLLSNEEVD 229


>ref|XP_002519347.1| snf5, putative [Ricinus communis] gi|223541662|gb|EEF43211.1| snf5,
           putative [Ricinus communis]
          Length = 241

 Score =  338 bits (868), Expect = 9e-91
 Identities = 174/244 (71%), Positives = 192/244 (78%)
 Frame = +3

Query: 81  MKSHGLWSSSKTPVKFRIPTADNLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRT 260
           MK     SSSK PVKFR+PTA NLVPIRLDIEIDG RF+DAFTWNPSDPDSEVVVFAKRT
Sbjct: 1   MKGLPSTSSSKLPVKFRMPTAQNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRT 60

Query: 261 VKDLKLPPAFVTQIAQSIQSQLTDFRSYEGQDMYTGEKIVPIKLDLRVNHTLIKDQFLWD 440
            KDLKLPPAFV QIAQSIQ+QL++FRSYEGQDM+TGEK VPIKLDLRVN TLIKDQFLWD
Sbjct: 61  AKDLKLPPAFVMQIAQSIQTQLSEFRSYEGQDMFTGEKFVPIKLDLRVNRTLIKDQFLWD 120

Query: 441 LNNFESDPEQFARTFCKDLGIEDPEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXIAIQNV 620
           LNNF+SDPE FA TFCKDLGI+DPEV                            IA Q+V
Sbjct: 121 LNNFDSDPEDFATTFCKDLGIQDPEVA--------------PAVAFAIREQLYEIATQSV 166

Query: 621 STARESRISKKGRRGFEHSLPSKAGGTGLDLMKLYGFRSSVVRKRKEWEVYEPIVDFLSN 800
           +TARESR++KKGRRGFE+   SKAGGT  DLMKL+  R S++RKRKEW+VYEPIVD LSN
Sbjct: 167 ATARESRLTKKGRRGFEYIPASKAGGTASDLMKLFSNRYSMIRKRKEWDVYEPIVDLLSN 226

Query: 801 EEVD 812
           EEV+
Sbjct: 227 EEVE 230


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