BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014743
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   104   7e-21
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]        98   6e-19
ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
gb|ABU45189.1| unknown [Capsicum frutescens]                           91   7e-17
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...    89   4e-16

>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 677

 Score =  104 bits (260), Expect = 7e-21
 Identities = 58/133 (43%), Positives = 80/133 (60%), Gaps = 16/133 (12%)
 Frame = +3

Query: 6   PCRSGYAIGVLIGNKLHLNPVCSAMQLRPSLRHLRSVDVVMEEKPVVN---KLEDSRDD- 173
           P  +GYA+GVLIGNKLHLNP+ + +QLRPSL H+ S D   +    +N   KLEDS +  
Sbjct: 201 PRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRKNSATLNPEVKLEDSNEGK 260

Query: 174 ---------WIRLSYNGARTDAAREYLHKMMAEEDSQIQFSMSSSDYVESFCPRLPN--- 317
                    WI L Y+G+++D +  YL KM+A+E S ++F+M+  DY+ S CP   N   
Sbjct: 261 PIGSSKKQCWISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKT 320

Query: 318 RHAGPSRSELLKL 356
           +  GP R  LL L
Sbjct: 321 KSKGPPRRFLLSL 333


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 30/141 (21%)
 Frame = +3

Query: 6   PCRSGYAIGVLIGNKLHLNPVCSAMQLRPSLRHLR--------SVDVVMEEK-------- 137
           P  +GYA+GVL+GNKLHLNP+ + +QLRPS++H +        +    +E+         
Sbjct: 192 PVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSNLEDNTKGEEVTT 251

Query: 138 -----------PVVNKLEDSRDDWIRLSYNGARTDAAREYLHKMMAEEDSQIQFSMSSSD 284
                      PV+ + +D+R+DWI L+Y+GAR+D +  Y+ KM+  + S IQFSM + D
Sbjct: 252 GSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSM-NHD 310

Query: 285 YVESFCPRLPNRH---AGPSR 338
           YV + CP   N +    GPSR
Sbjct: 311 YVNTLCPGTSNENNGSNGPSR 331


>ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|222853111|gb|EEE90658.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 27/144 (18%)
 Frame = +3

Query: 6   PCRSGYAIGVLIGNKLHLNPVCSAMQLRPSLRHLRSVDVV-----------MEEKPVV-- 146
           P  +GYA+GVLIGNKLHLNP+ + +QLRPS+ +L S +              E KP+   
Sbjct: 195 PPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGKKNATSGEDSNEGKPLGLP 254

Query: 147 -----------NKLEDSRDDWIRLSYNGARTDAAREYLHKMMAEEDSQIQFSMSSSDYVE 293
                       +  D  + WI L Y+G+++D +  YL  M+A E S I+F+M+  DY+ 
Sbjct: 255 KKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMS 314

Query: 294 SFCPRLPNRHA---GPSRSELLKL 356
           S CP + N +    GPSR  LL L
Sbjct: 315 SLCPGISNNNIKLNGPSRRVLLSL 338


>gb|ABU45189.1| unknown [Capsicum frutescens]
          Length = 629

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 53/137 (38%), Positives = 72/137 (52%), Gaps = 35/137 (25%)
 Frame = +3

Query: 9   CRSGYAIGVLIGNKLHLNPVCSAMQLRPSLRHLRSVDV-----------------VMEEK 137
           C SGYA+G+LIG+KLHLNPV + +QLRP+ +HL+  ++                 V E+K
Sbjct: 199 CTSGYAVGILIGDKLHLNPVHAVVQLRPARQHLKESELKKNNTTSNDEKSVENEDVKEKK 258

Query: 138 PVV---------NKLEDSRDDWIRLSYNGARTDAAREYLHKMMAEEDSQIQFSMSSS--- 281
           PV             +D   DW+ L Y+GAR+D +   L KM  EE SQ+ FSMS S   
Sbjct: 259 PVAPSKMQNKPPGNYKDVGKDWLHLKYHGARSDISARCLQKMAMEEGSQVPFSMSPSFSA 318

Query: 282 ------DYVESFCPRLP 314
                 DY+ + CP  P
Sbjct: 319 NLIHRVDYLNALCPGRP 335


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
           vinifera]
          Length = 672

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 54/136 (39%), Positives = 75/136 (55%), Gaps = 19/136 (13%)
 Frame = +3

Query: 6   PCRSGYAIGVLIGNKLHLNPVCSAMQLRPSLRHLRSV----------DVVMEEKPVVNKL 155
           P  +GY +GVL+GNKLHLNP+ + +QLRPS+ +L S           D     K  V+  
Sbjct: 188 PQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAVKLEVSNE 247

Query: 156 EDS-----RDDWIRLSYNGARTDAAREYLHKMMAEEDSQIQFSMSSSDYVESFCP----R 308
           E+S     +  W+ L Y+ + +D +  YL KM+AE++S IQF MS  +YV S CP     
Sbjct: 248 EESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSN 307

Query: 309 LPNRHAGPSRSELLKL 356
             NR  G SR  LL +
Sbjct: 308 DDNRSKGLSRRFLLSM 323